RNA–Protein interactions for RNA: ENST00000314289.12

RNF4-201, Transcript of ring finger protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF4, Length 3,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-201ENST00000314289 SUMF2Q8NBJ7 301 aa10.57□□□□□ -0.72
RNF4-201ENST00000314289 SECTM1Q8WVN6 248 aa10.57□□□□□ -0.72
RNF4-201ENST00000314289 SLC2A9Q9NRM0 540 aa10.57□□□□□ -0.72
RNF4-201ENST00000314289 TRBV6-7A0A0A0MS04 114 aa10.57□□□□□ -0.72
RNF4-201ENST00000314289 SIRPB1O00241 398 aa10.57□□□□□ -0.72
RNF4-201ENST00000314289 RRP8O43159 456 aaKnown RBP10.57□□□□□ -0.72
RNF4-201ENST00000314289 WDR1O75083 606 aa10.57□□□□□ -0.72
RNF4-201ENST00000314289 FABP9Q0Z7S8 132 aa10.57□□□□□ -0.72
RNF4-201ENST00000314289 SPIN3Q5JUX0 258 aa10.57□□□□□ -0.72
RNF4-201ENST00000314289 MEX3BQ6ZN04 569 aaKnown RBP10.57□□□□□ -0.72
RNF4-201ENST00000314289 RSRP1Q9BUV0 290 aa10.57□□□□□ -0.72
RNF4-201ENST00000314289 RAB18Q9NP72 206 aa10.57□□□□□ -0.72
RNF4-201ENST00000314289 PTPRQQ9UMZ3 2332 aa10.57□□□□□ -0.72
RNF4-201ENST00000314289 TNFSF12O43508 249 aa10.56□□□□□ -0.72
RNF4-201ENST00000314289 CTSDP07339 412 aaPredicted RBP10.56□□□□□ -0.72
RNF4-201ENST00000314289 OR8U9P0C7N5 309 aa10.56□□□□□ -0.72
RNF4-201ENST00000314289 RD3LP0DJH9 198 aa10.56□□□□□ -0.72
RNF4-201ENST00000314289 HERPUD1Q15011 391 aa10.56□□□□□ -0.72
RNF4-201ENST00000314289 Q6ZRG5 221 aa10.56□□□□□ -0.72
RNF4-201ENST00000314289 LYZL2Q7Z4W2 148 aa10.56□□□□□ -0.72
RNF4-201ENST00000314289 FAM58AQ8N1B3 248 aa10.56□□□□□ -0.72
RNF4-201ENST00000314289 OR8U1Q8NH10 309 aa10.56□□□□□ -0.72
RNF4-201ENST00000314289 IL1F10Q8WWZ1 152 aa10.56□□□□□ -0.72
RNF4-201ENST00000314289 HIST1H2BAQ96A08 127 aa10.56□□□□□ -0.72
RNF4-201ENST00000314289 MSL2Q9HCI7 577 aa10.56□□□□□ -0.72
RNF4-201ENST00000314289 ATRXP46100 2492 aa10.56□□□□□ -0.72
RNF4-201ENST00000314289 CRYM-AS1A6NIL9 109 aa10.56□□□□□ -0.72
RNF4-201ENST00000314289 A6NLC8 198 aa10.56□□□□□ -0.72
RNF4-201ENST00000314289 M0R036 132 aa10.56□□□□□ -0.72
RNF4-201ENST00000314289 TNFSF13O75888 250 aa10.56□□□□□ -0.72
RNF4-201ENST00000314289 SMIM6P0DI80 62 aa10.56□□□□□ -0.72
RNF4-201ENST00000314289 ZNF573Q86YE8 665 aa10.56□□□□□ -0.72
RNF4-201ENST00000314289 WDR31Q8NA23 367 aa10.56□□□□□ -0.72
RNF4-201ENST00000314289 SCCPDHQ8NBX0 429 aa10.56□□□□□ -0.72
RNF4-201ENST00000314289 KLF14Q8TD94 323 aaPredicted RBP10.56□□□□□ -0.72
RNF4-201ENST00000314289 KIRREL1Q96J84 757 aa10.56□□□□□ -0.72
RNF4-201ENST00000314289 ZNF251Q9BRH9 671 aa10.56□□□□□ -0.72
RNF4-201ENST00000314289 SLC5A7Q9GZV3 580 aa10.56□□□□□ -0.72
RNF4-201ENST00000314289 OR51I2Q9H344 312 aa10.56□□□□□ -0.72
RNF4-201ENST00000314289 OBP2BQ9NPH6 170 aa10.56□□□□□ -0.72
RNF4-201ENST00000314289 UFSP2Q9NUQ7 469 aa10.56□□□□□ -0.72
RNF4-201ENST00000314289 OR14J1Q9UGF5 321 aa10.56□□□□□ -0.72
RNF4-201ENST00000314289 MPC1Q9Y5U8 109 aa10.56□□□□□ -0.72
RNF4-201ENST00000314289 TRAV24A0A0B4J272 114 aa10.56□□□□□ -0.72
RNF4-201ENST00000314289 DIRAS3O95661 229 aa10.56□□□□□ -0.72
RNF4-201ENST00000314289 PPYP01298 95 aa10.56□□□□□ -0.72
RNF4-201ENST00000314289 NBL1P41271 181 aa10.56□□□□□ -0.72
RNF4-201ENST00000314289 GLP1RP43220 463 aa10.56□□□□□ -0.72
RNF4-201ENST00000314289 HERV-K104P61576 105 aa10.56□□□□□ -0.72
RNF4-201ENST00000314289 ZNF154Q13106 437 aa10.56□□□□□ -0.72
RNF4-201ENST00000314289 MRPL49Q13405 166 aaKnown RBP10.56□□□□□ -0.72
RNF4-201ENST00000314289 GUSBP1Q15486 140 aa10.56□□□□□ -0.72
RNF4-201ENST00000314289 TMEM211Q6ICI0 200 aa10.56□□□□□ -0.72
RNF4-201ENST00000314289 OR2A2Q6IF42 318 aa10.56□□□□□ -0.72
RNF4-201ENST00000314289 SMIM8Q96KF7 97 aa10.56□□□□□ -0.72
RNF4-201ENST00000314289 LSM5Q9Y4Y9 91 aaKnown RBP10.56□□□□□ -0.72
RNF4-201ENST00000314289 IGKV1D-13A0A0B4J2D9 117 aa10.55□□□□□ -0.72
RNF4-201ENST00000314289 hCG_1809904A0A1W2PP81 198 aa10.55□□□□□ -0.72
RNF4-201ENST00000314289 A0A1W2PR64 198 aa10.55□□□□□ -0.72
RNF4-201ENST00000314289 A0A1W2PRV1 198 aa10.55□□□□□ -0.72
RNF4-201ENST00000314289 SLC33A1O00400 549 aaPredicted RBP10.55□□□□□ -0.72
RNF4-201ENST00000314289 PHF1O43189 567 aaPredicted RBP10.55□□□□□ -0.72
RNF4-201ENST00000314289 IGKV1-13P0DP09 117 aa10.55□□□□□ -0.72
RNF4-201ENST00000314289 FOXC1Q12948 553 aa10.55□□□□□ -0.72
RNF4-201ENST00000314289 SURF2Q15527 256 aaPredicted RBP10.55□□□□□ -0.72
RNF4-201ENST00000314289 GGNBP1Q5YKI7 109 aa10.55□□□□□ -0.72
RNF4-201ENST00000314289 STARD4Q96DR4 205 aa10.55□□□□□ -0.72
RNF4-201ENST00000314289 MIOXQ9UGB7 285 aa10.55□□□□□ -0.72
RNF4-201ENST00000314289 SH3BGRL2Q9UJC5 107 aa10.55□□□□□ -0.72
RNF4-201ENST00000314289 PKDREJQ9NTG1 2253 aa10.55□□□□□ -0.72
RNF4-201ENST00000314289 CHD8Q9HCK8 2581 aa10.55□□□□□ -0.72
RNF4-201ENST00000314289 POLEQ07864 2286 aa10.55□□□□□ -0.72
RNF4-201ENST00000314289 IGKV1-6A0A0C4DH72 117 aa10.55□□□□□ -0.72
RNF4-201ENST00000314289 A0A1W2PPH5 198 aa10.55□□□□□ -0.72
RNF4-201ENST00000314289 C5orf52A6NGY3 159 aa10.55□□□□□ -0.72
RNF4-201ENST00000314289 HSD17B6O14756 317 aa10.55□□□□□ -0.72
RNF4-201ENST00000314289 WNT9BO14905 357 aa10.55□□□□□ -0.72
RNF4-201ENST00000314289 CEACAM4O75871 244 aa10.55□□□□□ -0.72
RNF4-201ENST00000314289 CECR9P0C854 216 aa10.55□□□□□ -0.72
RNF4-201ENST00000314289 SNIP1Q8TAD8 396 aaKnown RBP10.55□□□□□ -0.72
RNF4-201ENST00000314289 SAT2Q96F10 170 aaPredicted RBP10.55□□□□□ -0.72
RNF4-201ENST00000314289 C2orf50Q96LR7 162 aa10.55□□□□□ -0.72
RNF4-201ENST00000314289 AQP10Q96PS8 301 aa10.55□□□□□ -0.72
RNF4-201ENST00000314289 TP53RKQ96S44 253 aa10.55□□□□□ -0.72
RNF4-201ENST00000314289 Q9N2K0 584 aa10.55□□□□□ -0.72
RNF4-201ENST00000314289 GLRX2Q9NS18 164 aa10.55□□□□□ -0.72
RNF4-201ENST00000314289 C1orf123Q9NWV4 160 aa10.55□□□□□ -0.72
RNF4-201ENST00000314289 A0A1B0GV50 99 aa10.54□□□□□ -0.72
RNF4-201ENST00000314289 S100A8P05109 93 aa10.54□□□□□ -0.72
RNF4-201ENST00000314289 NQO2P16083 231 aa10.54□□□□□ -0.72
RNF4-201ENST00000314289 OR2B8PP59922 312 aa10.54□□□□□ -0.72
RNF4-201ENST00000314289 RTP5Q14D33 572 aa10.54□□□□□ -0.72
RNF4-201ENST00000314289 AWAT1Q58HT5 328 aa10.54□□□□□ -0.72
RNF4-201ENST00000314289 C15orf54Q8N8G6 183 aa10.54□□□□□ -0.72
RNF4-201ENST00000314289 POC1AQ8NBT0 407 aa10.54□□□□□ -0.72
RNF4-201ENST00000314289 OR5B21A6NL26 309 aa10.54□□□□□ -0.72
RNF4-201ENST00000314289 DEGS1O15121 323 aa10.54□□□□□ -0.72
RNF4-201ENST00000314289 NAPSAO96009 420 aa10.54□□□□□ -0.72
RNF4-201ENST00000314289 PRAMEF6Q5VXH4 476 aa10.54□□□□□ -0.72
RNF4-201ENST00000314289 EIF5AL1Q6IS14 154 aaKnown RBP10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms