RNA–Protein interactions for RNA: ENST00000304465.7

SRGAP2C-201, Transcript of SLIT-ROBO Rho GTPase activating protein 2C, humanhuman

TSL 5 BASIC

Gene SRGAP2C, Length 1,477 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2C-201ENST00000304465 SSBP1Q04837 148 aaKnown RBP13.23□□□□□ -0.29
SRGAP2C-201ENST00000304465 METTL11BQ5VVY1 283 aa13.23□□□□□ -0.29
SRGAP2C-201ENST00000304465 BRICD5Q6PL45 260 aa13.23□□□□□ -0.29
SRGAP2C-201ENST00000304465 ACP7Q6ZNF0 438 aa13.23□□□□□ -0.29
SRGAP2C-201ENST00000304465 BTN2A1Q7KYR7 527 aa13.23□□□□□ -0.29
SRGAP2C-201ENST00000304465 LINC00596Q86U02 117 aa13.23□□□□□ -0.29
SRGAP2C-201ENST00000304465 CENPSQ8N2Z9 138 aa13.23□□□□□ -0.29
SRGAP2C-201ENST00000304465 CCL13Q99616 98 aa13.23□□□□□ -0.29
SRGAP2C-201ENST00000304465 ESM1Q9NQ30 184 aa13.23□□□□□ -0.29
SRGAP2C-201ENST00000304465 NKX6-3A6NJ46 265 aa13.23□□□□□ -0.29
SRGAP2C-201ENST00000304465 NDUFB3O43676 98 aa13.23□□□□□ -0.29
SRGAP2C-201ENST00000304465 RBBP9O75884 186 aa13.23□□□□□ -0.29
SRGAP2C-201ENST00000304465 OR7C1O76099 320 aaPredicted RBP13.23□□□□□ -0.29
SRGAP2C-201ENST00000304465 NXPH2O95156 264 aa13.23□□□□□ -0.29
SRGAP2C-201ENST00000304465 PTTG1O95997 202 aa13.23□□□□□ -0.29
SRGAP2C-201ENST00000304465 NAT1P18440 290 aa13.23□□□□□ -0.29
SRGAP2C-201ENST00000304465 PRTN3P24158 256 aa13.23□□□□□ -0.29
SRGAP2C-201ENST00000304465 BPIFB3P59826 476 aa13.23□□□□□ -0.29
SRGAP2C-201ENST00000304465 DYRK1AQ13627 763 aa13.23□□□□□ -0.29
SRGAP2C-201ENST00000304465 NKAPLQ5M9Q1 402 aa13.23□□□□□ -0.29
SRGAP2C-201ENST00000304465 ZNF57Q68EA5 555 aaPredicted RBP13.23□□□□□ -0.29
SRGAP2C-201ENST00000304465 Q6ZPA2 131 aa13.23□□□□□ -0.29
SRGAP2C-201ENST00000304465 TRAPPC6BQ86SZ2 158 aa13.23□□□□□ -0.29
SRGAP2C-201ENST00000304465 TOMM5Q8N4H5 51 aa13.23□□□□□ -0.29
SRGAP2C-201ENST00000304465 GVQW1Q8N7I0 195 aa13.23□□□□□ -0.29
SRGAP2C-201ENST00000304465 DUX5Q96PT3 197 aa13.23□□□□□ -0.29
SRGAP2C-201ENST00000304465 OCSTAMPQ9BR26 566 aa13.23□□□□□ -0.29
SRGAP2C-201ENST00000304465 PLEKHJ1Q9NW61 149 aa13.23□□□□□ -0.29
SRGAP2C-201ENST00000304465 AK3Q9UIJ7 227 aa13.23□□□□□ -0.29
SRGAP2C-201ENST00000304465 A0A1B0GVG6 124 aa13.22□□□□□ -0.29
SRGAP2C-201ENST00000304465 TMEM89A2RUT3 159 aa13.22□□□□□ -0.29
SRGAP2C-201ENST00000304465 DNAJC9-AS1A6NH13 148 aa13.22□□□□□ -0.29
SRGAP2C-201ENST00000304465 LYRM1O43325 122 aa13.22□□□□□ -0.29
SRGAP2C-201ENST00000304465 DEFA1P59665 94 aa13.22□□□□□ -0.29
SRGAP2C-201ENST00000304465 DEFA3P59666 94 aa13.22□□□□□ -0.29
SRGAP2C-201ENST00000304465 IKZF1Q13422 519 aa13.22□□□□□ -0.29
SRGAP2C-201ENST00000304465 ARL6IP1Q15041 203 aa13.22□□□□□ -0.29
SRGAP2C-201ENST00000304465 LRRC10Q5BKY1 277 aa13.22□□□□□ -0.29
SRGAP2C-201ENST00000304465 Q6ZNX1 250 aa13.22□□□□□ -0.29
SRGAP2C-201ENST00000304465 C9orf139Q6ZV77 190 aa13.22□□□□□ -0.29
SRGAP2C-201ENST00000304465 NRARPQ7Z6K4 114 aa13.22□□□□□ -0.29
SRGAP2C-201ENST00000304465 C3orf56Q8N813 242 aa13.22□□□□□ -0.29
SRGAP2C-201ENST00000304465 OR5T2Q8NGG2 359 aa13.22□□□□□ -0.29
SRGAP2C-201ENST00000304465 DYRK2Q92630 601 aa13.22□□□□□ -0.29
SRGAP2C-201ENST00000304465 ZDHHC16Q969W1 377 aa13.22□□□□□ -0.29
SRGAP2C-201ENST00000304465 NEDD4LQ96PU5 975 aa13.22□□□□□ -0.29
SRGAP2C-201ENST00000304465 HDHD3Q9BSH5 251 aaPredicted RBP13.22□□□□□ -0.29
SRGAP2C-201ENST00000304465 GPR37O15354 613 aa13.21□□□□□ -0.3
SRGAP2C-201ENST00000304465 FCER2P06734 321 aa13.21□□□□□ -0.3
SRGAP2C-201ENST00000304465 GLRA1P23415 457 aa13.21□□□□□ -0.3
SRGAP2C-201ENST00000304465 GNG2P59768 71 aa13.21□□□□□ -0.3
SRGAP2C-201ENST00000304465 SPIN3Q5JUX0 258 aa13.21□□□□□ -0.3
SRGAP2C-201ENST00000304465 BRD3OSQ6XYD6 125 aa13.21□□□□□ -0.3
SRGAP2C-201ENST00000304465 FAM216BQ8N7L0 139 aa13.21□□□□□ -0.3
SRGAP2C-201ENST00000304465 SUMF2Q8NBJ7 301 aa13.21□□□□□ -0.3
SRGAP2C-201ENST00000304465 SNAPC3Q92966 411 aa13.21□□□□□ -0.3
SRGAP2C-201ENST00000304465 MED30Q96HR3 178 aa13.21□□□□□ -0.3
SRGAP2C-201ENST00000304465 DNTTIP1Q9H147 329 aa13.21□□□□□ -0.3
SRGAP2C-201ENST00000304465 HRASLSQ9HDD0 168 aa13.21□□□□□ -0.3
SRGAP2C-201ENST00000304465 RASL12Q9NYN1 266 aa13.21□□□□□ -0.3
SRGAP2C-201ENST00000304465 ZNF107Q9UII5 783 aaPredicted RBP13.21□□□□□ -0.3
SRGAP2C-201ENST00000304465 UBE2QL1A1L167 161 aa13.2□□□□□ -0.3
SRGAP2C-201ENST00000304465 SLC33A1O00400 549 aaPredicted RBP13.2□□□□□ -0.3
SRGAP2C-201ENST00000304465 OR2H2O95918 312 aa13.2□□□□□ -0.3
SRGAP2C-201ENST00000304465 KNG1P01042 644 aa13.2□□□□□ -0.3
SRGAP2C-201ENST00000304465 CD74P04233 296 aa13.2□□□□□ -0.3
SRGAP2C-201ENST00000304465 LMO1P25800 156 aa13.2□□□□□ -0.3
SRGAP2C-201ENST00000304465 ACTBP60709 375 aa13.2□□□□□ -0.3
SRGAP2C-201ENST00000304465 ARF6P62330 175 aa13.2□□□□□ -0.3
SRGAP2C-201ENST00000304465 ATAD3CQ5T2N8 411 aa13.2□□□□□ -0.3
SRGAP2C-201ENST00000304465 TMEM229BQ8NBD8 167 aa13.2□□□□□ -0.3
SRGAP2C-201ENST00000304465 OR4D10Q8NGI6 311 aa13.2□□□□□ -0.3
SRGAP2C-201ENST00000304465 H1FXQ92522 213 aaKnown RBP13.2□□□□□ -0.3
SRGAP2C-201ENST00000304465 ZNF48Q96MX3 618 aaPredicted RBP13.2□□□□□ -0.3
SRGAP2C-201ENST00000304465 SEBOXQ9HB31 216 aaPredicted RBP13.2□□□□□ -0.3
SRGAP2C-201ENST00000304465 NLKQ9UBE8 527 aa13.2□□□□□ -0.3
SRGAP2C-201ENST00000304465 RPUSD1Q9UJJ7 312 aaKnown RBP13.2□□□□□ -0.3
SRGAP2C-201ENST00000304465 DOCK11Q5JSL3 2073 aa13.2□□□□□ -0.3
SRGAP2C-201ENST00000304465 DEGS1O15121 323 aa13.19□□□□□ -0.3
SRGAP2C-201ENST00000304465 MT-ND4P03905 459 aa13.19□□□□□ -0.3
SRGAP2C-201ENST00000304465 TFF1P04155 84 aa13.19□□□□□ -0.3
SRGAP2C-201ENST00000304465 CD3DP04234 171 aa13.19□□□□□ -0.3
SRGAP2C-201ENST00000304465 GLAP06280 429 aa13.19□□□□□ -0.3
SRGAP2C-201ENST00000304465 CSF1P09603 554 aa13.19□□□□□ -0.3
SRGAP2C-201ENST00000304465 GSTT2BP0CG30 244 aa13.19□□□□□ -0.3
SRGAP2C-201ENST00000304465 SLC6A1P30531 599 aa13.19□□□□□ -0.3
SRGAP2C-201ENST00000304465 RCVRNP35243 200 aa13.19□□□□□ -0.3
SRGAP2C-201ENST00000304465 GABRA2P47869 451 aa13.19□□□□□ -0.3
SRGAP2C-201ENST00000304465 INPP1P49441 399 aa13.19□□□□□ -0.3
SRGAP2C-201ENST00000304465 CEBPDP49716 269 aaPredicted RBP13.19□□□□□ -0.3
SRGAP2C-201ENST00000304465 COMPP49747 757 aaPredicted RBP13.19□□□□□ -0.3
SRGAP2C-201ENST00000304465 IL13RA1P78552 427 aa13.19□□□□□ -0.3
SRGAP2C-201ENST00000304465 FOXL1Q12952 345 aa13.19□□□□□ -0.3
SRGAP2C-201ENST00000304465 ARFRP1Q13795 201 aa13.19□□□□□ -0.3
SRGAP2C-201ENST00000304465 PLA1AQ53H76 456 aa13.19□□□□□ -0.3
SRGAP2C-201ENST00000304465 ATPAF1Q5TC12 328 aaPredicted RBP13.19□□□□□ -0.3
SRGAP2C-201ENST00000304465 STUMQ69YW2 141 aa13.19□□□□□ -0.3
SRGAP2C-201ENST00000304465 OR52W1Q6IF63 320 aa13.19□□□□□ -0.3
SRGAP2C-201ENST00000304465 HOGA1Q86XE5 327 aa13.19□□□□□ -0.3
SRGAP2C-201ENST00000304465 MINDY2Q8NBR6 621 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms