RNA–Protein interactions for RNA: ENST00000304236.2

RAB40A-201, Transcript of RAB40A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB40A, Length 1,969 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40A-201ENST00000304236 GNG3P63215 75 aa12.12□□□□□ -0.47
RAB40A-201ENST00000304236 SPIN3Q5JUX0 258 aa12.12□□□□□ -0.47
RAB40A-201ENST00000304236 NUFIP2Q7Z417 695 aaKnown RBP12.12□□□□□ -0.47
RAB40A-201ENST00000304236 DMBX1Q8NFW5 382 aa12.12□□□□□ -0.47
RAB40A-201ENST00000304236 PKIBQ9C010 78 aa12.12□□□□□ -0.47
RAB40A-201ENST00000304236 GP6Q9HCN6 339 aa12.12□□□□□ -0.47
RAB40A-201ENST00000304236 TSPAN15O95858 294 aa12.11□□□□□ -0.47
RAB40A-201ENST00000304236 NGFP01138 241 aa12.11□□□□□ -0.47
RAB40A-201ENST00000304236 HEXAP06865 529 aa12.11□□□□□ -0.47
RAB40A-201ENST00000304236 SFTA3P0C7M3 94 aa12.11□□□□□ -0.47
RAB40A-201ENST00000304236 S100GP29377 79 aa12.11□□□□□ -0.47
RAB40A-201ENST00000304236 NKX2-1P43699 371 aaPredicted RBP12.11□□□□□ -0.47
RAB40A-201ENST00000304236 SELENOHQ8IZQ5 122 aaKnown RBP12.11□□□□□ -0.47
RAB40A-201ENST00000304236 BATF2Q8N1L9 274 aa12.11□□□□□ -0.47
RAB40A-201ENST00000304236 SECTM1Q8WVN6 248 aa12.11□□□□□ -0.47
RAB40A-201ENST00000304236 IL22RA2Q969J5 263 aa12.11□□□□□ -0.47
RAB40A-201ENST00000304236 KIRREL1Q96J84 757 aa12.11□□□□□ -0.47
RAB40A-201ENST00000304236 WFDC1Q9HC57 220 aa12.11□□□□□ -0.47
RAB40A-201ENST00000304236 CRIM1Q9NZV1 1036 aa12.11□□□□□ -0.47
RAB40A-201ENST00000304236 CLEC18AA5D8T8 446 aa12.1□□□□□ -0.47
RAB40A-201ENST00000304236 NKX2-6A6NCS4 301 aa12.1□□□□□ -0.47
RAB40A-201ENST00000304236 J3QW42 95 aa12.1□□□□□ -0.47
RAB40A-201ENST00000304236 SCTP09683 121 aa12.1□□□□□ -0.47
RAB40A-201ENST00000304236 GLI4P10075 376 aa12.1□□□□□ -0.47
RAB40A-201ENST00000304236 MMP9P14780 707 aa12.1□□□□□ -0.47
RAB40A-201ENST00000304236 PRKACAP17612 351 aa12.1□□□□□ -0.47
RAB40A-201ENST00000304236 UCP2P55851 309 aa12.1□□□□□ -0.47
RAB40A-201ENST00000304236 IL24Q13007 206 aa12.1□□□□□ -0.47
RAB40A-201ENST00000304236 PEA15Q15121 130 aa12.1□□□□□ -0.47
RAB40A-201ENST00000304236 CMTM1Q8IZ96 169 aa12.1□□□□□ -0.47
RAB40A-201ENST00000304236 ZFP62Q8NB50 900 aaPredicted RBP12.1□□□□□ -0.47
RAB40A-201ENST00000304236 CLEC18CQ8NCF0 446 aa12.1□□□□□ -0.47
RAB40A-201ENST00000304236 OR1K1Q8NGR3 316 aa12.1□□□□□ -0.47
RAB40A-201ENST00000304236 BSCL2Q96G97 398 aaPredicted RBP12.1□□□□□ -0.47
RAB40A-201ENST00000304236 SLC25A31Q9H0C2 315 aa12.1□□□□□ -0.47
RAB40A-201ENST00000304236 C11orf1Q9H5F2 150 aa12.1□□□□□ -0.47
RAB40A-201ENST00000304236 ZNF552Q9H707 407 aaPredicted RBP12.1□□□□□ -0.47
RAB40A-201ENST00000304236 ZDHHC8Q9ULC8 765 aa12.1□□□□□ -0.47
RAB40A-201ENST00000304236 KPTNQ9Y664 436 aa12.1□□□□□ -0.47
RAB40A-201ENST00000304236 ARID1AO14497 2285 aa12.1□□□□□ -0.47
RAB40A-201ENST00000304236 SLC22A20A6NK97 555 aa12.1□□□□□ -0.47
RAB40A-201ENST00000304236 CYSRT1A8MQ03 144 aa12.1□□□□□ -0.47
RAB40A-201ENST00000304236 UCP1P25874 307 aa12.1□□□□□ -0.47
RAB40A-201ENST00000304236 CD80P33681 288 aa12.1□□□□□ -0.47
RAB40A-201ENST00000304236 NPBWR1P48145 328 aa12.1□□□□□ -0.47
RAB40A-201ENST00000304236 TMEM88Q6PEY1 159 aa12.1□□□□□ -0.47
RAB40A-201ENST00000304236 GAPTQ8N292 157 aa12.1□□□□□ -0.47
RAB40A-201ENST00000304236 OR2C3Q8N628 320 aa12.1□□□□□ -0.47
RAB40A-201ENST00000304236 SUMF2Q8NBJ7 301 aa12.1□□□□□ -0.47
RAB40A-201ENST00000304236 BCL2L2Q92843 193 aaPredicted RBP12.1□□□□□ -0.47
RAB40A-201ENST00000304236 BOD1Q96IK1 185 aa12.1□□□□□ -0.47
RAB40A-201ENST00000304236 IFT22Q9H7X7 185 aa12.1□□□□□ -0.47
RAB40A-201ENST00000304236 PRELID3BQ9Y3B1 194 aa12.1□□□□□ -0.47
RAB40A-201ENST00000304236 UBR5O95071 2799 aaPredicted RBP12.1□□□□□ -0.47
RAB40A-201ENST00000304236 ARHGAP21Q5T5U3 1957 aa12.09□□□□□ -0.47
RAB40A-201ENST00000304236 SYNGR1O43759 233 aa12.09□□□□□ -0.47
RAB40A-201ENST00000304236 VDAC1P21796 283 aa12.09□□□□□ -0.47
RAB40A-201ENST00000304236 SNCAP37840 140 aa12.09□□□□□ -0.47
RAB40A-201ENST00000304236 CAMLGP49069 296 aa12.09□□□□□ -0.47
RAB40A-201ENST00000304236 EWSR1Q01844 656 aaKnown RBP eCLIP12.09□□□□□ -0.47
RAB40A-201ENST00000304236 SRSF1Q07955 248 aaKnown RBP eCLIP12.09□□□□□ -0.47
RAB40A-201ENST00000304236 ZNF266Q14584 549 aa12.09□□□□□ -0.47
RAB40A-201ENST00000304236 HFEQ30201 348 aa12.09□□□□□ -0.47
RAB40A-201ENST00000304236 FBXW9Q5XUX1 488 aa12.09□□□□□ -0.47
RAB40A-201ENST00000304236 ZNF880Q6PDB4 577 aa12.09□□□□□ -0.47
RAB40A-201ENST00000304236 ZNF818PQ6ZRF7 136 aa12.09□□□□□ -0.47
RAB40A-201ENST00000304236 FAM58AQ8N1B3 248 aa12.09□□□□□ -0.47
RAB40A-201ENST00000304236 MRPL30Q8TCC3 161 aaKnown RBP12.09□□□□□ -0.47
RAB40A-201ENST00000304236 HS3ST6Q96QI5 342 aa12.09□□□□□ -0.47
RAB40A-201ENST00000304236 USB1Q9BQ65 265 aaKnown RBP12.09□□□□□ -0.47
RAB40A-201ENST00000304236 PLEKHF2Q9H8W4 249 aa12.09□□□□□ -0.47
RAB40A-201ENST00000304236 CACFD1Q9UGQ2 172 aa12.09□□□□□ -0.47
RAB40A-201ENST00000304236 FAM157AC9JC47 383 aa12.09□□□□□ -0.47
RAB40A-201ENST00000304236 OR8U9P0C7N5 309 aa12.09□□□□□ -0.47
RAB40A-201ENST00000304236 WNT5AP41221 380 aa12.09□□□□□ -0.47
RAB40A-201ENST00000304236 VAMP2P63027 116 aa12.09□□□□□ -0.47
RAB40A-201ENST00000304236 NHLH2Q02577 135 aa12.09□□□□□ -0.47
RAB40A-201ENST00000304236 HERPUD1Q15011 391 aa12.09□□□□□ -0.47
RAB40A-201ENST00000304236 CLEC9AQ6UXN8 241 aa12.09□□□□□ -0.47
RAB40A-201ENST00000304236 OR5D13Q8NGL4 314 aa12.09□□□□□ -0.47
RAB40A-201ENST00000304236 OR8U1Q8NH10 309 aa12.09□□□□□ -0.47
RAB40A-201ENST00000304236 WNT2BQ93097 391 aa12.09□□□□□ -0.47
RAB40A-201ENST00000304236 ADAT1Q9BUB4 502 aaKnown RBP12.09□□□□□ -0.47
RAB40A-201ENST00000304236 C19orf12Q9NSK7 152 aa12.09□□□□□ -0.47
RAB40A-201ENST00000304236 PRSS50Q9UI38 385 aa12.09□□□□□ -0.47
RAB40A-201ENST00000304236 ZNF175Q9Y473 711 aa12.09□□□□□ -0.47
RAB40A-201ENST00000304236 HECTD1Q9ULT8 2610 aa12.08□□□□□ -0.47
RAB40A-201ENST00000304236 LRP5LA4QPB2 252 aa12.08□□□□□ -0.48
RAB40A-201ENST00000304236 H0Y980 276 aa12.08□□□□□ -0.48
RAB40A-201ENST00000304236 AGPAT2O15120 278 aa12.08□□□□□ -0.48
RAB40A-201ENST00000304236 PITX3O75364 302 aa12.08□□□□□ -0.48
RAB40A-201ENST00000304236 CEACAM4O75871 244 aa12.08□□□□□ -0.48
RAB40A-201ENST00000304236 MDH2P40926 338 aaKnown RBP12.08□□□□□ -0.48
RAB40A-201ENST00000304236 TSC22D1Q15714 1073 aa12.08□□□□□ -0.48
RAB40A-201ENST00000304236 MIDNQ504T8 468 aa12.08□□□□□ -0.48
RAB40A-201ENST00000304236 CBLN2Q8IUK8 224 aa12.08□□□□□ -0.48
RAB40A-201ENST00000304236 LFNGQ8NES3 379 aa12.08□□□□□ -0.48
RAB40A-201ENST00000304236 WDYHV1Q96HA8 205 aa12.08□□□□□ -0.48
RAB40A-201ENST00000304236 IL36RNQ9UBH0 155 aa12.08□□□□□ -0.48
RAB40A-201ENST00000304236 MLXQ9UH92 298 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms