RNA–Protein interactions for RNA: ENST00000315962.8

TRIM55-202, Transcript of tripartite motif containing 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM55, Length 2,914 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-202ENST00000315962 BMP5P22003 454 aa6.5□□□□□ -1.37
TRIM55-202ENST00000315962 CFPP27918 469 aa6.5□□□□□ -1.37
TRIM55-202ENST00000315962 CCL20P78556 96 aa6.5□□□□□ -1.37
TRIM55-202ENST00000315962 VHLLQ6RSH7 139 aa6.5□□□□□ -1.37
TRIM55-202ENST00000315962 BTNL8Q6UX41 500 aa6.5□□□□□ -1.37
TRIM55-202ENST00000315962 IL34Q6ZMJ4 242 aa6.5□□□□□ -1.37
TRIM55-202ENST00000315962 PRR18Q8N4B5 295 aa6.5□□□□□ -1.37
TRIM55-202ENST00000315962 OR52M1Q8NGK5 317 aa6.5□□□□□ -1.37
TRIM55-202ENST00000315962 HPSE2Q8WWQ2 592 aa6.5□□□□□ -1.37
TRIM55-202ENST00000315962 AQP10Q96PS8 301 aa6.5□□□□□ -1.37
TRIM55-202ENST00000315962 C1QTNF5Q9BXJ0 243 aa6.5□□□□□ -1.37
TRIM55-202ENST00000315962 MAGT1Q9H0U3 335 aa6.5□□□□□ -1.37
TRIM55-202ENST00000315962 METTL9Q9H1A3 318 aa6.5□□□□□ -1.37
TRIM55-202ENST00000315962 AK3Q9UIJ7 227 aa6.5□□□□□ -1.37
TRIM55-202ENST00000315962 PLCE1Q9P212 2302 aa6.5□□□□□ -1.37
TRIM55-202ENST00000315962 CHD3Q12873 2000 aaKnown RBP6.5□□□□□ -1.37
TRIM55-202ENST00000315962 PTPRBP23467 1997 aa6.5□□□□□ -1.37
TRIM55-202ENST00000315962 TRBV6-7A0A0A0MS04 114 aa6.5□□□□□ -1.37
TRIM55-202ENST00000315962 ZNF816-ZNF321PA0A0X1KG74 233 aa6.5□□□□□ -1.37
TRIM55-202ENST00000315962 PQLC2LA1A4F0 135 aa6.5□□□□□ -1.37
TRIM55-202ENST00000315962 CD300LBA8K4G0 201 aa6.5□□□□□ -1.37
TRIM55-202ENST00000315962 FAM157AC9JC47 383 aa6.5□□□□□ -1.37
TRIM55-202ENST00000315962 H0YL77 283 aa6.5□□□□□ -1.37
TRIM55-202ENST00000315962 MFNGO00587 321 aa6.5□□□□□ -1.37
TRIM55-202ENST00000315962 GRPP07492 148 aa6.5□□□□□ -1.37
TRIM55-202ENST00000315962 OR5AC1P0C628 307 aa6.5□□□□□ -1.37
TRIM55-202ENST00000315962 FPR2P25090 351 aa6.5□□□□□ -1.37
TRIM55-202ENST00000315962 RPS10P46783 165 aaKnown RBP6.5□□□□□ -1.37
TRIM55-202ENST00000315962 TAS2R31P59538 309 aa6.5□□□□□ -1.37
TRIM55-202ENST00000315962 MALLQ13021 153 aa6.5□□□□□ -1.37
TRIM55-202ENST00000315962 GUK1Q16774 197 aa6.5□□□□□ -1.37
TRIM55-202ENST00000315962 HAGHQ16775 308 aa6.5□□□□□ -1.37
TRIM55-202ENST00000315962 C22orf34Q6ZV56 151 aa6.5□□□□□ -1.37
TRIM55-202ENST00000315962 SEM1Q6ZVN7 128 aa6.5□□□□□ -1.37
TRIM55-202ENST00000315962 NEK7Q8TDX7 302 aa6.5□□□□□ -1.37
TRIM55-202ENST00000315962 ASB13Q8WXK3 278 aa6.5□□□□□ -1.37
TRIM55-202ENST00000315962 RDH5Q92781 318 aa6.5□□□□□ -1.37
TRIM55-202ENST00000315962 BCL2L2Q92843 193 aaPredicted RBP6.5□□□□□ -1.37
TRIM55-202ENST00000315962 MARS2Q96GW9 593 aaKnown RBP6.5□□□□□ -1.37
TRIM55-202ENST00000315962 REPIN1Q9BWE0 567 aaKnown RBP6.5□□□□□ -1.37
TRIM55-202ENST00000315962 ZNF442Q9H7R0 627 aa6.5□□□□□ -1.37
TRIM55-202ENST00000315962 MSL2Q9HCI7 577 aa6.5□□□□□ -1.37
TRIM55-202ENST00000315962 RAB18Q9NP72 206 aa6.5□□□□□ -1.37
TRIM55-202ENST00000315962 TINAGQ9UJW2 476 aa6.5□□□□□ -1.37
TRIM55-202ENST00000315962 C14orf166Q9Y224 244 aaKnown RBP6.5□□□□□ -1.37
TRIM55-202ENST00000315962 TP53TG5Q9Y2B4 290 aa6.5□□□□□ -1.37
TRIM55-202ENST00000315962 C5orf52A6NGY3 159 aa6.49□□□□□ -1.37
TRIM55-202ENST00000315962 PIGPP57054 158 aa6.49□□□□□ -1.37
TRIM55-202ENST00000315962 CYCSP99999 105 aaKnown RBP6.49□□□□□ -1.37
TRIM55-202ENST00000315962 ZNF124Q15973 351 aa6.49□□□□□ -1.37
TRIM55-202ENST00000315962 RBMXL3Q8N7X1 1067 aaKnown RBP6.49□□□□□ -1.37
TRIM55-202ENST00000315962 ZNF565Q8N9K5 539 aa6.49□□□□□ -1.37
TRIM55-202ENST00000315962 GMPPAQ96IJ6 420 aaPredicted RBP6.49□□□□□ -1.37
TRIM55-202ENST00000315962 CNTNAP3Q9BZ76 1288 aa6.49□□□□□ -1.37
TRIM55-202ENST00000315962 LINC00470Q9BZP3 86 aa6.49□□□□□ -1.37
TRIM55-202ENST00000315962 UFSP2Q9NUQ7 469 aa6.49□□□□□ -1.37
TRIM55-202ENST00000315962 PPP1R14DQ9NXH3 145 aa6.49□□□□□ -1.37
TRIM55-202ENST00000315962 MTCH1Q9NZJ7 389 aa6.49□□□□□ -1.37
TRIM55-202ENST00000315962 RPL36A-HNRNPH2H7BZ11 118 aa6.49□□□□□ -1.37
TRIM55-202ENST00000315962 IFNA2P01563 188 aa6.49□□□□□ -1.37
TRIM55-202ENST00000315962 MBPP02686 304 aaPredicted RBP6.49□□□□□ -1.37
TRIM55-202ENST00000315962 CD5P06127 495 aa6.49□□□□□ -1.37
TRIM55-202ENST00000315962 CHRM2P08172 466 aa6.49□□□□□ -1.37
TRIM55-202ENST00000315962 SULT1A1P50225 295 aa6.49□□□□□ -1.37
TRIM55-202ENST00000315962 SULT1A2P50226 295 aa6.49□□□□□ -1.37
TRIM55-202ENST00000315962 RTP5Q14D33 572 aa6.49□□□□□ -1.37
TRIM55-202ENST00000315962 CNN3Q15417 329 aaKnown RBP6.49□□□□□ -1.37
TRIM55-202ENST00000315962 OR8B8Q15620 311 aa6.49□□□□□ -1.37
TRIM55-202ENST00000315962 C4orf17Q53FE4 359 aa6.49□□□□□ -1.37
TRIM55-202ENST00000315962 GFI1BQ5VTD9 330 aa6.49□□□□□ -1.37
TRIM55-202ENST00000315962 RPUSD3Q6P087 351 aaKnown RBP6.49□□□□□ -1.37
TRIM55-202ENST00000315962 ZNF826PQ6ZT77 177 aa6.49□□□□□ -1.37
TRIM55-202ENST00000315962 TMEM217Q8N7C4 229 aa6.49□□□□□ -1.37
TRIM55-202ENST00000315962 APOBEC3DQ96AK3 386 aaPredicted RBP6.49□□□□□ -1.37
TRIM55-202ENST00000315962 PRRX2Q99811 253 aa6.49□□□□□ -1.37
TRIM55-202ENST00000315962 TREM2Q9NZC2 230 aa6.49□□□□□ -1.37
TRIM55-202ENST00000315962 CLCF1Q9UBD9 225 aa6.49□□□□□ -1.37
TRIM55-202ENST00000315962 DUSP13Q9UII6 198 aa6.49□□□□□ -1.37
TRIM55-202ENST00000315962 OSGIN2Q9Y236 505 aa6.49□□□□□ -1.37
TRIM55-202ENST00000315962 SPTBN1Q01082 2364 aaKnown RBP6.49□□□□□ -1.37
TRIM55-202ENST00000315962 H7C1Q1 480 aa6.49□□□□□ -1.37
TRIM55-202ENST00000315962 CDIPTO14735 213 aa6.49□□□□□ -1.37
TRIM55-202ENST00000315962 GFRA3O60609 400 aa6.49□□□□□ -1.37
TRIM55-202ENST00000315962 RAB5AP20339 215 aa6.49□□□□□ -1.37
TRIM55-202ENST00000315962 ARR3P36575 388 aa6.49□□□□□ -1.37
TRIM55-202ENST00000315962 MPV17P39210 176 aa6.49□□□□□ -1.37
TRIM55-202ENST00000315962 CEBPDP49716 269 aaPredicted RBP6.49□□□□□ -1.37
TRIM55-202ENST00000315962 DVL1P1P54792 670 aaPredicted RBP6.49□□□□□ -1.37
TRIM55-202ENST00000315962 NDUFA6P56556 154 aa6.49□□□□□ -1.37
TRIM55-202ENST00000315962 RUNX1Q01196 453 aa6.49□□□□□ -1.37
TRIM55-202ENST00000315962 NAAAQ02083 359 aa6.49□□□□□ -1.37
TRIM55-202ENST00000315962 ACSF3Q4G176 576 aaPredicted RBP6.49□□□□□ -1.37
TRIM55-202ENST00000315962 ACTBL2Q562R1 376 aa6.49□□□□□ -1.37
TRIM55-202ENST00000315962 TMEM268Q5VZI3 342 aa6.49□□□□□ -1.37
TRIM55-202ENST00000315962 FAHD2BQ6P2I3 314 aaPredicted RBP6.49□□□□□ -1.37
TRIM55-202ENST00000315962 Q6ZPA2 131 aa6.49□□□□□ -1.37
TRIM55-202ENST00000315962 SPACA3Q8IXA5 215 aa6.49□□□□□ -1.37
TRIM55-202ENST00000315962 OSR2Q8N2R0 312 aa6.49□□□□□ -1.37
TRIM55-202ENST00000315962 DMBX1Q8NFW5 382 aa6.49□□□□□ -1.37
TRIM55-202ENST00000315962 OR1J1Q8NGS3 322 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms