RNA–Protein interactions for RNA: ENST00000310301.8

VPS41-202, Transcript of VPS41, HOPS complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS41, Length 5,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-202ENST00000310301 NMUP48645 174 aa7.2□□□□□ -1.26
VPS41-202ENST00000310301 AESQ08117 197 aa7.2□□□□□ -1.26
VPS41-202ENST00000310301 RNPS1Q15287 305 aaKnown RBP7.2□□□□□ -1.26
VPS41-202ENST00000310301 SMIM21Q3B7S5 101 aa7.2□□□□□ -1.26
VPS41-202ENST00000310301 KHDC1LQ5JSQ8 128 aa7.2□□□□□ -1.26
VPS41-202ENST00000310301 SPATA46Q5T0L3 261 aa7.2□□□□□ -1.26
VPS41-202ENST00000310301 TBC1D26Q86UD7 250 aa7.2□□□□□ -1.26
VPS41-202ENST00000310301 FAM219AQ8IW50 185 aa7.2□□□□□ -1.26
VPS41-202ENST00000310301 PUSL1Q8N0Z8 303 aaKnown RBP7.2□□□□□ -1.26
VPS41-202ENST00000310301 ADAD2Q8NCV1 583 aaKnown RBP7.2□□□□□ -1.26
VPS41-202ENST00000310301 NRIP2Q9BQI9 281 aa7.2□□□□□ -1.26
VPS41-202ENST00000310301 AURKAIP1Q9NWT8 199 aaPredicted RBP7.2□□□□□ -1.26
VPS41-202ENST00000310301 A0A0B4J2E0 115 aa7.2□□□□□ -1.26
VPS41-202ENST00000310301 A0A1B0GX12 115 aa7.2□□□□□ -1.26
VPS41-202ENST00000310301 KCNAB3O43448 404 aa7.2□□□□□ -1.26
VPS41-202ENST00000310301 SRSF10O75494 262 aaKnown RBP7.2□□□□□ -1.26
VPS41-202ENST00000310301 FABP2P12104 132 aa7.2□□□□□ -1.26
VPS41-202ENST00000310301 WNT3P56703 355 aa7.2□□□□□ -1.26
VPS41-202ENST00000310301 FOXF1Q12946 379 aa7.2□□□□□ -1.26
VPS41-202ENST00000310301 IGFBP7Q16270 282 aa7.2□□□□□ -1.26
VPS41-202ENST00000310301 ALKBH6Q3KRA9 238 aa7.2□□□□□ -1.26
VPS41-202ENST00000310301 PECRQ9BY49 303 aa7.2□□□□□ -1.26
VPS41-202ENST00000310301 TMEM167BQ9NRX6 74 aa7.2□□□□□ -1.26
VPS41-202ENST00000310301 UFC1Q9Y3C8 167 aa7.2□□□□□ -1.26
VPS41-202ENST00000310301 DMRT1Q9Y5R6 373 aa7.2□□□□□ -1.26
VPS41-202ENST00000310301 MFSD2BA6NFX1 497 aa7.2□□□□□ -1.26
VPS41-202ENST00000310301 PDE6DO43924 150 aa7.2□□□□□ -1.26
VPS41-202ENST00000310301 CXCL13O43927 109 aa7.2□□□□□ -1.26
VPS41-202ENST00000310301 PGA4P0DJD7 388 aa7.2□□□□□ -1.26
VPS41-202ENST00000310301 PGA5P0DJD9 388 aa7.2□□□□□ -1.26
VPS41-202ENST00000310301 RCC1P18754 421 aaPredicted RBP7.2□□□□□ -1.26
VPS41-202ENST00000310301 FAM3BP58499 235 aaPredicted RBP7.2□□□□□ -1.26
VPS41-202ENST00000310301 UBE2L3P68036 154 aaKnown RBP7.2□□□□□ -1.26
VPS41-202ENST00000310301 EWSR1Q01844 656 aaKnown RBP eCLIP7.2□□□□□ -1.26
VPS41-202ENST00000310301 MRGPRGQ86SM5 289 aa7.2□□□□□ -1.26
VPS41-202ENST00000310301 ZNF501Q96CX3 271 aaPredicted RBP7.2□□□□□ -1.26
VPS41-202ENST00000310301 MMP25Q9NPA2 562 aa7.2□□□□□ -1.26
VPS41-202ENST00000310301 RCC2Q9P258 522 aaKnown RBP7.2□□□□□ -1.26
VPS41-202ENST00000310301 ST8SIA5O15466 376 aa7.2□□□□□ -1.26
VPS41-202ENST00000310301 ZNF345Q14585 488 aa7.2□□□□□ -1.26
VPS41-202ENST00000310301 OR1F12Q8NHA8 337 aa7.2□□□□□ -1.26
VPS41-202ENST00000310301 OR2V1Q8NHB1 315 aa7.2□□□□□ -1.26
VPS41-202ENST00000310301 RPS4Y2Q8TD47 263 aa7.2□□□□□ -1.26
VPS41-202ENST00000310301 TECRQ9NZ01 308 aaKnown RBP7.2□□□□□ -1.26
VPS41-202ENST00000310301 TNFSF18Q9UNG2 199 aa7.2□□□□□ -1.26
VPS41-202ENST00000310301 ZNF256Q9Y2P7 627 aaPredicted RBP7.2□□□□□ -1.26
VPS41-202ENST00000310301 TRGV10A0A0A0MS01 117 aa7.19□□□□□ -1.26
VPS41-202ENST00000310301 M0R1B8 84 aa7.19□□□□□ -1.26
VPS41-202ENST00000310301 P01737 135 aa7.19□□□□□ -1.26
VPS41-202ENST00000310301 MMP9P14780 707 aa7.19□□□□□ -1.26
VPS41-202ENST00000310301 BRS3P32247 399 aa7.19□□□□□ -1.26
VPS41-202ENST00000310301 GNG10P50151 68 aa7.19□□□□□ -1.26
VPS41-202ENST00000310301 FMODQ06828 376 aa7.19□□□□□ -1.26
VPS41-202ENST00000310301 VMA21Q3ZAQ7 101 aa7.19□□□□□ -1.26
VPS41-202ENST00000310301 PNPLA5Q7Z6Z6 429 aaPredicted RBP7.19□□□□□ -1.26
VPS41-202ENST00000310301 RSG1Q9BU20 258 aa7.19□□□□□ -1.26
VPS41-202ENST00000310301 PSG11Q9UQ72 335 aa7.19□□□□□ -1.26
VPS41-202ENST00000310301 ZFP30Q9Y2G7 519 aa7.19□□□□□ -1.26
VPS41-202ENST00000310301 SMPD2O60906 423 aa7.19□□□□□ -1.26
VPS41-202ENST00000310301 NGFP01138 241 aa7.19□□□□□ -1.26
VPS41-202ENST00000310301 TMIGD3P0DMS9 266 aaPredicted RBP7.19□□□□□ -1.26
VPS41-202ENST00000310301 CEBPDP49716 269 aaPredicted RBP7.19□□□□□ -1.26
VPS41-202ENST00000310301 PSG5Q15238 335 aa7.19□□□□□ -1.26
VPS41-202ENST00000310301 DMKNQ6E0U4 476 aaPredicted RBP7.19□□□□□ -1.26
VPS41-202ENST00000310301 CD300LDQ6UXZ3 194 aa7.19□□□□□ -1.26
VPS41-202ENST00000310301 SLC35E3Q7Z769 313 aa7.19□□□□□ -1.26
VPS41-202ENST00000310301 PDPNQ86YL7 162 aa7.19□□□□□ -1.26
VPS41-202ENST00000310301 TGIF2LYQ8IUE0 185 aa7.19□□□□□ -1.26
VPS41-202ENST00000310301 OR1P1Q8NH06 330 aa7.19□□□□□ -1.26
VPS41-202ENST00000310301 MRPL24Q96A35 216 aaKnown RBP7.19□□□□□ -1.26
VPS41-202ENST00000310301 MRPL37Q9BZE1 423 aaKnown RBP7.19□□□□□ -1.26
VPS41-202ENST00000310301 ZNF275Q9NSD4 429 aaPredicted RBP7.19□□□□□ -1.26
VPS41-202ENST00000310301 TAAR3PQ9P1P4 343 aa7.19□□□□□ -1.26
VPS41-202ENST00000310301 KLK13Q9UKR3 277 aa7.19□□□□□ -1.26
VPS41-202ENST00000310301 CABIN1Q9Y6J0 2220 aa7.19□□□□□ -1.26
VPS41-202ENST00000310301 AREGP15514 252 aa7.19□□□□□ -1.26
VPS41-202ENST00000310301 ORM2P19652 201 aa7.19□□□□□ -1.26
VPS41-202ENST00000310301 HMGA2P52926 109 aa7.19□□□□□ -1.26
VPS41-202ENST00000310301 RIGQ13278 110 aa7.19□□□□□ -1.26
VPS41-202ENST00000310301 MOB3BQ86TA1 216 aa7.19□□□□□ -1.26
VPS41-202ENST00000310301 WDFY1Q8IWB7 410 aa7.19□□□□□ -1.26
VPS41-202ENST00000310301 OR4P4Q8NGL7 312 aa7.19□□□□□ -1.26
VPS41-202ENST00000310301 SYNGR2O43760 224 aa7.19□□□□□ -1.26
VPS41-202ENST00000310301 DHRS3O75911 302 aa7.19□□□□□ -1.26
VPS41-202ENST00000310301 NMBP08949 121 aa7.19□□□□□ -1.26
VPS41-202ENST00000310301 IFITM2Q01629 132 aa7.19□□□□□ -1.26
VPS41-202ENST00000310301 ANKRD55Q3KP44 614 aa7.19□□□□□ -1.26
VPS41-202ENST00000310301 TTC32Q5I0X7 151 aa7.19□□□□□ -1.26
VPS41-202ENST00000310301 LRRC75AQ8NAA5 344 aa7.19□□□□□ -1.26
VPS41-202ENST00000310301 ADAMTS17Q8TE56 1095 aa7.19□□□□□ -1.26
VPS41-202ENST00000310301 ABHD14AQ9BUJ0 271 aa7.19□□□□□ -1.26
VPS41-202ENST00000310301 CBLN4Q9NTU7 201 aa7.19□□□□□ -1.26
VPS41-202ENST00000310301 FOXD3Q9UJU5 478 aaPredicted RBP7.19□□□□□ -1.26
VPS41-202ENST00000310301 TRIP11Q15643 1979 aa7.19□□□□□ -1.26
VPS41-202ENST00000310301 A0A1W2PQM1 296 aa7.19□□□□□ -1.26
VPS41-202ENST00000310301 SCGB1A1P11684 91 aa7.19□□□□□ -1.26
VPS41-202ENST00000310301 EIF4EBP2Q13542 120 aaPredicted RBP7.19□□□□□ -1.26
VPS41-202ENST00000310301 CXorf67Q86X51 503 aaPredicted RBP7.19□□□□□ -1.26
VPS41-202ENST00000310301 ABHD3Q8WU67 409 aa7.19□□□□□ -1.26
VPS41-202ENST00000310301 WNT2BQ93097 391 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms