RNA–Protein interactions for RNA: ENST00000306085.10

TRIM56-201, Transcript of tripartite motif containing 56, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRIM56, Length 10,952 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-201ENST00000306085 C16orf92Q96LL3 132 aa11.89□□□□□ -0.51
TRIM56-201ENST00000306085 FGF17O60258 216 aa11.89□□□□□ -0.51
TRIM56-201ENST00000306085 CKS1BP61024 79 aa11.89□□□□□ -0.51
TRIM56-201ENST00000306085 ATOH7Q8N100 152 aa11.89□□□□□ -0.51
TRIM56-201ENST00000306085 STXBP6Q8NFX7 210 aa11.89□□□□□ -0.51
TRIM56-201ENST00000306085 OR11G2Q8NGC1 345 aa11.89□□□□□ -0.51
TRIM56-201ENST00000306085 OR10J6PQ8NGY7 276 aa11.89□□□□□ -0.51
TRIM56-201ENST00000306085 PSG6Q00889 435 aa11.88□□□□□ -0.51
TRIM56-201ENST00000306085 EBLN2Q6P2I7 272 aa11.88□□□□□ -0.51
TRIM56-201ENST00000306085 TBC1D29Q9UFV1 150 aa11.88□□□□□ -0.51
TRIM56-201ENST00000306085 SHISA8B8ZZ34 492 aa11.88□□□□□ -0.51
TRIM56-201ENST00000306085 CCL2P13500 99 aa11.88□□□□□ -0.51
TRIM56-201ENST00000306085 GPX2P18283 190 aa11.88□□□□□ -0.51
TRIM56-201ENST00000306085 MORN4Q8NDC4 146 aa11.88□□□□□ -0.51
TRIM56-201ENST00000306085 DAPP1Q9UN19 280 aa11.88□□□□□ -0.51
TRIM56-201ENST00000306085 MYLKQ15746 1914 aa11.88□□□□□ -0.51
TRIM56-201ENST00000306085 LEUTXA8MZ59 168 aa11.88□□□□□ -0.51
TRIM56-201ENST00000306085 DEFB103AP81534 67 aa11.88□□□□□ -0.51
TRIM56-201ENST00000306085 GPR27Q9NS67 375 aa11.88□□□□□ -0.51
TRIM56-201ENST00000306085 MRC1P22897 1456 aa11.88□□□□□ -0.51
TRIM56-201ENST00000306085 ZNF117Q03924 483 aa11.88□□□□□ -0.51
TRIM56-201ENST00000306085 NSUN5P2Q63ZY6 315 aa11.88□□□□□ -0.51
TRIM56-201ENST00000306085 PTCRAQ6ISU1 281 aaPredicted RBP11.88□□□□□ -0.51
TRIM56-201ENST00000306085 DLEU7Q6UYE1 221 aa11.88□□□□□ -0.51
TRIM56-201ENST00000306085 OR2V1Q8NHB1 315 aa11.88□□□□□ -0.51
TRIM56-201ENST00000306085 RBKSQ9H477 322 aa11.88□□□□□ -0.51
TRIM56-201ENST00000306085 ZNF205O95201 554 aa11.88□□□□□ -0.51
TRIM56-201ENST00000306085 H0Y8X5 98 aa11.88□□□□□ -0.51
TRIM56-201ENST00000306085 GFYI3L273 518 aa11.88□□□□□ -0.51
TRIM56-201ENST00000306085 CD81P60033 236 aa11.88□□□□□ -0.51
TRIM56-201ENST00000306085 SPICQ8N5J4 248 aa11.88□□□□□ -0.51
TRIM56-201ENST00000306085 ZNF665Q9H7R5 613 aa11.88□□□□□ -0.51
TRIM56-201ENST00000306085 HDGFL3Q9Y3E1 203 aa11.88□□□□□ -0.51
TRIM56-201ENST00000306085 PLXNB1O43157 2135 aa11.88□□□□□ -0.51
TRIM56-201ENST00000306085 TSPAN2O60636 221 aa11.88□□□□□ -0.51
TRIM56-201ENST00000306085 EPHA8P29322 1005 aaPredicted RBP11.88□□□□□ -0.51
TRIM56-201ENST00000306085 SGMS2Q8NHU3 365 aa11.88□□□□□ -0.51
TRIM56-201ENST00000306085 HIGD1AQ9Y241 93 aa11.88□□□□□ -0.51
TRIM56-201ENST00000306085 FRG2CA6NGY1 282 aa11.88□□□□□ -0.51
TRIM56-201ENST00000306085 C1QTNF9BB2RNN3 333 aa11.88□□□□□ -0.51
TRIM56-201ENST00000306085 CDS2O95674 445 aa11.88□□□□□ -0.51
TRIM56-201ENST00000306085 PMELP40967 661 aa11.88□□□□□ -0.51
TRIM56-201ENST00000306085 GUCA2BQ16661 112 aa11.88□□□□□ -0.51
TRIM56-201ENST00000306085 B9D1Q9UPM9 204 aa11.88□□□□□ -0.51
TRIM56-201ENST00000306085 LOXL2Q9Y4K0 774 aa11.88□□□□□ -0.51
TRIM56-201ENST00000306085 TRAV12-3A0A0B4J271 114 aa11.87□□□□□ -0.51
TRIM56-201ENST00000306085 METRNLQ641Q3 311 aa11.87□□□□□ -0.51
TRIM56-201ENST00000306085 PRELID3AQ96N28 172 aa11.87□□□□□ -0.51
TRIM56-201ENST00000306085 FAM3BP58499 235 aaPredicted RBP11.87□□□□□ -0.51
TRIM56-201ENST00000306085 NAAAQ02083 359 aa11.87□□□□□ -0.51
TRIM56-201ENST00000306085 FOXF1Q12946 379 aa11.87□□□□□ -0.51
TRIM56-201ENST00000306085 CREBBPQ92793 2442 aa11.87□□□□□ -0.51
TRIM56-201ENST00000306085 HOXA6P31267 233 aa11.87□□□□□ -0.51
TRIM56-201ENST00000306085 ASB16Q96NS5 453 aa11.87□□□□□ -0.51
TRIM56-201ENST00000306085 P2RX4Q99571 388 aa11.87□□□□□ -0.51
TRIM56-201ENST00000306085 FOXJ2Q9P0K8 574 aa11.87□□□□□ -0.51
TRIM56-201ENST00000306085 HS3ST2Q9Y278 367 aa11.87□□□□□ -0.51
TRIM56-201ENST00000306085 MYOM1P52179 1685 aa11.87□□□□□ -0.51
TRIM56-201ENST00000306085 FOXO1Q12778 655 aa11.87□□□□□ -0.51
TRIM56-201ENST00000306085 PGLYRP4Q96LB8 373 aa11.87□□□□□ -0.51
TRIM56-201ENST00000306085 GHITMQ9H3K2 345 aa11.87□□□□□ -0.51
TRIM56-201ENST00000306085 KCNE3Q9Y6H6 103 aa11.87□□□□□ -0.51
TRIM56-201ENST00000306085 MOSPD3O75425 235 aa11.87□□□□□ -0.51
TRIM56-201ENST00000306085 GP1BAP07359 652 aa11.87□□□□□ -0.51
TRIM56-201ENST00000306085 SNRPCP09234 159 aaKnown RBP11.87□□□□□ -0.51
TRIM56-201ENST00000306085 PRR14LQ5THK1 2151 aa11.87□□□□□ -0.51
TRIM56-201ENST00000306085 FAM74A4Q5TZK3 123 aa11.87□□□□□ -0.51
TRIM56-201ENST00000306085 VSTM2AQ8TAG5 236 aa11.87□□□□□ -0.51
TRIM56-201ENST00000306085 SMOC1Q9H4F8 434 aa11.87□□□□□ -0.51
TRIM56-201ENST00000306085 FREM1Q5H8C1 2179 aa11.87□□□□□ -0.51
TRIM56-201ENST00000306085 MDKP21741 143 aaPredicted RBP11.87□□□□□ -0.51
TRIM56-201ENST00000306085 ZNF774Q6NX45 483 aa11.87□□□□□ -0.51
TRIM56-201ENST00000306085 JMJD6Q6NYC1 403 aaPredicted RBP11.87□□□□□ -0.51
TRIM56-201ENST00000306085 SLC25A34Q6PIV7 304 aa11.87□□□□□ -0.51
TRIM56-201ENST00000306085 RAB33BQ9H082 229 aa11.87□□□□□ -0.51
TRIM56-201ENST00000306085 LINC01553A4QN01 128 aa11.87□□□□□ -0.51
TRIM56-201ENST00000306085 SPINK2P20155 84 aa11.87□□□□□ -0.51
TRIM56-201ENST00000306085 PARP11Q9NR21 331 aa11.87□□□□□ -0.51
TRIM56-201ENST00000306085 KIDINS220Q9ULH0 1771 aa11.87□□□□□ -0.51
TRIM56-201ENST00000306085 LNP1A1A4G5 178 aa11.87□□□□□ -0.51
TRIM56-201ENST00000306085 CHST1O43916 411 aa11.87□□□□□ -0.51
TRIM56-201ENST00000306085 OR10AG1Q8NH19 301 aa11.87□□□□□ -0.51
TRIM56-201ENST00000306085 DDA1Q9BW61 102 aa11.87□□□□□ -0.51
TRIM56-201ENST00000306085 METTL12A8MUP2 240 aa11.86□□□□□ -0.51
TRIM56-201ENST00000306085 TMEM262E9PQX1 116 aa11.86□□□□□ -0.51
TRIM56-201ENST00000306085 CA1P00915 261 aaPredicted RBP11.86□□□□□ -0.51
TRIM56-201ENST00000306085 Q7L0L9 218 aa11.86□□□□□ -0.51
TRIM56-201ENST00000306085 OR4B1Q8NGF8 309 aa11.86□□□□□ -0.51
TRIM56-201ENST00000306085 SPSB1Q96BD6 273 aa11.86□□□□□ -0.51
TRIM56-201ENST00000306085 ZGLP1P0C6A0 271 aa11.86□□□□□ -0.51
TRIM56-201ENST00000306085 C15orf39Q6ZRI6 1047 aa11.86□□□□□ -0.51
TRIM56-201ENST00000306085 GALNSP34059 522 aa11.86□□□□□ -0.51
TRIM56-201ENST00000306085 OTOSQ8NHW6 89 aa11.86□□□□□ -0.51
TRIM56-201ENST00000306085 CDC42EP3Q9UKI2 254 aa11.86□□□□□ -0.51
TRIM56-201ENST00000306085 ABLIM3O94929 683 aa11.86□□□□□ -0.51
TRIM56-201ENST00000306085 PRSS54Q6PEW0 395 aa11.86□□□□□ -0.51
TRIM56-201ENST00000306085 OR10D3Q8NH80 312 aa11.86□□□□□ -0.51
TRIM56-201ENST00000306085 MAP1LC3AQ9H492 121 aa11.86□□□□□ -0.51
TRIM56-201ENST00000306085 NEURL4Q96JN8 1562 aa11.86□□□□□ -0.51
TRIM56-201ENST00000306085 KIF13BQ9NQT8 1826 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms