RNA–Protein interactions for RNA: ENST00000309934.4

SEC22A-201, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC22A, Length 4,228 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-201ENST00000309934 RPUSD4Q96CM3 377 aaKnown RBP5.21□□□□□ -1.57
SEC22A-201ENST00000309934 KIRREL1Q96J84 757 aa5.21□□□□□ -1.57
SEC22A-201ENST00000309934 AKIRIN1Q9H9L7 192 aaPredicted RBP5.21□□□□□ -1.57
SEC22A-201ENST00000309934 C1orf123Q9NWV4 160 aa5.21□□□□□ -1.57
SEC22A-201ENST00000309934 LAMP3Q9UQV4 416 aa5.21□□□□□ -1.57
SEC22A-201ENST00000309934 CNOT1A5YKK6 2376 aaKnown RBP5.21□□□□□ -1.57
SEC22A-201ENST00000309934 TMEM272A0A1B0GTI8 110 aa5.21□□□□□ -1.58
SEC22A-201ENST00000309934 C5orf52A6NGY3 159 aa5.21□□□□□ -1.58
SEC22A-201ENST00000309934 DEGS1O15121 323 aa5.21□□□□□ -1.58
SEC22A-201ENST00000309934 KCNAB3O43448 404 aa5.21□□□□□ -1.58
SEC22A-201ENST00000309934 OR5G3P0C626 314 aa5.21□□□□□ -1.58
SEC22A-201ENST00000309934 GABRR1P24046 479 aa5.21□□□□□ -1.58
SEC22A-201ENST00000309934 GNRHRP30968 328 aa5.21□□□□□ -1.58
SEC22A-201ENST00000309934 AESQ08117 197 aa5.21□□□□□ -1.58
SEC22A-201ENST00000309934 TMEM177Q53S58 311 aa5.21□□□□□ -1.58
SEC22A-201ENST00000309934 PHYHD1Q5SRE7 291 aa5.21□□□□□ -1.58
SEC22A-201ENST00000309934 SFRP5Q5T4F7 317 aa5.21□□□□□ -1.58
SEC22A-201ENST00000309934 MRGPRGQ86SM5 289 aa5.21□□□□□ -1.58
SEC22A-201ENST00000309934 OR5D13Q8NGL4 314 aa5.21□□□□□ -1.58
SEC22A-201ENST00000309934 MALSU1Q96EH3 234 aa5.21□□□□□ -1.58
SEC22A-201ENST00000309934 C1QTNF5Q9BXJ0 243 aa5.21□□□□□ -1.58
SEC22A-201ENST00000309934 V9GYH0 126 aa5.21□□□□□ -1.58
SEC22A-201ENST00000309934 ANKRD20A5PA0PJZ0 165 aa5.21□□□□□ -1.58
SEC22A-201ENST00000309934 C16orf97H3BN30 126 aa5.21□□□□□ -1.58
SEC22A-201ENST00000309934 SPINT2O43291 252 aa5.21□□□□□ -1.58
SEC22A-201ENST00000309934 APOA2P02652 100 aa5.21□□□□□ -1.58
SEC22A-201ENST00000309934 FGF2P09038 288 aa5.21□□□□□ -1.58
SEC22A-201ENST00000309934 HOXB5P09067 269 aa5.21□□□□□ -1.58
SEC22A-201ENST00000309934 EPHA1P21709 976 aa5.21□□□□□ -1.58
SEC22A-201ENST00000309934 IL3RAP26951 378 aa5.21□□□□□ -1.58
SEC22A-201ENST00000309934 PSG4Q00888 419 aa5.21□□□□□ -1.58
SEC22A-201ENST00000309934 PRDX4Q13162 271 aa5.21□□□□□ -1.58
SEC22A-201ENST00000309934 FHL1Q13642 323 aa5.21□□□□□ -1.58
SEC22A-201ENST00000309934 ENDOGQ14249 297 aaKnown RBP5.21□□□□□ -1.58
SEC22A-201ENST00000309934 HLXQ14774 488 aaPredicted RBP5.21□□□□□ -1.58
SEC22A-201ENST00000309934 OR8G2PQ6IF36 304 aa5.21□□□□□ -1.58
SEC22A-201ENST00000309934 MYPOPQ86VE0 399 aaPredicted RBP5.21□□□□□ -1.58
SEC22A-201ENST00000309934 OR8I2Q8N0Y5 310 aa5.21□□□□□ -1.58
SEC22A-201ENST00000309934 NICN1Q9BSH3 213 aa5.21□□□□□ -1.58
SEC22A-201ENST00000309934 SLC7A10Q9NS82 523 aa5.21□□□□□ -1.58
SEC22A-201ENST00000309934 DOK5Q9P104 306 aa5.21□□□□□ -1.58
SEC22A-201ENST00000309934 KLHDC2Q9Y2U9 406 aa5.21□□□□□ -1.58
SEC22A-201ENST00000309934 BRWD1Q9NSI6 2320 aa5.21□□□□□ -1.58
SEC22A-201ENST00000309934 A0A0B4J2A0 478 aa5.21□□□□□ -1.58
SEC22A-201ENST00000309934 A0A1B0GTH9 108 aa5.21□□□□□ -1.58
SEC22A-201ENST00000309934 CD300LBA8K4G0 201 aa5.21□□□□□ -1.58
SEC22A-201ENST00000309934 A8MXK9 166 aa5.21□□□□□ -1.58
SEC22A-201ENST00000309934 DCTN6O00399 190 aa5.21□□□□□ -1.58
SEC22A-201ENST00000309934 SLC17A3O00476 420 aa5.21□□□□□ -1.58
SEC22A-201ENST00000309934 GDF9O60383 454 aa5.21□□□□□ -1.58
SEC22A-201ENST00000309934 CDC14BO60729 498 aa5.21□□□□□ -1.58
SEC22A-201ENST00000309934 PDCD6O75340 191 aa5.21□□□□□ -1.58
SEC22A-201ENST00000309934 GIPP09681 153 aaPredicted RBP5.21□□□□□ -1.58
SEC22A-201ENST00000309934 BMP5P22003 454 aa5.21□□□□□ -1.58
SEC22A-201ENST00000309934 CEACAM8P31997 349 aaPredicted RBP5.21□□□□□ -1.58
SEC22A-201ENST00000309934 CAV3P56539 151 aa5.21□□□□□ -1.58
SEC22A-201ENST00000309934 SNRPNP63162 240 aaKnown RBP5.21□□□□□ -1.58
SEC22A-201ENST00000309934 PAX5Q02548 391 aa5.21□□□□□ -1.58
SEC22A-201ENST00000309934 BAXQ07812 192 aa5.21□□□□□ -1.58
SEC22A-201ENST00000309934 GAGE1Q13065 139 aa5.21□□□□□ -1.58
SEC22A-201ENST00000309934 IKZF1Q13422 519 aa5.21□□□□□ -1.58
SEC22A-201ENST00000309934 PMS2P11Q13670 270 aa5.21□□□□□ -1.58
SEC22A-201ENST00000309934 CEACAM21Q3KPI0 293 aa5.21□□□□□ -1.58
SEC22A-201ENST00000309934 ACSF3Q4G176 576 aaPredicted RBP5.21□□□□□ -1.58
SEC22A-201ENST00000309934 PYY3Q5JQD4 70 aa5.21□□□□□ -1.58
SEC22A-201ENST00000309934 KCNIP4Q6PIL6 250 aa5.21□□□□□ -1.58
SEC22A-201ENST00000309934 ASCL5Q7RTU5 278 aa5.21□□□□□ -1.58
SEC22A-201ENST00000309934 ERASQ7Z444 233 aa5.21□□□□□ -1.58
SEC22A-201ENST00000309934 FAM90A1Q86YD7 464 aa5.21□□□□□ -1.58
SEC22A-201ENST00000309934 BEND2Q8NDZ0 799 aa5.21□□□□□ -1.58
SEC22A-201ENST00000309934 TMEM186Q96B77 213 aa5.21□□□□□ -1.58
SEC22A-201ENST00000309934 TRMT61AQ96FX7 289 aaKnown RBP5.21□□□□□ -1.58
SEC22A-201ENST00000309934 TIMD4Q96H15 378 aa5.21□□□□□ -1.58
SEC22A-201ENST00000309934 SFRP2Q96HF1 295 aa5.21□□□□□ -1.58
SEC22A-201ENST00000309934 CSTL1Q9H114 145 aa5.21□□□□□ -1.58
SEC22A-201ENST00000309934 C20orf85Q9H1P6 137 aa5.21□□□□□ -1.58
SEC22A-201ENST00000309934 YAE1D1Q9NRH1 226 aa5.21□□□□□ -1.58
SEC22A-201ENST00000309934 SHPKQ9UHJ6 478 aa5.21□□□□□ -1.58
SEC22A-201ENST00000309934 APC2O95996 2303 aa5.2□□□□□ -1.58
SEC22A-201ENST00000309934 HELTA6NFD8 242 aa5.2□□□□□ -1.58
SEC22A-201ENST00000309934 EREGO14944 169 aa5.2□□□□□ -1.58
SEC22A-201ENST00000309934 SYNGR3O43761 229 aa5.2□□□□□ -1.58
SEC22A-201ENST00000309934 OR7C1O76099 320 aaPredicted RBP5.2□□□□□ -1.58
SEC22A-201ENST00000309934 HAND1O96004 215 aa5.2□□□□□ -1.58
SEC22A-201ENST00000309934 PTH2RP49190 550 aa5.2□□□□□ -1.58
SEC22A-201ENST00000309934 NANOS3P60323 173 aaKnown RBP5.2□□□□□ -1.58
SEC22A-201ENST00000309934 ERVFC1-1P60608 527 aa5.2□□□□□ -1.58
SEC22A-201ENST00000309934 HERV-K104P63124 156 aa5.2□□□□□ -1.58
SEC22A-201ENST00000309934 MSMO1Q15800 293 aa5.2□□□□□ -1.58
SEC22A-201ENST00000309934 ADIRFQ15847 76 aa5.2□□□□□ -1.58
SEC22A-201ENST00000309934 IGFBP7Q16270 282 aa5.2□□□□□ -1.58
SEC22A-201ENST00000309934 TPTE2P1Q5T6R2 138 aa5.2□□□□□ -1.58
SEC22A-201ENST00000309934 RTN4RL2Q86UN3 420 aa5.2□□□□□ -1.58
SEC22A-201ENST00000309934 NIT1Q86X76 327 aa5.2□□□□□ -1.58
SEC22A-201ENST00000309934 OR52N4Q8NGI2 321 aa5.2□□□□□ -1.58
SEC22A-201ENST00000309934 OR13C5Q8NGS8 318 aa5.2□□□□□ -1.58
SEC22A-201ENST00000309934 OR52I2Q8NH67 350 aa5.2□□□□□ -1.58
SEC22A-201ENST00000309934 RNASE8Q8TDE3 154 aaKnown RBP5.2□□□□□ -1.58
SEC22A-201ENST00000309934 ZNF775Q96BV0 537 aaPredicted RBP5.2□□□□□ -1.58
SEC22A-201ENST00000309934 C5orf30Q96GV9 206 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms