RNA–Protein interactions for RNA: ENST00000297071.8

TRA2A-201, Transcript of transformer 2 alpha homolog, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRA2A, Length 1,845 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-201ENST00000297071 PINX1Q96BK5 328 aaKnown RBP16.44■□□□□ 0.22
TRA2A-201ENST00000297071 IMMP1LQ96LU5 166 aa16.44■□□□□ 0.22
TRA2A-201ENST00000297071 SRXN1Q9BYN0 137 aa16.44■□□□□ 0.22
TRA2A-201ENST00000297071 MAGT1Q9H0U3 335 aa16.44■□□□□ 0.22
TRA2A-201ENST00000297071 VAX2Q9UIW0 290 aa16.44■□□□□ 0.22
TRA2A-201ENST00000297071 ZNF716A6NP11 495 aa16.43■□□□□ 0.22
TRA2A-201ENST00000297071 KLK3P07288 261 aaPredicted RBP16.43■□□□□ 0.22
TRA2A-201ENST00000297071 F2RP25116 425 aa16.43■□□□□ 0.22
TRA2A-201ENST00000297071 RUNX1Q01196 453 aa16.43■□□□□ 0.22
TRA2A-201ENST00000297071 ZFP36L1Q07352 338 aaKnown RBP16.43■□□□□ 0.22
TRA2A-201ENST00000297071 ABLIM2Q6H8Q1 611 aa16.43■□□□□ 0.22
TRA2A-201ENST00000297071 CENPVQ7Z7K6 275 aaPredicted RBP16.43■□□□□ 0.22
TRA2A-201ENST00000297071 TGIF2LYQ8IUE0 185 aa16.43■□□□□ 0.22
TRA2A-201ENST00000297071 FOXB1Q99853 325 aa16.43■□□□□ 0.22
TRA2A-201ENST00000297071 PLK3Q9H4B4 646 aa16.43■□□□□ 0.22
TRA2A-201ENST00000297071 SRD5A3Q9H8P0 318 aa16.43■□□□□ 0.22
TRA2A-201ENST00000297071 CRLF2Q9HC73 371 aa16.43■□□□□ 0.22
TRA2A-201ENST00000297071 P4HTMQ9NXG6 502 aa16.43■□□□□ 0.22
TRA2A-201ENST00000297071 RTTNQ86VV8 2226 aa16.43■□□□□ 0.22
TRA2A-201ENST00000297071 PGLYRP1O75594 196 aaPredicted RBP16.42■□□□□ 0.22
TRA2A-201ENST00000297071 SSR4P51571 173 aa16.42■□□□□ 0.22
TRA2A-201ENST00000297071 SLC25A26Q70HW3 274 aa16.42■□□□□ 0.22
TRA2A-201ENST00000297071 CALHM1Q8IU99 346 aa16.42■□□□□ 0.22
TRA2A-201ENST00000297071 SCGB1C1Q8TD33 95 aa16.42■□□□□ 0.22
TRA2A-201ENST00000297071 ZNF845Q96IR2 970 aaPredicted RBP16.42■□□□□ 0.22
TRA2A-201ENST00000297071 SMOC1Q9H4F8 434 aa16.42■□□□□ 0.22
TRA2A-201ENST00000297071 IGHV1-45A0A0A0MS14 117 aa16.42■□□□□ 0.22
TRA2A-201ENST00000297071 NPIPB11E5RHQ5 1161 aa16.42■□□□□ 0.22
TRA2A-201ENST00000297071 TNFSF11O14788 317 aa16.42■□□□□ 0.22
TRA2A-201ENST00000297071 CCL3P10147 92 aa16.42■□□□□ 0.22
TRA2A-201ENST00000297071 FOSL1P15407 271 aa16.42■□□□□ 0.22
TRA2A-201ENST00000297071 DDTP30046 118 aa16.42■□□□□ 0.22
TRA2A-201ENST00000297071 SRD5A2P31213 254 aa16.42■□□□□ 0.22
TRA2A-201ENST00000297071 B3GALT5-AS1P59052 145 aa16.42■□□□□ 0.22
TRA2A-201ENST00000297071 HERPUD1Q15011 391 aa16.42■□□□□ 0.22
TRA2A-201ENST00000297071 RSPO4Q2I0M5 234 aaPredicted RBP16.42■□□□□ 0.22
TRA2A-201ENST00000297071 ZNF787Q6DD87 383 aa16.42■□□□□ 0.22
TRA2A-201ENST00000297071 ZNF880Q6PDB4 577 aa16.42■□□□□ 0.22
TRA2A-201ENST00000297071 AAED1Q7RTV5 226 aa16.42■□□□□ 0.22
TRA2A-201ENST00000297071 THNSL2Q86YJ6 484 aa16.42■□□□□ 0.22
TRA2A-201ENST00000297071 JSRP1Q96MG2 331 aaPredicted RBP16.42■□□□□ 0.22
TRA2A-201ENST00000297071 DUSP23Q9BVJ7 150 aa16.42■□□□□ 0.22
TRA2A-201ENST00000297071 STRADBQ9C0K7 418 aa16.42■□□□□ 0.22
TRA2A-201ENST00000297071 URGCP-MRPS24S4R325 110 aa16.42■□□□□ 0.22
TRA2A-201ENST00000297071 ASCC3Q8N3C0 2202 aaKnown RBP16.41■□□□□ 0.22
TRA2A-201ENST00000297071 IGKV1D-13A0A0B4J2D9 117 aa16.41■□□□□ 0.22
TRA2A-201ENST00000297071 CNOT4O95628 575 aaKnown RBP16.41■□□□□ 0.22
TRA2A-201ENST00000297071 MMP7P09237 267 aaPredicted RBP16.41■□□□□ 0.22
TRA2A-201ENST00000297071 IGKV1-13P0DP09 117 aa16.41■□□□□ 0.22
TRA2A-201ENST00000297071 FGF5P12034 268 aa16.41■□□□□ 0.22
TRA2A-201ENST00000297071 EDN3P14138 238 aa16.41■□□□□ 0.22
TRA2A-201ENST00000297071 RAB11AP62491 216 aa16.41■□□□□ 0.22
TRA2A-201ENST00000297071 JOSD1Q15040 202 aaPredicted RBP16.41■□□□□ 0.22
TRA2A-201ENST00000297071 TMEM183AQ8IXX5 376 aa16.41■□□□□ 0.22
TRA2A-201ENST00000297071 ZNF295-AS1Q8N0V1 137 aa16.41■□□□□ 0.22
TRA2A-201ENST00000297071 GPR146Q96CH1 333 aa16.41■□□□□ 0.22
TRA2A-201ENST00000297071 CDX2Q99626 313 aaPredicted RBP16.41■□□□□ 0.22
TRA2A-201ENST00000297071 RPRMQ9NS64 109 aa16.41■□□□□ 0.22
TRA2A-201ENST00000297071 MRPS18CQ9Y3D5 142 aaKnown RBP16.41■□□□□ 0.22
TRA2A-201ENST00000297071 TIMM9Q9Y5J7 89 aa16.41■□□□□ 0.22
TRA2A-201ENST00000297071 IGHV5-10-1A0A0J9YXX1 117 aa16.4■□□□□ 0.22
TRA2A-201ENST00000297071 SMCO3A2RU48 225 aa16.4■□□□□ 0.22
TRA2A-201ENST00000297071 SCTP09683 121 aa16.4■□□□□ 0.22
TRA2A-201ENST00000297071 MYF5P13349 255 aa16.4■□□□□ 0.22
TRA2A-201ENST00000297071 CEBPGP53567 150 aa16.4■□□□□ 0.22
TRA2A-201ENST00000297071 CDPF1Q6NVV7 123 aa16.4■□□□□ 0.22
TRA2A-201ENST00000297071 MKXQ8IYA7 352 aa16.4■□□□□ 0.22
TRA2A-201ENST00000297071 TMEM217Q8N7C4 229 aa16.4■□□□□ 0.22
TRA2A-201ENST00000297071 RNASE11Q8TAA1 199 aaKnown RBP16.4■□□□□ 0.22
TRA2A-201ENST00000297071 CABLES2Q9BTV7 478 aa16.4■□□□□ 0.22
TRA2A-201ENST00000297071 ACTR3CQ9C0K3 210 aaPredicted RBP16.4■□□□□ 0.22
TRA2A-201ENST00000297071 CCL28Q9NRJ3 127 aa16.4■□□□□ 0.22
TRA2A-201ENST00000297071 GNG13Q9P2W3 67 aa16.4■□□□□ 0.22
TRA2A-201ENST00000297071 C9J4A7 227 aa16.4■□□□□ 0.22
TRA2A-201ENST00000297071 COX5BP10606 129 aa16.4■□□□□ 0.22
TRA2A-201ENST00000297071 GAMTQ14353 236 aa16.4■□□□□ 0.22
TRA2A-201ENST00000297071 LRRC75BQ2VPJ9 315 aa16.4■□□□□ 0.22
TRA2A-201ENST00000297071 PCSK4Q6UW60 755 aa16.4■□□□□ 0.22
TRA2A-201ENST00000297071 ZNF525Q8N782 197 aa16.4■□□□□ 0.22
TRA2A-201ENST00000297071 OR10A7Q8NGE5 316 aa16.4■□□□□ 0.22
TRA2A-201ENST00000297071 TMEM45BQ96B21 275 aa16.4■□□□□ 0.22
TRA2A-201ENST00000297071 S100PBPQ96BU1 408 aa16.4■□□□□ 0.22
TRA2A-201ENST00000297071 NOL4LQ96MY1 436 aaPredicted RBP16.4■□□□□ 0.22
TRA2A-201ENST00000297071 HIST1H2BLQ99880 126 aa16.4■□□□□ 0.22
TRA2A-201ENST00000297071 REPIN1Q9BWE0 567 aaKnown RBP16.4■□□□□ 0.22
TRA2A-201ENST00000297071 GPR35Q9HC97 309 aa16.4■□□□□ 0.22
TRA2A-201ENST00000297071 NAT8Q9UHE5 227 aa16.4■□□□□ 0.22
TRA2A-201ENST00000297071 HBG1P69891 147 aa16.39■□□□□ 0.21
TRA2A-201ENST00000297071 HBG2P69892 147 aa16.39■□□□□ 0.21
TRA2A-201ENST00000297071 TMEM41BQ5BJD5 291 aa16.39■□□□□ 0.21
TRA2A-201ENST00000297071 CYP2G1PQ6ZSU1 146 aa16.39■□□□□ 0.21
TRA2A-201ENST00000297071 SSX9Q7RTT3 188 aa16.39■□□□□ 0.21
TRA2A-201ENST00000297071 PACRGQ96M98 296 aaPredicted RBP16.39■□□□□ 0.21
TRA2A-201ENST00000297071 C2orf88Q9BSF0 95 aa16.39■□□□□ 0.21
TRA2A-201ENST00000297071 OR2W1Q9Y3N9 320 aa16.39■□□□□ 0.21
TRA2A-201ENST00000297071 IGKV1-6A0A0C4DH72 117 aa16.38■□□□□ 0.21
TRA2A-201ENST00000297071 FAM90A26D6RGX4 464 aa16.38■□□□□ 0.21
TRA2A-201ENST00000297071 COX6A1P12074 109 aa16.38■□□□□ 0.21
TRA2A-201ENST00000297071 B4GALT1P15291 398 aa16.38■□□□□ 0.21
TRA2A-201ENST00000297071 BCL3P20749 454 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms