RNA–Protein interactions for RNA: ENST00000288344.14

HMGN1-201, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 1,303 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-201ENST00000288344 A0A1W2PRF3 423 aa7.39□□□□□ -1.23
HMGN1-201ENST00000288344 A0A1W2PRM7 423 aa7.39□□□□□ -1.23
HMGN1-201ENST00000288344 MEIOCA2RUB1 952 aa7.39□□□□□ -1.23
HMGN1-201ENST00000288344 ZNF729A6NN14 1252 aaPredicted RBP7.39□□□□□ -1.23
HMGN1-201ENST00000288344 NDUFA7O95182 113 aa7.39□□□□□ -1.23
HMGN1-201ENST00000288344 OCMP0CE72 109 aaPredicted RBP7.39□□□□□ -1.23
HMGN1-201ENST00000288344 HSMCR30P0CW71 290 aa7.39□□□□□ -1.23
HMGN1-201ENST00000288344 MGMTP16455 207 aa7.39□□□□□ -1.23
HMGN1-201ENST00000288344 SERPINA2P20848 420 aa7.39□□□□□ -1.23
HMGN1-201ENST00000288344 HTR2CP28335 458 aa7.39□□□□□ -1.23
HMGN1-201ENST00000288344 DYNLT3P51808 116 aa7.39□□□□□ -1.23
HMGN1-201ENST00000288344 RPL15P61313 204 aaKnown RBP7.39□□□□□ -1.23
HMGN1-201ENST00000288344 SCN1BQ07699 218 aa7.39□□□□□ -1.23
HMGN1-201ENST00000288344 KCTD21Q4G0X4 260 aa7.39□□□□□ -1.23
HMGN1-201ENST00000288344 AWAT1Q58HT5 328 aa7.39□□□□□ -1.23
HMGN1-201ENST00000288344 OR10K2Q6IF99 312 aa7.39□□□□□ -1.23
HMGN1-201ENST00000288344 ZNF773Q6PK81 442 aa7.39□□□□□ -1.23
HMGN1-201ENST00000288344 RBMS3Q6XE24 437 aaKnown RBP7.39□□□□□ -1.23
HMGN1-201ENST00000288344 CLUHP3Q96NS8 147 aa7.39□□□□□ -1.23
HMGN1-201ENST00000288344 LPAR5Q9H1C0 372 aa7.39□□□□□ -1.23
HMGN1-201ENST00000288344 BANF2Q9H503 90 aa7.39□□□□□ -1.23
HMGN1-201ENST00000288344 ZNF286AQ9HBT8 521 aa7.39□□□□□ -1.23
HMGN1-201ENST00000288344 MBNL3Q9NUK0 354 aaKnown RBP7.39□□□□□ -1.23
HMGN1-201ENST00000288344 KIF25Q9UIL4 384 aa7.39□□□□□ -1.23
HMGN1-201ENST00000288344 TBL2Q9Y4P3 447 aaKnown RBP7.39□□□□□ -1.23
HMGN1-201ENST00000288344 U3KQE9 123 aa7.39□□□□□ -1.23
HMGN1-201ENST00000288344 hCG_1809904A0A1W2PP81 198 aa7.38□□□□□ -1.23
HMGN1-201ENST00000288344 A0A1W2PPE2 198 aa7.38□□□□□ -1.23
HMGN1-201ENST00000288344 A0A1W2PR64 198 aa7.38□□□□□ -1.23
HMGN1-201ENST00000288344 A0A1W2PRV1 198 aa7.38□□□□□ -1.23
HMGN1-201ENST00000288344 FUOMA2VDF0 154 aa7.38□□□□□ -1.23
HMGN1-201ENST00000288344 SLC17A2O00624 439 aa7.38□□□□□ -1.23
HMGN1-201ENST00000288344 GPR137BO60478 399 aa7.38□□□□□ -1.23
HMGN1-201ENST00000288344 TSPAN9O75954 239 aa7.38□□□□□ -1.23
HMGN1-201ENST00000288344 CLPXO76031 633 aa7.38□□□□□ -1.23
HMGN1-201ENST00000288344 OR7C1O76099 320 aaPredicted RBP7.38□□□□□ -1.23
HMGN1-201ENST00000288344 FBP1P09467 338 aa7.38□□□□□ -1.23
HMGN1-201ENST00000288344 JUNBP17275 347 aaPredicted RBP7.38□□□□□ -1.23
HMGN1-201ENST00000288344 GZMHP20718 246 aa7.38□□□□□ -1.23
HMGN1-201ENST00000288344 EEF1B2P24534 225 aaKnown RBP7.38□□□□□ -1.23
HMGN1-201ENST00000288344 CDK2P24941 298 aa7.38□□□□□ -1.23
HMGN1-201ENST00000288344 CHATP28329 748 aa7.38□□□□□ -1.23
HMGN1-201ENST00000288344 KRTAP10-3P60369 221 aa7.38□□□□□ -1.23
HMGN1-201ENST00000288344 RPS27AP62979 156 aaKnown RBP7.38□□□□□ -1.23
HMGN1-201ENST00000288344 PLA2G7Q13093 441 aa7.38□□□□□ -1.23
HMGN1-201ENST00000288344 ATXN7L3Q14CW9 347 aaPredicted RBP7.38□□□□□ -1.23
HMGN1-201ENST00000288344 FBLN7Q53RD9 439 aa7.38□□□□□ -1.23
HMGN1-201ENST00000288344 PAN3Q58A45 887 aaKnown RBP7.38□□□□□ -1.23
HMGN1-201ENST00000288344 MINOS1Q5TGZ0 78 aa7.38□□□□□ -1.23
HMGN1-201ENST00000288344 FAM53AQ6NSI3 398 aaPredicted RBP7.38□□□□□ -1.23
HMGN1-201ENST00000288344 ZNF880Q6PDB4 577 aa7.38□□□□□ -1.23
HMGN1-201ENST00000288344 RTN4RL2Q86UN3 420 aa7.38□□□□□ -1.23
HMGN1-201ENST00000288344 JAGN1Q8N5M9 183 aa7.38□□□□□ -1.23
HMGN1-201ENST00000288344 ZNF565Q8N9K5 539 aa7.38□□□□□ -1.23
HMGN1-201ENST00000288344 OR10A7Q8NGE5 316 aa7.38□□□□□ -1.23
HMGN1-201ENST00000288344 BARHL1Q9BZE3 327 aa7.38□□□□□ -1.23
HMGN1-201ENST00000288344 FAM192AQ9GZU8 254 aa7.38□□□□□ -1.23
HMGN1-201ENST00000288344 KCNK15Q9H427 330 aa7.38□□□□□ -1.23
HMGN1-201ENST00000288344 C16orf95Q9H693 158 aa7.38□□□□□ -1.23
HMGN1-201ENST00000288344 TCF7L1Q9HCS4 588 aa7.38□□□□□ -1.23
HMGN1-201ENST00000288344 PCDHB16Q9NRJ7 776 aa7.38□□□□□ -1.23
HMGN1-201ENST00000288344 GFOD1Q9NXC2 390 aa7.38□□□□□ -1.23
HMGN1-201ENST00000288344 OR6C3Q9NZP0 311 aa7.38□□□□□ -1.23
HMGN1-201ENST00000288344 AK6Q9Y3D8 172 aaKnown RBP7.38□□□□□ -1.23
HMGN1-201ENST00000288344 MINOS1-NBL1R4GNA1 71 aa7.38□□□□□ -1.23
HMGN1-201ENST00000288344 WNK1Q9H4A3 2382 aa7.38□□□□□ -1.23
HMGN1-201ENST00000288344 TRGV10A0A0A0MS01 117 aa7.37□□□□□ -1.23
HMGN1-201ENST00000288344 TRAV39A0A0B4J263 110 aa7.37□□□□□ -1.23
HMGN1-201ENST00000288344 FAM90A9PA6NNJ1 464 aa7.37□□□□□ -1.23
HMGN1-201ENST00000288344 F2RL2O00254 374 aa7.37□□□□□ -1.23
HMGN1-201ENST00000288344 CCRL2O00421 344 aa7.37□□□□□ -1.23
HMGN1-201ENST00000288344 ORC5O43913 435 aa7.37□□□□□ -1.23
HMGN1-201ENST00000288344 ARL6IP5O75915 188 aa7.37□□□□□ -1.23
HMGN1-201ENST00000288344 NAPSAO96009 420 aa7.37□□□□□ -1.23
HMGN1-201ENST00000288344 IL1AP01583 271 aa7.37□□□□□ -1.23
HMGN1-201ENST00000288344 CSTBP04080 98 aaKnown RBP7.37□□□□□ -1.23
HMGN1-201ENST00000288344 H2AFB1P0C5Y9 115 aa7.37□□□□□ -1.23
HMGN1-201ENST00000288344 H2AFB2P0C5Z0 115 aa7.37□□□□□ -1.23
HMGN1-201ENST00000288344 UBBP0CG47 229 aa7.37□□□□□ -1.23
HMGN1-201ENST00000288344 FUT3P21217 361 aa7.37□□□□□ -1.23
HMGN1-201ENST00000288344 OMGP23515 440 aa7.37□□□□□ -1.23
HMGN1-201ENST00000288344 COX7A1P24310 79 aa7.37□□□□□ -1.23
HMGN1-201ENST00000288344 CALRP27797 417 aaKnown RBP7.37□□□□□ -1.23
HMGN1-201ENST00000288344 C2orf76Q3KRA6 126 aa7.37□□□□□ -1.23
HMGN1-201ENST00000288344 PRAMEF5Q5TYX0 476 aa7.37□□□□□ -1.23
HMGN1-201ENST00000288344 GLT8D1Q68CQ7 371 aa7.37□□□□□ -1.23
HMGN1-201ENST00000288344 AWAT2Q6E213 333 aa7.37□□□□□ -1.23
HMGN1-201ENST00000288344 SLC16A12Q6ZSM3 486 aa7.37□□□□□ -1.23
HMGN1-201ENST00000288344 Q6ZSV7 163 aa7.37□□□□□ -1.23
HMGN1-201ENST00000288344 C5orf24Q7Z6I8 188 aa7.37□□□□□ -1.23
HMGN1-201ENST00000288344 ABHD12Q8N2K0 398 aa7.37□□□□□ -1.23
HMGN1-201ENST00000288344 OR52M1Q8NGK5 317 aa7.37□□□□□ -1.23
HMGN1-201ENST00000288344 OR6M1Q8NGM8 313 aa7.37□□□□□ -1.23
HMGN1-201ENST00000288344 OR13D1Q8NGV5 346 aa7.37□□□□□ -1.23
HMGN1-201ENST00000288344 ST6GALNAC6Q969X2 333 aa7.37□□□□□ -1.23
HMGN1-201ENST00000288344 SSX3Q99909 188 aa7.37□□□□□ -1.23
HMGN1-201ENST00000288344 NICN1Q9BSH3 213 aa7.37□□□□□ -1.23
HMGN1-201ENST00000288344 ZNF747Q9BV97 191 aa7.37□□□□□ -1.23
HMGN1-201ENST00000288344 CLEC7AQ9BXN2 247 aa7.37□□□□□ -1.23
HMGN1-201ENST00000288344 SELENOIQ9C0D9 397 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms