RNA–Protein interactions for RNA: ENST00000315869.7

TFE3-201, Transcript of transcription factor binding to IGHM enhancer 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TFE3, Length 3,415 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFE3-201ENST00000315869 HMGB3O15347 200 aaKnown RBP12.79□□□□□ -0.36
TFE3-201ENST00000315869 CDS2O95674 445 aa12.79□□□□□ -0.36
TFE3-201ENST00000315869 DUSP3P51452 185 aaPredicted RBP12.79□□□□□ -0.36
TFE3-201ENST00000315869 ELLP55199 621 aaPredicted RBP12.79□□□□□ -0.36
TFE3-201ENST00000315869 NKX6-1P78426 367 aaPredicted RBP12.79□□□□□ -0.36
TFE3-201ENST00000315869 PRDX4Q13162 271 aa12.79□□□□□ -0.36
TFE3-201ENST00000315869 TMEM211Q6ICI0 200 aa12.79□□□□□ -0.36
TFE3-201ENST00000315869 OR4D5Q8NGN0 318 aa12.79□□□□□ -0.36
TFE3-201ENST00000315869 LYPD6BQ8NI32 183 aa12.79□□□□□ -0.36
TFE3-201ENST00000315869 RNF138Q8WVD3 245 aa12.79□□□□□ -0.36
TFE3-201ENST00000315869 PSMF1Q92530 271 aa12.79□□□□□ -0.36
TFE3-201ENST00000315869 RSG1Q9BU20 258 aa12.79□□□□□ -0.36
TFE3-201ENST00000315869 EGLN1Q9GZT9 426 aa12.79□□□□□ -0.36
TFE3-201ENST00000315869 DOK5Q9P104 306 aa12.79□□□□□ -0.36
TFE3-201ENST00000315869 hCG_38984A0A1B0GV85 526 aa12.79□□□□□ -0.36
TFE3-201ENST00000315869 NTN3O00634 580 aaPredicted RBP12.79□□□□□ -0.36
TFE3-201ENST00000315869 COX6A1P12074 109 aa12.79□□□□□ -0.36
TFE3-201ENST00000315869 TLE4Q04727 773 aa12.79□□□□□ -0.36
TFE3-201ENST00000315869 SELENOHQ8IZQ5 122 aaKnown RBP12.79□□□□□ -0.36
TFE3-201ENST00000315869 CPT1CQ8TCG5 803 aa12.79□□□□□ -0.36
TFE3-201ENST00000315869 ARV1Q9H2C2 271 aa12.79□□□□□ -0.36
TFE3-201ENST00000315869 OR51M1Q9H341 326 aa12.79□□□□□ -0.36
TFE3-201ENST00000315869 ZMAT5Q9UDW3 170 aaKnown RBP12.79□□□□□ -0.36
TFE3-201ENST00000315869 PPP1R3CQ9UQK1 317 aa12.79□□□□□ -0.36
TFE3-201ENST00000315869 SPTBN1Q01082 2364 aaKnown RBP12.79□□□□□ -0.36
TFE3-201ENST00000315869 METTL15P1P0C7V9 234 aa12.79□□□□□ -0.36
TFE3-201ENST00000315869 FGF5P12034 268 aa12.79□□□□□ -0.36
TFE3-201ENST00000315869 ARF1P84077 181 aaKnown RBP12.79□□□□□ -0.36
TFE3-201ENST00000315869 CCDC54Q8NEL0 328 aa12.79□□□□□ -0.36
TFE3-201ENST00000315869 PROK2Q9HC23 129 aa12.79□□□□□ -0.36
TFE3-201ENST00000315869 GPR35Q9HC97 309 aa12.79□□□□□ -0.36
TFE3-201ENST00000315869 ERRFI1Q9UJM3 462 aaPredicted RBP12.79□□□□□ -0.36
TFE3-201ENST00000315869 ATMQ13315 3056 aa12.79□□□□□ -0.36
TFE3-201ENST00000315869 A0A1W2PR80 420 aa12.78□□□□□ -0.36
TFE3-201ENST00000315869 HIST1H3AP68431 136 aa12.78□□□□□ -0.36
TFE3-201ENST00000315869 ZFP36L1Q07352 338 aaKnown RBP12.78□□□□□ -0.36
TFE3-201ENST00000315869 HIST2H3PS2Q5TEC6 136 aa12.78□□□□□ -0.36
TFE3-201ENST00000315869 ALKBH2Q6NS38 261 aa12.78□□□□□ -0.36
TFE3-201ENST00000315869 LILRB2Q8N423 598 aa12.78□□□□□ -0.36
TFE3-201ENST00000315869 OR5T1Q8NG75 326 aa12.78□□□□□ -0.36
TFE3-201ENST00000315869 OR2V1Q8NHB1 315 aa12.78□□□□□ -0.36
TFE3-201ENST00000315869 HPSE2Q8WWQ2 592 aa12.78□□□□□ -0.36
TFE3-201ENST00000315869 TAAR9Q96RI9 348 aa12.78□□□□□ -0.36
TFE3-201ENST00000315869 DECR2Q9NUI1 292 aa12.78□□□□□ -0.36
TFE3-201ENST00000315869 TMEM50AO95807 157 aa12.78□□□□□ -0.36
TFE3-201ENST00000315869 TRGC2P03986 189 aa12.78□□□□□ -0.36
TFE3-201ENST00000315869 EDN3P14138 238 aa12.78□□□□□ -0.36
TFE3-201ENST00000315869 RPS16P62249 146 aaKnown RBP12.78□□□□□ -0.36
TFE3-201ENST00000315869 ZNF610Q8N9Z0 462 aa12.78□□□□□ -0.36
TFE3-201ENST00000315869 CPEB3Q8NE35 698 aaKnown RBP12.78□□□□□ -0.36
TFE3-201ENST00000315869 GNPNAT1Q96EK6 184 aaPredicted RBP12.78□□□□□ -0.36
TFE3-201ENST00000315869 TVP23CQ96ET8 276 aa12.78□□□□□ -0.36
TFE3-201ENST00000315869 GGACTQ9BVM4 153 aa12.78□□□□□ -0.36
TFE3-201ENST00000315869 SCRT1Q9BWW7 348 aa12.78□□□□□ -0.36
TFE3-201ENST00000315869 GAR1Q9NY12 217 aaKnown RBP12.78□□□□□ -0.36
TFE3-201ENST00000315869 SCAF4O95104 1147 aaKnown RBP12.78□□□□□ -0.36
TFE3-201ENST00000315869 VDAC1P21796 283 aa12.78□□□□□ -0.36
TFE3-201ENST00000315869 SPATA46Q5T0L3 261 aa12.78□□□□□ -0.36
TFE3-201ENST00000315869 Q6ZPA2 131 aa12.78□□□□□ -0.36
TFE3-201ENST00000315869 LRTM2Q8N967 370 aa12.78□□□□□ -0.36
TFE3-201ENST00000315869 Q8WTZ3 238 aa12.78□□□□□ -0.36
TFE3-201ENST00000315869 PLK3Q9H4B4 646 aa12.78□□□□□ -0.36
TFE3-201ENST00000315869 TUBA4BQ9H853 241 aa12.78□□□□□ -0.36
TFE3-201ENST00000315869 FOXJ2Q9P0K8 574 aa12.78□□□□□ -0.36
TFE3-201ENST00000315869 PRR14LQ5THK1 2151 aa12.77□□□□□ -0.36
TFE3-201ENST00000315869 SLC22A20A6NK97 555 aa12.77□□□□□ -0.36
TFE3-201ENST00000315869 CEBPZOSA8MTT3 80 aa12.77□□□□□ -0.36
TFE3-201ENST00000315869 RPL36A-HNRNPH2H7BZ11 118 aa12.77□□□□□ -0.36
TFE3-201ENST00000315869 SYNGR1O43759 233 aa12.77□□□□□ -0.36
TFE3-201ENST00000315869 PITX3O75364 302 aa12.77□□□□□ -0.36
TFE3-201ENST00000315869 CXCL1P09341 107 aa12.77□□□□□ -0.36
TFE3-201ENST00000315869 IL11RAQ14626 422 aa12.77□□□□□ -0.36
TFE3-201ENST00000315869 OR1K1Q8NGR3 316 aa12.77□□□□□ -0.36
TFE3-201ENST00000315869 IMMP1LQ96LU5 166 aa12.77□□□□□ -0.36
TFE3-201ENST00000315869 ZNF665Q9H7R5 613 aa12.77□□□□□ -0.36
TFE3-201ENST00000315869 LYRM2Q9NU23 88 aaPredicted RBP12.77□□□□□ -0.36
TFE3-201ENST00000315869 KIAA1456Q9P272 454 aa12.77□□□□□ -0.36
TFE3-201ENST00000315869 CD300LBA8K4G0 201 aa12.77□□□□□ -0.37
TFE3-201ENST00000315869 PPP1R2P9O14990 202 aa12.77□□□□□ -0.37
TFE3-201ENST00000315869 WDR1O75083 606 aa12.77□□□□□ -0.37
TFE3-201ENST00000315869 RBMXL2O75526 392 aaKnown RBP12.77□□□□□ -0.37
TFE3-201ENST00000315869 SRP19P09132 144 aaKnown RBP12.77□□□□□ -0.37
TFE3-201ENST00000315869 EIF3IQ13347 325 aaKnown RBP12.77□□□□□ -0.37
TFE3-201ENST00000315869 OR2T2Q6IF00 324 aa12.77□□□□□ -0.37
TFE3-201ENST00000315869 NECAP1Q8NC96 275 aa12.77□□□□□ -0.37
TFE3-201ENST00000315869 GPR61Q9BZJ8 451 aa12.77□□□□□ -0.37
TFE3-201ENST00000315869 A0A1W2PNU3 283 aaPredicted RBP12.76□□□□□ -0.37
TFE3-201ENST00000315869 OR2B11Q5JQS5 317 aa12.76□□□□□ -0.37
TFE3-201ENST00000315869 GFI1BQ5VTD9 330 aa12.76□□□□□ -0.37
TFE3-201ENST00000315869 OR8G2PQ6IF36 304 aa12.76□□□□□ -0.37
TFE3-201ENST00000315869 SNIP1Q8TAD8 396 aaKnown RBP12.76□□□□□ -0.37
TFE3-201ENST00000315869 FAM166BA8MTA8 275 aa12.76□□□□□ -0.37
TFE3-201ENST00000315869 NGFP01138 241 aa12.76□□□□□ -0.37
TFE3-201ENST00000315869 HOXB1P14653 301 aaPredicted RBP12.76□□□□□ -0.37
TFE3-201ENST00000315869 FOXG1P55316 489 aaPredicted RBP12.76□□□□□ -0.37
TFE3-201ENST00000315869 SPANXN5Q5MJ07 72 aa12.76□□□□□ -0.37
TFE3-201ENST00000315869 DCAF12Q5T6F0 453 aa12.76□□□□□ -0.37
TFE3-201ENST00000315869 SPINK14Q6IE38 97 aa12.76□□□□□ -0.37
TFE3-201ENST00000315869 SPSB3Q6PJ21 355 aa12.76□□□□□ -0.37
TFE3-201ENST00000315869 HEPN1Q6WQI6 88 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms