RNA–Protein interactions for RNA: ENST00000322213.8

SMC1A-201, Transcript of structural maintenance of chromosomes 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC1A, Length 9,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-201ENST00000322213 ANKRD39Q53RE8 183 aa6.23□□□□□ -1.41
SMC1A-201ENST00000322213 EID2BQ96D98 161 aa6.23□□□□□ -1.41
SMC1A-201ENST00000322213 RARRES3Q9UL19 164 aa6.23□□□□□ -1.41
SMC1A-201ENST00000322213 NPBWR2P48146 333 aa6.23□□□□□ -1.41
SMC1A-201ENST00000322213 NUFIP2Q7Z417 695 aaKnown RBP6.23□□□□□ -1.41
SMC1A-201ENST00000322213 ZNF547Q8IVP9 402 aa6.23□□□□□ -1.41
SMC1A-201ENST00000322213 MRGPRX3Q96LB0 322 aa6.23□□□□□ -1.41
SMC1A-201ENST00000322213 RARRES2Q99969 163 aa6.23□□□□□ -1.41
SMC1A-201ENST00000322213 C5orf66Q9H5L9 145 aa6.23□□□□□ -1.41
SMC1A-201ENST00000322213 SOD3P08294 240 aa6.23□□□□□ -1.41
SMC1A-201ENST00000322213 TCTAP57738 103 aa6.23□□□□□ -1.41
SMC1A-201ENST00000322213 SHBQ15464 509 aa6.23□□□□□ -1.41
SMC1A-201ENST00000322213 PYY3Q5JQD4 70 aa6.23□□□□□ -1.41
SMC1A-201ENST00000322213 C1orf185Q5T7R7 199 aa6.23□□□□□ -1.41
SMC1A-201ENST00000322213 TMEM164Q5U3C3 297 aa6.23□□□□□ -1.41
SMC1A-201ENST00000322213 TMEM251Q8N6I4 163 aa6.23□□□□□ -1.41
SMC1A-201ENST00000322213 AMER3Q8N944 861 aa6.23□□□□□ -1.41
SMC1A-201ENST00000322213 OR1L3Q8NH93 324 aa6.23□□□□□ -1.41
SMC1A-201ENST00000322213 AGAP20933 346 aa6.22□□□□□ -1.41
SMC1A-201ENST00000322213 TMEM50BP56557 158 aa6.22□□□□□ -1.41
SMC1A-201ENST00000322213 YPEL5P62699 121 aa6.22□□□□□ -1.41
SMC1A-201ENST00000322213 ZNF683Q8IZ20 524 aa6.22□□□□□ -1.41
SMC1A-201ENST00000322213 IL19Q9UHD0 177 aa6.22□□□□□ -1.41
SMC1A-201ENST00000322213 SF3B6Q9Y3B4 125 aaKnown RBP6.22□□□□□ -1.41
SMC1A-201ENST00000322213 LRRC3CA6NJW4 275 aa6.22□□□□□ -1.41
SMC1A-201ENST00000322213 SP1P08047 785 aa6.22□□□□□ -1.41
SMC1A-201ENST00000322213 RPS23P62266 143 aaKnown RBP6.22□□□□□ -1.41
SMC1A-201ENST00000322213 JOSD1Q15040 202 aaPredicted RBP6.22□□□□□ -1.41
SMC1A-201ENST00000322213 SMIM21Q3B7S5 101 aa6.22□□□□□ -1.41
SMC1A-201ENST00000322213 MRPL30Q8TCC3 161 aaKnown RBP6.22□□□□□ -1.41
SMC1A-201ENST00000322213 WFDC5Q8TCV5 224 aa6.22□□□□□ -1.41
SMC1A-201ENST00000322213 KCNS1Q96KK3 526 aa6.22□□□□□ -1.41
SMC1A-201ENST00000322213 EMC6Q9BV81 110 aa6.22□□□□□ -1.41
SMC1A-201ENST00000322213 RTL8AQ9BWD3 113 aa6.22□□□□□ -1.41
SMC1A-201ENST00000322213 AMY1AP04745 511 aa6.22□□□□□ -1.41
SMC1A-201ENST00000322213 PMELP40967 661 aa6.22□□□□□ -1.41
SMC1A-201ENST00000322213 CCR2P41597 374 aa6.22□□□□□ -1.41
SMC1A-201ENST00000322213 RPS27P42677 84 aaKnown RBP6.22□□□□□ -1.41
SMC1A-201ENST00000322213 PARM1Q6UWI2 310 aa6.22□□□□□ -1.41
SMC1A-201ENST00000322213 HEPN1Q6WQI6 88 aa6.22□□□□□ -1.41
SMC1A-201ENST00000322213 LINC00596Q86U02 117 aa6.22□□□□□ -1.41
SMC1A-201ENST00000322213 TMEM167BQ9NRX6 74 aa6.22□□□□□ -1.41
SMC1A-201ENST00000322213 CCL26Q9Y258 94 aa6.22□□□□□ -1.41
SMC1A-201ENST00000322213 SRSF10O75494 262 aaKnown RBP6.22□□□□□ -1.41
SMC1A-201ENST00000322213 CTSSP25774 331 aa6.22□□□□□ -1.41
SMC1A-201ENST00000322213 GJA4P35212 333 aa6.22□□□□□ -1.41
SMC1A-201ENST00000322213 PGFP49763 221 aa6.22□□□□□ -1.41
SMC1A-201ENST00000322213 EDDM3BP56851 147 aa6.22□□□□□ -1.41
SMC1A-201ENST00000322213 TMEM255AQ5JRV8 349 aa6.22□□□□□ -1.41
SMC1A-201ENST00000322213 SFRP2Q96HF1 295 aa6.22□□□□□ -1.41
SMC1A-201ENST00000322213 TIMM10BQ9Y5J6 103 aa6.22□□□□□ -1.41
SMC1A-201ENST00000322213 FAM221AA4D161 298 aa6.22□□□□□ -1.41
SMC1A-201ENST00000322213 MYADML2A6NDP7 307 aa6.22□□□□□ -1.41
SMC1A-201ENST00000322213 IL3RAP26951 378 aa6.22□□□□□ -1.41
SMC1A-201ENST00000322213 GALNSP34059 522 aa6.22□□□□□ -1.41
SMC1A-201ENST00000322213 COMPP49747 757 aaPredicted RBP6.22□□□□□ -1.41
SMC1A-201ENST00000322213 SSR4P51571 173 aa6.22□□□□□ -1.41
SMC1A-201ENST00000322213 LCN2P80188 198 aa6.22□□□□□ -1.41
SMC1A-201ENST00000322213 ZNF816Q0VGE8 651 aaPredicted RBP6.22□□□□□ -1.41
SMC1A-201ENST00000322213 BOKQ9UMX3 212 aaPredicted RBP6.22□□□□□ -1.41
SMC1A-201ENST00000322213 PPIL1Q9Y3C6 166 aa6.22□□□□□ -1.41
SMC1A-201ENST00000322213 SPINK4O60575 86 aa6.22□□□□□ -1.41
SMC1A-201ENST00000322213 EPPINO95925 133 aa6.22□□□□□ -1.41
SMC1A-201ENST00000322213 BCL3P20749 454 aa6.22□□□□□ -1.41
SMC1A-201ENST00000322213 EFNB2P52799 333 aa6.22□□□□□ -1.41
SMC1A-201ENST00000322213 Q1RN00 199 aa6.22□□□□□ -1.41
SMC1A-201ENST00000322213 SLC25A34Q6PIV7 304 aa6.22□□□□□ -1.41
SMC1A-201ENST00000322213 Q6ZNB5 142 aa6.22□□□□□ -1.41
SMC1A-201ENST00000322213 SOSTQ9BQB4 213 aa6.22□□□□□ -1.41
SMC1A-201ENST00000322213 LPAR5Q9H1C0 372 aa6.22□□□□□ -1.41
SMC1A-201ENST00000322213 HCFC1R1Q9NWW0 138 aa6.22□□□□□ -1.41
SMC1A-201ENST00000322213 CHST1O43916 411 aa6.22□□□□□ -1.41
SMC1A-201ENST00000322213 ARR3P36575 388 aa6.22□□□□□ -1.41
SMC1A-201ENST00000322213 KIR3DL2P43630 455 aa6.22□□□□□ -1.41
SMC1A-201ENST00000322213 RPS11P62280 158 aaKnown RBP eCLIP6.22□□□□□ -1.41
SMC1A-201ENST00000322213 SPNS2Q8IVW8 549 aa6.22□□□□□ -1.41
SMC1A-201ENST00000322213 MOB3AQ96BX8 217 aa6.22□□□□□ -1.41
SMC1A-201ENST00000322213 ZBP1Q9H171 429 aa6.22□□□□□ -1.41
SMC1A-201ENST00000322213 PRR13Q9NZ81 148 aa6.22□□□□□ -1.41
SMC1A-201ENST00000322213 MEX3AA1L020 520 aaKnown RBP6.22□□□□□ -1.41
SMC1A-201ENST00000322213 H0YL77 283 aa6.22□□□□□ -1.41
SMC1A-201ENST00000322213 LDLRAD4O15165 306 aa6.22□□□□□ -1.41
SMC1A-201ENST00000322213 CEBPDP49716 269 aaPredicted RBP6.22□□□□□ -1.41
SMC1A-201ENST00000322213 SUMO3P55854 103 aaPredicted RBP6.22□□□□□ -1.41
SMC1A-201ENST00000322213 ZNF141Q15928 474 aa6.22□□□□□ -1.41
SMC1A-201ENST00000322213 TMEM52BQ4KMG9 183 aa6.22□□□□□ -1.41
SMC1A-201ENST00000322213 PRSS3P2Q8NHM4 247 aa6.22□□□□□ -1.41
SMC1A-201ENST00000322213 SLC25A38Q96DW6 304 aa6.22□□□□□ -1.41
SMC1A-201ENST00000322213 NEU1Q99519 415 aa6.22□□□□□ -1.41
SMC1A-201ENST00000322213 MRPL18Q9H0U6 180 aaKnown RBP6.22□□□□□ -1.41
SMC1A-201ENST00000322213 FGF5P12034 268 aa6.21□□□□□ -1.41
SMC1A-201ENST00000322213 CYBAP13498 195 aa6.21□□□□□ -1.41
SMC1A-201ENST00000322213 CDKN1BP46527 198 aa6.21□□□□□ -1.41
SMC1A-201ENST00000322213 NOGQ13253 232 aa6.21□□□□□ -1.41
SMC1A-201ENST00000322213 HIST1H2BLQ99880 126 aa6.21□□□□□ -1.41
SMC1A-201ENST00000322213 TAAR3PQ9P1P4 343 aa6.21□□□□□ -1.41
SMC1A-201ENST00000322213 TIMM8AO60220 97 aaPredicted RBP6.21□□□□□ -1.41
SMC1A-201ENST00000322213 ZNF774Q6NX45 483 aa6.21□□□□□ -1.41
SMC1A-201ENST00000322213 D2HGDHQ8N465 521 aa6.21□□□□□ -1.41
SMC1A-201ENST00000322213 ASB10Q8WXI3 467 aa6.21□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms