RNA–Protein interactions for RNA: ENST00000306256.13

RER1-201, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 5

Gene RER1, Length 695 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-201ENST00000306256 CCDC107Q8WV48 283 aa16.2■□□□□ 0.18
RER1-201ENST00000306256 IL36GQ9NZH8 169 aa16.2■□□□□ 0.18
RER1-201ENST00000306256 IGHV1-3A0A0C4DH29 117 aa16.19■□□□□ 0.18
RER1-201ENST00000306256 TMEM30CPA0ZSE6 113 aa16.19■□□□□ 0.18
RER1-201ENST00000306256 MAGEA13PA6NCF6 341 aa16.19■□□□□ 0.18
RER1-201ENST00000306256 NUDT19A8MXV4 375 aa16.19■□□□□ 0.18
RER1-201ENST00000306256 CCRL2O00421 344 aa16.19■□□□□ 0.18
RER1-201ENST00000306256 BDKRB2P30411 391 aa16.19■□□□□ 0.18
RER1-201ENST00000306256 CCDC58Q4VC31 144 aa16.19■□□□□ 0.18
RER1-201ENST00000306256 DEFB121Q5J5C9 76 aa16.19■□□□□ 0.18
RER1-201ENST00000306256 NHLRC3Q5JS37 347 aa16.19■□□□□ 0.18
RER1-201ENST00000306256 ATAD3CQ5T2N8 411 aa16.19■□□□□ 0.18
RER1-201ENST00000306256 SLC16A12Q6ZSM3 486 aa16.19■□□□□ 0.18
RER1-201ENST00000306256 SLC35E3Q7Z769 313 aa16.19■□□□□ 0.18
RER1-201ENST00000306256 ARL11Q969Q4 196 aa16.19■□□□□ 0.18
RER1-201ENST00000306256 IFT22Q9H7X7 185 aa16.19■□□□□ 0.18
RER1-201ENST00000306256 IGHV3-43A0A0B4J1X8 118 aa16.18■□□□□ 0.18
RER1-201ENST00000306256 LINC01548A6NM66 108 aa16.18■□□□□ 0.18
RER1-201ENST00000306256 C15orf65H3BRN8 121 aa16.18■□□□□ 0.18
RER1-201ENST00000306256 SDCBPO00560 298 aaPredicted RBP16.18■□□□□ 0.18
RER1-201ENST00000306256 LALBAP00709 142 aa16.18■□□□□ 0.18
RER1-201ENST00000306256 IGHV3-43DP0DP04 118 aa16.18■□□□□ 0.18
RER1-201ENST00000306256 DCKP27707 260 aa16.18■□□□□ 0.18
RER1-201ENST00000306256 THBS3P49746 956 aa16.18■□□□□ 0.18
RER1-201ENST00000306256 ZNF816Q0VGE8 651 aaPredicted RBP16.18■□□□□ 0.18
RER1-201ENST00000306256 SLC22A6Q4U2R8 563 aa16.18■□□□□ 0.18
RER1-201ENST00000306256 C11orf87Q6NUJ2 197 aa16.18■□□□□ 0.18
RER1-201ENST00000306256 TMPRSS11AQ6ZMR5 421 aa16.18■□□□□ 0.18
RER1-201ENST00000306256 KLHL30-AS1Q8NEE0 82 aa16.18■□□□□ 0.18
RER1-201ENST00000306256 NEK7Q8TDX7 302 aa16.18■□□□□ 0.18
RER1-201ENST00000306256 S100A13Q99584 98 aa16.18■□□□□ 0.18
RER1-201ENST00000306256 ZNF184Q99676 751 aaPredicted RBP16.18■□□□□ 0.18
RER1-201ENST00000306256 IGHG2P01859 326 aa16.17■□□□□ 0.18
RER1-201ENST00000306256 GAPDHP04406 335 aaKnown RBP16.17■□□□□ 0.18
RER1-201ENST00000306256 EGFEM1PQ0D2K5 195 aa16.17■□□□□ 0.18
RER1-201ENST00000306256 RIPK1Q13546 671 aa16.17■□□□□ 0.18
RER1-201ENST00000306256 C10orf67Q8IYJ2 551 aa16.17■□□□□ 0.18
RER1-201ENST00000306256 ZFP41Q8N8Y5 198 aa16.17■□□□□ 0.18
RER1-201ENST00000306256 ZNF555Q8NEP9 628 aa16.17■□□□□ 0.18
RER1-201ENST00000306256 SMIM19Q96E16 107 aa16.17■□□□□ 0.18
RER1-201ENST00000306256 EAF1Q96JC9 268 aaPredicted RBP16.17■□□□□ 0.18
RER1-201ENST00000306256 SMPD3Q9NY59 655 aaPredicted RBP16.17■□□□□ 0.18
RER1-201ENST00000306256 CLEC2DQ9UHP7 191 aa16.17■□□□□ 0.18
RER1-201ENST00000306256 NCBP2LA6PVI3 153 aaKnown RBP16.16■□□□□ 0.18
RER1-201ENST00000306256 OGG1O15527 345 aa16.16■□□□□ 0.18
RER1-201ENST00000306256 BAG2O95816 211 aa16.16■□□□□ 0.18
RER1-201ENST00000306256 GZMHP20718 246 aa16.16■□□□□ 0.18
RER1-201ENST00000306256 SLC35B1P78383 322 aa16.16■□□□□ 0.18
RER1-201ENST00000306256 EBI3Q14213 229 aa16.16■□□□□ 0.18
RER1-201ENST00000306256 MPV17LQ2QL34 196 aa16.16■□□□□ 0.18
RER1-201ENST00000306256 LINC00596Q86U02 117 aa16.16■□□□□ 0.18
RER1-201ENST00000306256 FOXRED2Q8IWF2 684 aa16.16■□□□□ 0.18
RER1-201ENST00000306256 IZUMO1Q8IYV9 350 aa16.16■□□□□ 0.18
RER1-201ENST00000306256 STPG2Q8N412 459 aa16.16■□□□□ 0.18
RER1-201ENST00000306256 DPF1Q92782 380 aa16.16■□□□□ 0.18
RER1-201ENST00000306256 RBMXL1Q96E39 390 aaKnown RBP16.16■□□□□ 0.18
RER1-201ENST00000306256 DUX3Q96PT4 197 aa16.16■□□□□ 0.18
RER1-201ENST00000306256 PAK1IP1Q9NWT1 392 aaPredicted RBP16.16■□□□□ 0.18
RER1-201ENST00000306256 GFOD1Q9NXC2 390 aa16.16■□□□□ 0.18
RER1-201ENST00000306256 TRAV8-7A0A075B6U6 113 aa16.15■□□□□ 0.18
RER1-201ENST00000306256 TRBV5-5A0A0J9YX44 114 aa16.15■□□□□ 0.18
RER1-201ENST00000306256 AIPO00170 330 aa16.15■□□□□ 0.18
RER1-201ENST00000306256 SLC31A2O15432 143 aa16.15■□□□□ 0.18
RER1-201ENST00000306256 IGFBP3P17936 291 aaPredicted RBP16.15■□□□□ 0.18
RER1-201ENST00000306256 MYL12AP19105 171 aa16.15■□□□□ 0.18
RER1-201ENST00000306256 COL7A1Q02388 2944 aa16.15■□□□□ 0.18
RER1-201ENST00000306256 LINC00311Q8N616 119 aa16.15■□□□□ 0.18
RER1-201ENST00000306256 Q8N6K4 173 aa16.15■□□□□ 0.18
RER1-201ENST00000306256 OR52M1Q8NGK5 317 aa16.15■□□□□ 0.18
RER1-201ENST00000306256 GPR61Q9BZJ8 451 aa16.15■□□□□ 0.18
RER1-201ENST00000306256 BABAM2Q9NXR7 383 aa16.15■□□□□ 0.18
RER1-201ENST00000306256 MT-ND4P03905 459 aa16.14■□□□□ 0.17
RER1-201ENST00000306256 GTF2F2P13984 249 aa16.14■□□□□ 0.17
RER1-201ENST00000306256 GPR12P47775 334 aa16.14■□□□□ 0.17
RER1-201ENST00000306256 VAX1Q5SQQ9 334 aa16.14■□□□□ 0.17
RER1-201ENST00000306256 ZNF497Q6ZNH5 498 aa16.14■□□□□ 0.17
RER1-201ENST00000306256 LCNL1Q6ZST4 164 aa16.14■□□□□ 0.17
RER1-201ENST00000306256 TGIF2LXQ8IUE1 241 aa16.14■□□□□ 0.17
RER1-201ENST00000306256 OR2T10Q8NGZ9 312 aa16.14■□□□□ 0.17
RER1-201ENST00000306256 RTN4IP1Q8WWV3 396 aaPredicted RBP16.14■□□□□ 0.17
RER1-201ENST00000306256 GHSRQ92847 366 aa16.14■□□□□ 0.17
RER1-201ENST00000306256 MUL1Q969V5 352 aa16.14■□□□□ 0.17
RER1-201ENST00000306256 P2RX4Q99571 388 aa16.14■□□□□ 0.17
RER1-201ENST00000306256 ZFP57Q9NU63 452 aa16.14■□□□□ 0.17
RER1-201ENST00000306256 DIMT1Q9UNQ2 313 aaKnown RBP16.14■□□□□ 0.17
RER1-201ENST00000306256 EXOSC1Q9Y3B2 195 aaKnown RBP16.14■□□□□ 0.17
RER1-201ENST00000306256 A0A1W2PPK0 400 aa16.13■□□□□ 0.17
RER1-201ENST00000306256 IRGMA1A4Y4 181 aa16.13■□□□□ 0.17
RER1-201ENST00000306256 ZNF736B4DX44 427 aaPredicted RBP16.13■□□□□ 0.17
RER1-201ENST00000306256 ORC5O43913 435 aa16.13■□□□□ 0.17
RER1-201ENST00000306256 ZNF780AO75290 641 aaPredicted RBP16.13■□□□□ 0.17
RER1-201ENST00000306256 MYCNOSP40205 109 aa16.13■□□□□ 0.17
RER1-201ENST00000306256 RPS11P62280 158 aaKnown RBP eCLIP16.13■□□□□ 0.17
RER1-201ENST00000306256 DMKNQ6E0U4 476 aaPredicted RBP16.13■□□□□ 0.17
RER1-201ENST00000306256 ZNF695Q8IW36 515 aa16.13■□□□□ 0.17
RER1-201ENST00000306256 STX19Q8N4C7 294 aa16.13■□□□□ 0.17
RER1-201ENST00000306256 COMMD1Q8N668 190 aa16.13■□□□□ 0.17
RER1-201ENST00000306256 Q8N9W7 124 aa16.13■□□□□ 0.17
RER1-201ENST00000306256 TMEM104Q8NE00 496 aa16.13■□□□□ 0.17
RER1-201ENST00000306256 ST6GALNAC6Q969X2 333 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms