RNA–Protein interactions for RNA: ENST00000316308.8

CLK4-201, Transcript of CDC like kinase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK4, Length 2,568 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-201ENST00000316308 ZNF695Q8IW36 515 aa12.52□□□□□ -0.41
CLK4-201ENST00000316308 TMEM178AQ8NBL3 297 aa12.52□□□□□ -0.41
CLK4-201ENST00000316308 C11orf1Q9H5F2 150 aa12.52□□□□□ -0.41
CLK4-201ENST00000316308 CST7O76096 145 aa12.51□□□□□ -0.41
CLK4-201ENST00000316308 SLC34A2O95436 690 aa12.51□□□□□ -0.41
CLK4-201ENST00000316308 OR2H2O95918 312 aa12.51□□□□□ -0.41
CLK4-201ENST00000316308 EPHA1P21709 976 aa12.51□□□□□ -0.41
CLK4-201ENST00000316308 CAV2P51636 162 aa12.51□□□□□ -0.41
CLK4-201ENST00000316308 ALKBH2Q6NS38 261 aa12.51□□□□□ -0.41
CLK4-201ENST00000316308 ZNF573Q86YE8 665 aa12.51□□□□□ -0.41
CLK4-201ENST00000316308 NRIP2Q9BQI9 281 aa12.51□□□□□ -0.41
CLK4-201ENST00000316308 MPC1Q9Y5U8 109 aa12.51□□□□□ -0.41
CLK4-201ENST00000316308 CHD3Q12873 2000 aaKnown RBP12.51□□□□□ -0.41
CLK4-201ENST00000316308 TOR1AO14656 332 aa12.51□□□□□ -0.41
CLK4-201ENST00000316308 TAAR5O14804 337 aa12.51□□□□□ -0.41
CLK4-201ENST00000316308 DEGS1O15121 323 aa12.51□□□□□ -0.41
CLK4-201ENST00000316308 PGLYRP1O75594 196 aaPredicted RBP12.51□□□□□ -0.41
CLK4-201ENST00000316308 JTBO76095 146 aa12.51□□□□□ -0.41
CLK4-201ENST00000316308 PMELP40967 661 aa12.51□□□□□ -0.41
CLK4-201ENST00000316308 AKR1C3P42330 323 aa12.51□□□□□ -0.41
CLK4-201ENST00000316308 KIR2DL2P43627 348 aaPredicted RBP12.51□□□□□ -0.41
CLK4-201ENST00000316308 EWSR1Q01844 656 aaKnown RBP eCLIP12.51□□□□□ -0.41
CLK4-201ENST00000316308 IL24Q13007 206 aa12.51□□□□□ -0.41
CLK4-201ENST00000316308 UQCC3Q6UW78 93 aa12.51□□□□□ -0.41
CLK4-201ENST00000316308 Q6ZRM9 215 aa12.51□□□□□ -0.41
CLK4-201ENST00000316308 Q6ZS49 121 aa12.51□□□□□ -0.41
CLK4-201ENST00000316308 TMEM217Q8N7C4 229 aa12.51□□□□□ -0.41
CLK4-201ENST00000316308 CCDC71LQ8N9Z2 235 aa12.51□□□□□ -0.41
CLK4-201ENST00000316308 UBAC2Q8NBM4 344 aa12.51□□□□□ -0.41
CLK4-201ENST00000316308 OR1J1Q8NGS3 322 aa12.51□□□□□ -0.41
CLK4-201ENST00000316308 GMPPAQ96IJ6 420 aaPredicted RBP12.51□□□□□ -0.41
CLK4-201ENST00000316308 BOD1Q96IK1 185 aa12.51□□□□□ -0.41
CLK4-201ENST00000316308 GLRX2Q9NS18 164 aa12.51□□□□□ -0.41
CLK4-201ENST00000316308 OR14J1Q9UGF5 321 aa12.51□□□□□ -0.41
CLK4-201ENST00000316308 MUC6Q6W4X9 2439 aa12.5□□□□□ -0.41
CLK4-201ENST00000316308 ATP6V1G2-DDX39BF2Z307 99 aa12.5□□□□□ -0.41
CLK4-201ENST00000316308 H3BP45 60 aa12.5□□□□□ -0.41
CLK4-201ENST00000316308 CDS2O95674 445 aa12.5□□□□□ -0.41
CLK4-201ENST00000316308 PSG2P11465 335 aa12.5□□□□□ -0.41
CLK4-201ENST00000316308 GABRA6Q16445 453 aa12.5□□□□□ -0.41
CLK4-201ENST00000316308 TBC1D28Q2M2D7 210 aa12.5□□□□□ -0.41
CLK4-201ENST00000316308 CCDC36Q8IYA8 594 aa12.5□□□□□ -0.41
CLK4-201ENST00000316308 TMEM56Q96MV1 263 aa12.5□□□□□ -0.41
CLK4-201ENST00000316308 TMED3Q9Y3Q3 217 aa12.5□□□□□ -0.41
CLK4-201ENST00000316308 TMEM56-RWDD3S4R434 201 aa12.5□□□□□ -0.41
CLK4-201ENST00000316308 PCNX1Q96RV3 2341 aa12.5□□□□□ -0.41
CLK4-201ENST00000316308 DOCK11Q5JSL3 2073 aa12.5□□□□□ -0.41
CLK4-201ENST00000316308 FAM157AC9JC47 383 aa12.5□□□□□ -0.41
CLK4-201ENST00000316308 RNASEK-C17orf49H0YIS7 233 aa12.5□□□□□ -0.41
CLK4-201ENST00000316308 MLNRO43193 412 aa12.5□□□□□ -0.41
CLK4-201ENST00000316308 PSPNO60542 156 aa12.5□□□□□ -0.41
CLK4-201ENST00000316308 SFTA3P0C7M3 94 aa12.5□□□□□ -0.41
CLK4-201ENST00000316308 ZNF616Q08AN1 781 aa12.5□□□□□ -0.41
CLK4-201ENST00000316308 DEFB109BQ30KR1 87 aa12.5□□□□□ -0.41
CLK4-201ENST00000316308 MIDNQ504T8 468 aa12.5□□□□□ -0.41
CLK4-201ENST00000316308 AKIRIN2Q53H80 203 aa12.5□□□□□ -0.41
CLK4-201ENST00000316308 NMSQ5H8A3 153 aa12.5□□□□□ -0.41
CLK4-201ENST00000316308 TAAR6Q96RI8 345 aa12.5□□□□□ -0.41
CLK4-201ENST00000316308 PLEKHA2Q9HB19 425 aa12.5□□□□□ -0.41
CLK4-201ENST00000316308 FAM86C1Q9NVL1 165 aa12.5□□□□□ -0.41
CLK4-201ENST00000316308 TAAR3PQ9P1P4 343 aa12.5□□□□□ -0.41
CLK4-201ENST00000316308 GLS2Q9UI32 602 aa12.5□□□□□ -0.41
CLK4-201ENST00000316308 POMT1Q9Y6A1 747 aa12.5□□□□□ -0.41
CLK4-201ENST00000316308 CEP295Q9C0D2 2601 aa12.49□□□□□ -0.41
CLK4-201ENST00000316308 OR5B21A6NL26 309 aa12.49□□□□□ -0.41
CLK4-201ENST00000316308 GPR137BO60478 399 aa12.49□□□□□ -0.41
CLK4-201ENST00000316308 IGKV1-39P01597 117 aa12.49□□□□□ -0.41
CLK4-201ENST00000316308 GAPDHP04406 335 aaKnown RBP12.49□□□□□ -0.41
CLK4-201ENST00000316308 IGKV1D-39P04432 117 aa12.49□□□□□ -0.41
CLK4-201ENST00000316308 NKX2-1P43699 371 aaPredicted RBP12.49□□□□□ -0.41
CLK4-201ENST00000316308 Q6ZR03 302 aa12.49□□□□□ -0.41
CLK4-201ENST00000316308 FAM214BQ7L5A3 538 aa12.49□□□□□ -0.41
CLK4-201ENST00000316308 TPRX1Q8N7U7 411 aa12.49□□□□□ -0.41
CLK4-201ENST00000316308 LUZP4Q9P127 313 aa12.49□□□□□ -0.41
CLK4-201ENST00000316308 FBXO9Q9UK97 447 aaPredicted RBP12.49□□□□□ -0.41
CLK4-201ENST00000316308 PPP1R3CQ9UQK1 317 aa12.49□□□□□ -0.41
CLK4-201ENST00000316308 PLCE1Q9P212 2302 aa12.49□□□□□ -0.41
CLK4-201ENST00000316308 ACACAQ13085 2346 aa12.49□□□□□ -0.41
CLK4-201ENST00000316308 J3QT63 122 aa12.49□□□□□ -0.41
CLK4-201ENST00000316308 UCP2P55851 309 aa12.49□□□□□ -0.41
CLK4-201ENST00000316308 UBE2NP61088 152 aaKnown RBP12.49□□□□□ -0.41
CLK4-201ENST00000316308 TESK1Q15569 626 aa12.49□□□□□ -0.41
CLK4-201ENST00000316308 C10orf91Q5T1B1 145 aa12.49□□□□□ -0.41
CLK4-201ENST00000316308 ZNF295-AS1Q8N0V1 137 aa12.49□□□□□ -0.41
CLK4-201ENST00000316308 RPRMLQ8N4K4 120 aa12.49□□□□□ -0.41
CLK4-201ENST00000316308 OR2C3Q8N628 320 aa12.49□□□□□ -0.41
CLK4-201ENST00000316308 KLF14Q8TD94 323 aaPredicted RBP12.49□□□□□ -0.41
CLK4-201ENST00000316308 AKR1E2Q96JD6 320 aa12.49□□□□□ -0.41
CLK4-201ENST00000316308 ARV1Q9H2C2 271 aa12.49□□□□□ -0.41
CLK4-201ENST00000316308 MSL2Q9HCI7 577 aa12.49□□□□□ -0.41
CLK4-201ENST00000316308 UFSP2Q9NUQ7 469 aa12.49□□□□□ -0.41
CLK4-201ENST00000316308 KIR2DS1A0A191URI9 304 aa12.48□□□□□ -0.41
CLK4-201ENST00000316308 KIR2DS4P43632 304 aa12.48□□□□□ -0.41
CLK4-201ENST00000316308 LINC00205P59089 165 aa12.48□□□□□ -0.41
CLK4-201ENST00000316308 ERVK11-1P61568 191 aa12.48□□□□□ -0.41
CLK4-201ENST00000316308 HLA-DRB3P79483 266 aa12.48□□□□□ -0.41
CLK4-201ENST00000316308 RUNX1Q01196 453 aa12.48□□□□□ -0.41
CLK4-201ENST00000316308 KIR2DS1Q14954 304 aa12.48□□□□□ -0.41
CLK4-201ENST00000316308 FAM76BQ5HYJ3 339 aa12.48□□□□□ -0.41
CLK4-201ENST00000316308 PRAMEF6Q5VXH4 476 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms