RNA–Protein interactions for RNA: ENST00000311943.11

SCFD1-201, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 2,016 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-201ENST00000311943 SLITRK2Q9H156 845 aa9.72□□□□□ -0.85
SCFD1-201ENST00000311943 IFT22Q9H7X7 185 aa9.72□□□□□ -0.85
SCFD1-201ENST00000311943 C1RLQ9NZP8 487 aa9.72□□□□□ -0.85
SCFD1-201ENST00000311943 STUB1Q9UNE7 303 aa9.72□□□□□ -0.85
SCFD1-201ENST00000311943 PSG11Q9UQ72 335 aa9.72□□□□□ -0.85
SCFD1-201ENST00000311943 KCNK7Q9Y2U2 307 aa9.72□□□□□ -0.85
SCFD1-201ENST00000311943 TRRAPQ9Y4A5 3859 aa9.72□□□□□ -0.85
SCFD1-201ENST00000311943 A0A1W2PPH5 198 aa9.72□□□□□ -0.85
SCFD1-201ENST00000311943 SH2D7A6NKC9 451 aaPredicted RBP9.72□□□□□ -0.85
SCFD1-201ENST00000311943 IFITM5A6NNB3 132 aa9.72□□□□□ -0.85
SCFD1-201ENST00000311943 FOXI3A8MTJ6 420 aaPredicted RBP9.72□□□□□ -0.85
SCFD1-201ENST00000311943 MCRIP1C9JLW8 97 aa9.72□□□□□ -0.85
SCFD1-201ENST00000311943 NPIPB11E5RHQ5 1161 aa9.72□□□□□ -0.85
SCFD1-201ENST00000311943 MRPS14O60783 128 aaKnown RBP9.72□□□□□ -0.85
SCFD1-201ENST00000311943 IGLV1-47P01700 117 aa9.72□□□□□ -0.85
SCFD1-201ENST00000311943 SNRPBP14678 240 aaKnown RBP9.72□□□□□ -0.85
SCFD1-201ENST00000311943 RAB3BP20337 219 aa9.72□□□□□ -0.85
SCFD1-201ENST00000311943 PSMA1P25786 263 aaKnown RBP9.72□□□□□ -0.85
SCFD1-201ENST00000311943 ZNF134P52741 427 aa9.72□□□□□ -0.85
SCFD1-201ENST00000311943 KRTAP10-3P60369 221 aa9.72□□□□□ -0.85
SCFD1-201ENST00000311943 HABP2Q14520 560 aaPredicted RBP9.72□□□□□ -0.85
SCFD1-201ENST00000311943 TRAM1Q15629 374 aa9.72□□□□□ -0.85
SCFD1-201ENST00000311943 AWAT1Q58HT5 328 aa9.72□□□□□ -0.85
SCFD1-201ENST00000311943 SLC35E4Q6ICL7 350 aa9.72□□□□□ -0.85
SCFD1-201ENST00000311943 LDLRAD3Q86YD5 345 aa9.72□□□□□ -0.85
SCFD1-201ENST00000311943 DTX3Q8N9I9 347 aa9.72□□□□□ -0.85
SCFD1-201ENST00000311943 BEND2Q8NDZ0 799 aa9.72□□□□□ -0.85
SCFD1-201ENST00000311943 MRPL30Q8TCC3 161 aaKnown RBP9.72□□□□□ -0.85
SCFD1-201ENST00000311943 ARL11Q969Q4 196 aa9.72□□□□□ -0.85
SCFD1-201ENST00000311943 PARP12Q9H0J9 701 aaKnown RBP9.72□□□□□ -0.85
SCFD1-201ENST00000311943 LIN7BQ9HAP6 207 aa9.72□□□□□ -0.85
SCFD1-201ENST00000311943 ANK2Q01484 3957 aa9.71□□□□□ -0.85
SCFD1-201ENST00000311943 PDCD6O75340 191 aa9.71□□□□□ -0.86
SCFD1-201ENST00000311943 IL1AP01583 271 aa9.71□□□□□ -0.86
SCFD1-201ENST00000311943 FUT3P21217 361 aa9.71□□□□□ -0.86
SCFD1-201ENST00000311943 REG1BP48304 166 aa9.71□□□□□ -0.86
SCFD1-201ENST00000311943 LGALS4P56470 323 aa9.71□□□□□ -0.86
SCFD1-201ENST00000311943 LOXL3P58215 753 aa9.71□□□□□ -0.86
SCFD1-201ENST00000311943 SCGB2A2Q13296 93 aa9.71□□□□□ -0.86
SCFD1-201ENST00000311943 GPR176Q14439 515 aa9.71□□□□□ -0.86
SCFD1-201ENST00000311943 MIDNQ504T8 468 aa9.71□□□□□ -0.86
SCFD1-201ENST00000311943 ZNF565Q8N9K5 539 aa9.71□□□□□ -0.86
SCFD1-201ENST00000311943 OR52L2PQ8NGH6 319 aa9.71□□□□□ -0.86
SCFD1-201ENST00000311943 OR13D1Q8NGV5 346 aa9.71□□□□□ -0.86
SCFD1-201ENST00000311943 NDNFQ8TB73 568 aa9.71□□□□□ -0.86
SCFD1-201ENST00000311943 SSMEM1Q8WWF3 244 aa9.71□□□□□ -0.86
SCFD1-201ENST00000311943 ARHGAP5-AS1Q96IT6 56 aa9.71□□□□□ -0.86
SCFD1-201ENST00000311943 CLEC7AQ9BXN2 247 aa9.71□□□□□ -0.86
SCFD1-201ENST00000311943 TAS2R3Q9NYW6 316 aa9.71□□□□□ -0.86
SCFD1-201ENST00000311943 IDI2-AS1Q9NZ38 188 aa9.71□□□□□ -0.86
SCFD1-201ENST00000311943 DAPK2Q9UIK4 370 aa9.71□□□□□ -0.86
SCFD1-201ENST00000311943 TRAPPC2LQ9UL33 140 aa9.71□□□□□ -0.86
SCFD1-201ENST00000311943 A0A075B6Q4 140 aa9.7□□□□□ -0.86
SCFD1-201ENST00000311943 TMEM30CPA0ZSE6 113 aa9.7□□□□□ -0.86
SCFD1-201ENST00000311943 TMEM89A2RUT3 159 aa9.7□□□□□ -0.86
SCFD1-201ENST00000311943 ZNF729A6NN14 1252 aaPredicted RBP9.7□□□□□ -0.86
SCFD1-201ENST00000311943 BPIFB3P59826 476 aa9.7□□□□□ -0.86
SCFD1-201ENST00000311943 OR5H6Q8NGV6 325 aa9.7□□□□□ -0.86
SCFD1-201ENST00000311943 MAFIPQ8WZ33 124 aa9.7□□□□□ -0.86
SCFD1-201ENST00000311943 FCGR1BQ92637 280 aa9.7□□□□□ -0.86
SCFD1-201ENST00000311943 THRSPQ92748 146 aa9.7□□□□□ -0.86
SCFD1-201ENST00000311943 YIPF6Q96EC8 236 aa9.7□□□□□ -0.86
SCFD1-201ENST00000311943 JMJD8Q96S16 334 aa9.7□□□□□ -0.86
SCFD1-201ENST00000311943 TM2D1Q9BX74 207 aa9.7□□□□□ -0.86
SCFD1-201ENST00000311943 CST11Q9H112 138 aa9.7□□□□□ -0.86
SCFD1-201ENST00000311943 GAL3ST2Q9H3Q3 398 aa9.7□□□□□ -0.86
SCFD1-201ENST00000311943 OR6C3Q9NZP0 311 aa9.7□□□□□ -0.86
SCFD1-201ENST00000311943 STEAP1Q9UHE8 339 aa9.7□□□□□ -0.86
SCFD1-201ENST00000311943 AK3Q9UIJ7 227 aa9.7□□□□□ -0.86
SCFD1-201ENST00000311943 TRAV1-2A0A0B4J238 106 aa9.7□□□□□ -0.86
SCFD1-201ENST00000311943 hCG_1809904A0A1W2PP81 198 aa9.7□□□□□ -0.86
SCFD1-201ENST00000311943 A0A1W2PPE2 198 aa9.7□□□□□ -0.86
SCFD1-201ENST00000311943 A0A1W2PR64 198 aa9.7□□□□□ -0.86
SCFD1-201ENST00000311943 A0A1W2PRV1 198 aa9.7□□□□□ -0.86
SCFD1-201ENST00000311943 CLDN34H7C241 214 aa9.7□□□□□ -0.86
SCFD1-201ENST00000311943 TNFAIP8O95379 198 aa9.7□□□□□ -0.86
SCFD1-201ENST00000311943 BPNT1O95861 308 aa9.7□□□□□ -0.86
SCFD1-201ENST00000311943 CD3GP09693 182 aa9.7□□□□□ -0.86
SCFD1-201ENST00000311943 HKR1P10072 659 aa9.7□□□□□ -0.86
SCFD1-201ENST00000311943 FGF9P31371 208 aaPredicted RBP9.7□□□□□ -0.86
SCFD1-201ENST00000311943 Q6ZSV7 163 aa9.7□□□□□ -0.86
SCFD1-201ENST00000311943 KCNG3Q8TAE7 436 aa9.7□□□□□ -0.86
SCFD1-201ENST00000311943 MRPS24Q96EL2 167 aaKnown RBP9.7□□□□□ -0.86
SCFD1-201ENST00000311943 MEGF9Q9H1U4 602 aa9.7□□□□□ -0.86
SCFD1-201ENST00000311943 ZNF696Q9H7X3 374 aa9.7□□□□□ -0.86
SCFD1-201ENST00000311943 TAF9BQ9HBM6 251 aa9.7□□□□□ -0.86
SCFD1-201ENST00000311943 IGHV3-72A0A0B4J1Y9 119 aa9.69□□□□□ -0.86
SCFD1-201ENST00000311943 BUB1B-PAK6H3BSN5 160 aa9.69□□□□□ -0.86
SCFD1-201ENST00000311943 HBZP02008 142 aa9.69□□□□□ -0.86
SCFD1-201ENST00000311943 GNB3P16520 340 aa9.69□□□□□ -0.86
SCFD1-201ENST00000311943 MYL9P24844 172 aa9.69□□□□□ -0.86
SCFD1-201ENST00000311943 NCS1P62166 190 aa9.69□□□□□ -0.86
SCFD1-201ENST00000311943 HLA-DRB5Q30154 266 aa9.69□□□□□ -0.86
SCFD1-201ENST00000311943 IZUMO1Q8IYV9 350 aa9.69□□□□□ -0.86
SCFD1-201ENST00000311943 SPATA3Q8NHX4 192 aa9.69□□□□□ -0.86
SCFD1-201ENST00000311943 SETD6Q8TBK2 473 aa9.69□□□□□ -0.86
SCFD1-201ENST00000311943 SSR3Q9UNL2 185 aa9.69□□□□□ -0.86
SCFD1-201ENST00000311943 ZNF736B4DX44 427 aaPredicted RBP9.68□□□□□ -0.86
SCFD1-201ENST00000311943 LY6LH3BQJ8 138 aa9.68□□□□□ -0.86
SCFD1-201ENST00000311943 J3QR06 171 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 97.7 ms