RNA–Protein interactions for RNA: ENST00000297267.13

FNDC1-201, Transcript of fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FNDC1, Length 6,552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC1-201ENST00000297267 LDLRAD3Q86YD5 345 aa13.49□□□□□ -0.25
FNDC1-201ENST00000297267 BVESQ8NE79 360 aa13.49□□□□□ -0.25
FNDC1-201ENST00000297267 SLC52A3Q9NQ40 469 aa13.49□□□□□ -0.25
FNDC1-201ENST00000297267 ANXA10Q9UJ72 324 aa13.49□□□□□ -0.25
FNDC1-201ENST00000297267 hADV38S2A0JD32 116 aa13.49□□□□□ -0.25
FNDC1-201ENST00000297267 LDLRAD4O15165 306 aa13.49□□□□□ -0.25
FNDC1-201ENST00000297267 GUCA2BQ16661 112 aa13.49□□□□□ -0.25
FNDC1-201ENST00000297267 CYB5R2Q6BCY4 276 aa13.49□□□□□ -0.25
FNDC1-201ENST00000297267 SLC36A1Q7Z2H8 476 aa13.49□□□□□ -0.25
FNDC1-201ENST00000297267 ARRDC1Q8N5I2 433 aa13.49□□□□□ -0.25
FNDC1-201ENST00000297267 OR4A4PQ8NGN8 299 aa13.49□□□□□ -0.25
FNDC1-201ENST00000297267 GPR35Q9HC97 309 aa13.49□□□□□ -0.25
FNDC1-201ENST00000297267 CYB5R3P00387 301 aaPredicted RBP13.49□□□□□ -0.25
FNDC1-201ENST00000297267 VSIG8P0DPA2 414 aa13.49□□□□□ -0.25
FNDC1-201ENST00000297267 RANP62826 216 aaKnown RBP13.49□□□□□ -0.25
FNDC1-201ENST00000297267 D2HGDHQ8N465 521 aa13.49□□□□□ -0.25
FNDC1-201ENST00000297267 PSMB2P49721 201 aa13.49□□□□□ -0.25
FNDC1-201ENST00000297267 C5orf17Q8NAS9 161 aa13.49□□□□□ -0.25
FNDC1-201ENST00000297267 TMEM56Q96MV1 263 aa13.49□□□□□ -0.25
FNDC1-201ENST00000297267 SLC7A10Q9NS82 523 aa13.49□□□□□ -0.25
FNDC1-201ENST00000297267 PRSS1P07477 247 aa13.48□□□□□ -0.25
FNDC1-201ENST00000297267 SUMO3P55854 103 aaPredicted RBP13.48□□□□□ -0.25
FNDC1-201ENST00000297267 HLA-DRB3P79483 266 aa13.48□□□□□ -0.25
FNDC1-201ENST00000297267 C8orf82Q6P1X6 216 aaPredicted RBP13.48□□□□□ -0.25
FNDC1-201ENST00000297267 PDPNQ86YL7 162 aa13.48□□□□□ -0.25
FNDC1-201ENST00000297267 OGG1O15527 345 aa13.48□□□□□ -0.25
FNDC1-201ENST00000297267 MBPP02686 304 aaPredicted RBP13.48□□□□□ -0.25
FNDC1-201ENST00000297267 MRPS11P82912 194 aaKnown RBP13.48□□□□□ -0.25
FNDC1-201ENST00000297267 CEBPEQ15744 281 aa13.48□□□□□ -0.25
FNDC1-201ENST00000297267 HCP5Q6MZN7 132 aa13.48□□□□□ -0.25
FNDC1-201ENST00000297267 OR4X1Q8NH49 305 aa13.48□□□□□ -0.25
FNDC1-201ENST00000297267 SAP30LQ9HAJ7 183 aa13.48□□□□□ -0.25
FNDC1-201ENST00000297267 GSTZ1O43708 216 aaPredicted RBP13.48□□□□□ -0.25
FNDC1-201ENST00000297267 UBALD2Q8IYN6 164 aa13.48□□□□□ -0.25
FNDC1-201ENST00000297267 OR2M3Q8NG83 312 aa13.48□□□□□ -0.25
FNDC1-201ENST00000297267 REPIN1Q9BWE0 567 aaKnown RBP13.48□□□□□ -0.25
FNDC1-201ENST00000297267 IL11RAQ14626 422 aa13.48□□□□□ -0.25
FNDC1-201ENST00000297267 CCL13Q99616 98 aa13.48□□□□□ -0.25
FNDC1-201ENST00000297267 TRAV38-1A0A0B4J264 116 aa13.48□□□□□ -0.25
FNDC1-201ENST00000297267 IGHV3-66A0A0C4DH42 116 aa13.48□□□□□ -0.25
FNDC1-201ENST00000297267 FXYD3Q14802 87 aa13.48□□□□□ -0.25
FNDC1-201ENST00000297267 Q5BKY6 102 aa13.48□□□□□ -0.25
FNDC1-201ENST00000297267 TMEM255AQ5JRV8 349 aa13.48□□□□□ -0.25
FNDC1-201ENST00000297267 PACRGQ96M98 296 aaPredicted RBP13.48□□□□□ -0.25
FNDC1-201ENST00000297267 IFT22Q9H7X7 185 aa13.48□□□□□ -0.25
FNDC1-201ENST00000297267 SHANK3Q9BYB0 1731 aa13.48□□□□□ -0.25
FNDC1-201ENST00000297267 PPYP01298 95 aa13.48□□□□□ -0.25
FNDC1-201ENST00000297267 OR52M1Q8NGK5 317 aa13.48□□□□□ -0.25
FNDC1-201ENST00000297267 GLRX2Q9NS18 164 aa13.48□□□□□ -0.25
FNDC1-201ENST00000297267 H3BQ15 152 aa13.47□□□□□ -0.25
FNDC1-201ENST00000297267 ADRA2AP08913 450 aa13.47□□□□□ -0.25
FNDC1-201ENST00000297267 FAM3BP58499 235 aaPredicted RBP13.47□□□□□ -0.25
FNDC1-201ENST00000297267 GTF2H5Q6ZYL4 71 aa13.47□□□□□ -0.25
FNDC1-201ENST00000297267 SLC26A10Q8NG04 563 aa13.47□□□□□ -0.25
FNDC1-201ENST00000297267 OR8G5Q8NG78 346 aa13.47□□□□□ -0.25
FNDC1-201ENST00000297267 RPS4Y2Q8TD47 263 aa13.47□□□□□ -0.25
FNDC1-201ENST00000297267 DTD1Q8TEA8 209 aa13.47□□□□□ -0.25
FNDC1-201ENST00000297267 PIK3IP1Q96FE7 263 aa13.47□□□□□ -0.25
FNDC1-201ENST00000297267 RGS13O14921 159 aa13.47□□□□□ -0.25
FNDC1-201ENST00000297267 MOSPD3O75425 235 aa13.47□□□□□ -0.25
FNDC1-201ENST00000297267 ATOH7Q8N100 152 aa13.47□□□□□ -0.25
FNDC1-201ENST00000297267 CASP8AP2Q9UKL3 1982 aa13.47□□□□□ -0.25
FNDC1-201ENST00000297267 MS4A18H0YCH9 400 aa13.47□□□□□ -0.25
FNDC1-201ENST00000297267 FOXS1O43638 330 aa13.47□□□□□ -0.25
FNDC1-201ENST00000297267 RNASE1P07998 156 aaKnown RBP13.47□□□□□ -0.25
FNDC1-201ENST00000297267 PPOXP50336 477 aa13.47□□□□□ -0.25
FNDC1-201ENST00000297267 GZMMP51124 257 aa13.47□□□□□ -0.25
FNDC1-201ENST00000297267 MS4A18Q3C1V0 323 aa13.47□□□□□ -0.25
FNDC1-201ENST00000297267 UBR3Q6ZT12 1888 aa13.47□□□□□ -0.25
FNDC1-201ENST00000297267 A0A087X0M5 115 aa13.47□□□□□ -0.25
FNDC1-201ENST00000297267 A0A1B0GX30 115 aa13.47□□□□□ -0.25
FNDC1-201ENST00000297267 HSPB2A8KAH6 182 aa13.47□□□□□ -0.25
FNDC1-201ENST00000297267 FUT5Q11128 374 aa13.47□□□□□ -0.25
FNDC1-201ENST00000297267 HSPB2Q16082 182 aa13.47□□□□□ -0.25
FNDC1-201ENST00000297267 RNF212Q495C1 297 aa13.47□□□□□ -0.25
FNDC1-201ENST00000297267 TMUB1Q9BVT8 246 aa13.47□□□□□ -0.25
FNDC1-201ENST00000297267 IGHV3-35A0A0C4DH35 117 aa13.46□□□□□ -0.25
FNDC1-201ENST00000297267 IQCJQ1A5X6 159 aa13.46□□□□□ -0.25
FNDC1-201ENST00000297267 OR6X1Q8NH79 312 aa13.46□□□□□ -0.25
FNDC1-201ENST00000297267 LILRB1Q8NHL6 650 aaPredicted RBP13.46□□□□□ -0.25
FNDC1-201ENST00000297267 SH2D2AQ9NP31 389 aa13.46□□□□□ -0.25
FNDC1-201ENST00000297267 TGIF2-C20orf24A0A0A6YYL0 155 aa13.46□□□□□ -0.25
FNDC1-201ENST00000297267 CXorf65A6NEN9 183 aa13.46□□□□□ -0.25
FNDC1-201ENST00000297267 RAB29O14966 203 aa13.46□□□□□ -0.25
FNDC1-201ENST00000297267 HRASP01112 189 aa13.46□□□□□ -0.25
FNDC1-201ENST00000297267 TNFRSF1AP19438 455 aa13.46□□□□□ -0.25
FNDC1-201ENST00000297267 EIF3IQ13347 325 aaKnown RBP13.46□□□□□ -0.25
FNDC1-201ENST00000297267 TWIST1Q15672 202 aa13.46□□□□□ -0.25
FNDC1-201ENST00000297267 NUFIP2Q7Z417 695 aaKnown RBP13.46□□□□□ -0.25
FNDC1-201ENST00000297267 CADM4Q8NFZ8 388 aa13.46□□□□□ -0.25
FNDC1-201ENST00000297267 CKAP5Q14008 2032 aa13.46□□□□□ -0.25
FNDC1-201ENST00000297267 MEOX2P50222 304 aa13.46□□□□□ -0.25
FNDC1-201ENST00000297267 GFRA1P56159 465 aa13.46□□□□□ -0.25
FNDC1-201ENST00000297267 FAM209AQ5JX71 171 aa13.46□□□□□ -0.25
FNDC1-201ENST00000297267 TTTY12Q9BZ98 90 aa13.46□□□□□ -0.25
FNDC1-201ENST00000297267 OOEPA6NGQ2 149 aa13.46□□□□□ -0.26
FNDC1-201ENST00000297267 HMGA2P52926 109 aa13.46□□□□□ -0.26
FNDC1-201ENST00000297267 DHRS11Q6UWP2 260 aa13.46□□□□□ -0.26
FNDC1-201ENST00000297267 MRPL37Q9BZE1 423 aaKnown RBP13.46□□□□□ -0.26
FNDC1-201ENST00000297267 WDR61Q9GZS3 305 aaKnown RBP13.46□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms