RNA–Protein interactions for RNA: ENST00000316763.7

VRK3-201, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK3, Length 1,938 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-201ENST00000316763 UBE2J1Q9Y385 318 aaPredicted RBP12.07□□□□□ -0.48
VRK3-201ENST00000316763 TRDCB7Z8K6 153 aa12.07□□□□□ -0.48
VRK3-201ENST00000316763 GPR31O00270 319 aa12.07□□□□□ -0.48
VRK3-201ENST00000316763 SIGLEC5O15389 551 aa12.07□□□□□ -0.48
VRK3-201ENST00000316763 FBXO24O75426 580 aa12.07□□□□□ -0.48
VRK3-201ENST00000316763 CDS2O95674 445 aa12.07□□□□□ -0.48
VRK3-201ENST00000316763 PRKACAP17612 351 aa12.07□□□□□ -0.48
VRK3-201ENST00000316763 CEACAM8P31997 349 aaPredicted RBP12.07□□□□□ -0.48
VRK3-201ENST00000316763 TGFBR3Q03167 851 aa12.07□□□□□ -0.48
VRK3-201ENST00000316763 RBPJQ06330 500 aa12.07□□□□□ -0.48
VRK3-201ENST00000316763 HIKESHIQ53FT3 197 aa12.07□□□□□ -0.48
VRK3-201ENST00000316763 SPIN3Q5JUX0 258 aa12.07□□□□□ -0.48
VRK3-201ENST00000316763 C10orf91Q5T1B1 145 aa12.07□□□□□ -0.48
VRK3-201ENST00000316763 MEX3BQ6ZN04 569 aaKnown RBP12.07□□□□□ -0.48
VRK3-201ENST00000316763 DOLPP1Q86YN1 238 aa12.07□□□□□ -0.48
VRK3-201ENST00000316763 OR4A4PQ8NGN8 299 aa12.07□□□□□ -0.48
VRK3-201ENST00000316763 SPIN2AQ99865 258 aa12.07□□□□□ -0.48
VRK3-201ENST00000316763 SPIN2BQ9BPZ2 258 aa12.07□□□□□ -0.48
VRK3-201ENST00000316763 SMIM3Q9BZL3 60 aa12.07□□□□□ -0.48
VRK3-201ENST00000316763 TMEM222Q9H0R3 208 aa12.07□□□□□ -0.48
VRK3-201ENST00000316763 RHOFQ9HBH0 211 aa12.07□□□□□ -0.48
VRK3-201ENST00000316763 FAM212BQ9NTI7 297 aaPredicted RBP12.07□□□□□ -0.48
VRK3-201ENST00000316763 CRIM1Q9NZV1 1036 aa12.07□□□□□ -0.48
VRK3-201ENST00000316763 CARHSP1Q9Y2V2 147 aaKnown RBP12.07□□□□□ -0.48
VRK3-201ENST00000316763 POMT1Q9Y6A1 747 aa12.07□□□□□ -0.48
VRK3-201ENST00000316763 RP1L1Q8IWN7 2480 aaPredicted RBP12.07□□□□□ -0.48
VRK3-201ENST00000316763 PRRG2O14669 202 aa12.06□□□□□ -0.48
VRK3-201ENST00000316763 GLI4P10075 376 aa12.06□□□□□ -0.48
VRK3-201ENST00000316763 F2RL1P55085 397 aa12.06□□□□□ -0.48
VRK3-201ENST00000316763 TLE1Q04724 770 aa12.06□□□□□ -0.48
VRK3-201ENST00000316763 HAGHLQ6PII5 290 aaPredicted RBP12.06□□□□□ -0.48
VRK3-201ENST00000316763 ZNF695Q8IW36 515 aa12.06□□□□□ -0.48
VRK3-201ENST00000316763 SECTM1Q8WVN6 248 aa12.06□□□□□ -0.48
VRK3-201ENST00000316763 TP53RKQ96S44 253 aa12.06□□□□□ -0.48
VRK3-201ENST00000316763 SEC11CQ9BY50 192 aa12.06□□□□□ -0.48
VRK3-201ENST00000316763 UQCC1Q9NVA1 299 aa12.06□□□□□ -0.48
VRK3-201ENST00000316763 ATP23Q9Y6H3 246 aa12.06□□□□□ -0.48
VRK3-201ENST00000316763 NBASA2RRP1 2371 aa12.06□□□□□ -0.48
VRK3-201ENST00000316763 SYNGR1O43759 233 aa12.05□□□□□ -0.48
VRK3-201ENST00000316763 S100GP29377 79 aa12.05□□□□□ -0.48
VRK3-201ENST00000316763 GNRHRP30968 328 aa12.05□□□□□ -0.48
VRK3-201ENST00000316763 LPAR6P43657 344 aa12.05□□□□□ -0.48
VRK3-201ENST00000316763 TBC1D26Q86UD7 250 aa12.05□□□□□ -0.48
VRK3-201ENST00000316763 LDLRAD3Q86YD5 345 aa12.05□□□□□ -0.48
VRK3-201ENST00000316763 SLC35G3Q8N808 338 aa12.05□□□□□ -0.48
VRK3-201ENST00000316763 C1orf162Q8NEQ5 155 aaPredicted RBP12.05□□□□□ -0.48
VRK3-201ENST00000316763 OR52M1Q8NGK5 317 aa12.05□□□□□ -0.48
VRK3-201ENST00000316763 PKIBQ9C010 78 aa12.05□□□□□ -0.48
VRK3-201ENST00000316763 ARV1Q9H2C2 271 aa12.05□□□□□ -0.48
VRK3-201ENST00000316763 TINAGQ9UJW2 476 aa12.05□□□□□ -0.48
VRK3-201ENST00000316763 PROCRQ9UNN8 238 aa12.05□□□□□ -0.48
VRK3-201ENST00000316763 RCL1Q9Y2P8 373 aaKnown RBP12.05□□□□□ -0.48
VRK3-201ENST00000316763 CFAP46Q8IYW2 2715 aa12.05□□□□□ -0.48
VRK3-201ENST00000316763 ARID1AO14497 2285 aa12.05□□□□□ -0.48
VRK3-201ENST00000316763 DUXBA0A1W2PPF3 345 aa12.05□□□□□ -0.48
VRK3-201ENST00000316763 J3QW42 95 aa12.05□□□□□ -0.48
VRK3-201ENST00000316763 SNAPINO95295 136 aa12.05□□□□□ -0.48
VRK3-201ENST00000316763 SCTP09683 121 aa12.05□□□□□ -0.48
VRK3-201ENST00000316763 SEC11BP0C7V7 166 aa12.05□□□□□ -0.48
VRK3-201ENST00000316763 HOXB1P14653 301 aaPredicted RBP12.05□□□□□ -0.48
VRK3-201ENST00000316763 PVALBP20472 110 aaPredicted RBP12.05□□□□□ -0.48
VRK3-201ENST00000316763 IL32P24001 234 aa12.05□□□□□ -0.48
VRK3-201ENST00000316763 WNT5AP41221 380 aa12.05□□□□□ -0.48
VRK3-201ENST00000316763 KCNJ3P48549 501 aa12.05□□□□□ -0.48
VRK3-201ENST00000316763 IL24Q13007 206 aa12.05□□□□□ -0.48
VRK3-201ENST00000316763 MRPL49Q13405 166 aaKnown RBP12.05□□□□□ -0.48
VRK3-201ENST00000316763 IGFBP7Q16270 282 aa12.05□□□□□ -0.48
VRK3-201ENST00000316763 GABRA6Q16445 453 aa12.05□□□□□ -0.48
VRK3-201ENST00000316763 TBC1D28Q2M2D7 210 aa12.05□□□□□ -0.48
VRK3-201ENST00000316763 BTNL8Q6UX41 500 aa12.05□□□□□ -0.48
VRK3-201ENST00000316763 FAM58AQ8N1B3 248 aa12.05□□□□□ -0.48
VRK3-201ENST00000316763 ZNF610Q8N9Z0 462 aa12.05□□□□□ -0.48
VRK3-201ENST00000316763 SUMF2Q8NBJ7 301 aa12.05□□□□□ -0.48
VRK3-201ENST00000316763 CLRN3Q8NCR9 226 aa12.05□□□□□ -0.48
VRK3-201ENST00000316763 OR4D5Q8NGN0 318 aa12.05□□□□□ -0.48
VRK3-201ENST00000316763 ERGIC1Q969X5 290 aa12.05□□□□□ -0.48
VRK3-201ENST00000316763 TMEM56Q96MV1 263 aa12.05□□□□□ -0.48
VRK3-201ENST00000316763 TMEM56-RWDD3S4R434 201 aa12.05□□□□□ -0.48
VRK3-201ENST00000316763 POLEQ07864 2286 aa12.05□□□□□ -0.48
VRK3-201ENST00000316763 TRBV6-6A0A0A6YYG2 114 aa12.04□□□□□ -0.48
VRK3-201ENST00000316763 PIGBOS1A0A0B4J2F0 54 aa12.04□□□□□ -0.48
VRK3-201ENST00000316763 FAM74A7A6NL05 159 aa12.04□□□□□ -0.48
VRK3-201ENST00000316763 TOR1AO14656 332 aa12.04□□□□□ -0.48
VRK3-201ENST00000316763 TUSC2O75896 110 aa12.04□□□□□ -0.48
VRK3-201ENST00000316763 LYZL6O75951 148 aa12.04□□□□□ -0.48
VRK3-201ENST00000316763 SRSF3P84103 164 aaKnown RBP12.04□□□□□ -0.48
VRK3-201ENST00000316763 P2RY6Q15077 328 aa12.04□□□□□ -0.48
VRK3-201ENST00000316763 FAM74A3Q4VXF1 159 aa12.04□□□□□ -0.48
VRK3-201ENST00000316763 FAM122CQ6P4D5 195 aa12.04□□□□□ -0.48
VRK3-201ENST00000316763 MDP1Q86V88 176 aa12.04□□□□□ -0.48
VRK3-201ENST00000316763 CMTM1Q8IZ96 169 aa12.04□□□□□ -0.48
VRK3-201ENST00000316763 PUSL1Q8N0Z8 303 aaKnown RBP12.04□□□□□ -0.48
VRK3-201ENST00000316763 ABHD14BQ96IU4 210 aa12.04□□□□□ -0.48
VRK3-201ENST00000316763 HS3ST6Q96QI5 342 aa12.04□□□□□ -0.48
VRK3-201ENST00000316763 SFXN3Q9BWM7 321 aa12.04□□□□□ -0.48
VRK3-201ENST00000316763 SH3BGRL2Q9UJC5 107 aa12.04□□□□□ -0.48
VRK3-201ENST00000316763 CHD6Q8TD26 2715 aa12.04□□□□□ -0.48
VRK3-201ENST00000316763 FAM208BQ5VWN6 2430 aa12.04□□□□□ -0.48
VRK3-201ENST00000316763 RNASEK-C17orf49H0YIS7 233 aa12.03□□□□□ -0.48
VRK3-201ENST00000316763 TRIM77I1YAP6 450 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms