RNA–Protein interactions for RNA: ENST00000277549.9

CACNA1B-201, Transcript of calcium voltage-gated channel subunit alpha1 B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1B, Length 7,158 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1B-201ENST00000277549 BVESQ8NE79 360 aa17.81■□□□□ 0.44
CACNA1B-201ENST00000277549 KCNK17Q96T54 332 aa17.81■□□□□ 0.44
CACNA1B-201ENST00000277549 NUP98P52948 1817 aa17.81■□□□□ 0.44
CACNA1B-201ENST00000277549 TOGARAM1Q9Y4F4 1720 aa17.81■□□□□ 0.44
CACNA1B-201ENST00000277549 HMX2A2RU54 273 aa17.81■□□□□ 0.44
CACNA1B-201ENST00000277549 SNRPGP15A8MWD9 76 aa17.81■□□□□ 0.44
CACNA1B-201ENST00000277549 SYT8Q8NBV8 401 aa17.81■□□□□ 0.44
CACNA1B-201ENST00000277549 BET1LQ9NYM9 111 aa17.81■□□□□ 0.44
CACNA1B-201ENST00000277549 IGHV3-49A0A0A0MS15 119 aa17.81■□□□□ 0.44
CACNA1B-201ENST00000277549 ZNF815PA8K554 130 aa17.81■□□□□ 0.44
CACNA1B-201ENST00000277549 ERVFRD-1P60508 538 aa17.81■□□□□ 0.44
CACNA1B-201ENST00000277549 RAC3P60763 192 aa17.81■□□□□ 0.44
CACNA1B-201ENST00000277549 OR2W3Q7Z3T1 314 aa17.81■□□□□ 0.44
CACNA1B-201ENST00000277549 C12orf57Q99622 126 aa17.81■□□□□ 0.44
CACNA1B-201ENST00000277549 UNQ9370/PRO34162Q6UXP9 181 aa17.8■□□□□ 0.44
CACNA1B-201ENST00000277549 CTAG2O75638 210 aa17.8■□□□□ 0.44
CACNA1B-201ENST00000277549 MUC20Q8N307 709 aaPredicted RBP17.8■□□□□ 0.44
CACNA1B-201ENST00000277549 ITLN2Q8WWU7 325 aaPredicted RBP17.8■□□□□ 0.44
CACNA1B-201ENST00000277549 MS4A3Q96HJ5 214 aa17.8■□□□□ 0.44
CACNA1B-201ENST00000277549 C21orf140B9A014 251 aa17.8■□□□□ 0.44
CACNA1B-201ENST00000277549 AANATQ16613 207 aa17.8■□□□□ 0.44
CACNA1B-201ENST00000277549 ATP6V1FQ16864 119 aa17.8■□□□□ 0.44
CACNA1B-201ENST00000277549 RHBDD2Q6NTF9 364 aa17.8■□□□□ 0.44
CACNA1B-201ENST00000277549 ZNF707Q96C28 371 aaPredicted RBP17.8■□□□□ 0.44
CACNA1B-201ENST00000277549 hCG_38984A0A1B0GV85 526 aa17.8■□□□□ 0.44
CACNA1B-201ENST00000277549 NOVP48745 357 aa17.8■□□□□ 0.44
CACNA1B-201ENST00000277549 ANXA10Q9UJ72 324 aa17.8■□□□□ 0.44
CACNA1B-201ENST00000277549 SELENOKQ9Y6D0 94 aa17.8■□□□□ 0.44
CACNA1B-201ENST00000277549 MGAT2Q10469 447 aa17.79■□□□□ 0.44
CACNA1B-201ENST00000277549 WDR25Q64LD2 544 aaPredicted RBP17.79■□□□□ 0.44
CACNA1B-201ENST00000277549 SEC11CQ9BY50 192 aa17.79■□□□□ 0.44
CACNA1B-201ENST00000277549 GSX2Q9BZM3 304 aa17.79■□□□□ 0.44
CACNA1B-201ENST00000277549 MPC1Q9Y5U8 109 aa17.79■□□□□ 0.44
CACNA1B-201ENST00000277549 IER3P46695 156 aa17.79■□□□□ 0.44
CACNA1B-201ENST00000277549 TEX30Q5JUR7 227 aa17.79■□□□□ 0.44
CACNA1B-201ENST00000277549 OR2C3Q8N628 320 aa17.79■□□□□ 0.44
CACNA1B-201ENST00000277549 C11orf44Q8N8P7 122 aa17.79■□□□□ 0.44
CACNA1B-201ENST00000277549 DDX60Q8IY21 1712 aaKnown RBP17.79■□□□□ 0.44
CACNA1B-201ENST00000277549 MPDU1O75352 247 aa17.79■□□□□ 0.44
CACNA1B-201ENST00000277549 PGA3P0DJD8 388 aa17.79■□□□□ 0.44
CACNA1B-201ENST00000277549 HLA-DRB5Q30154 266 aa17.79■□□□□ 0.44
CACNA1B-201ENST00000277549 KHDC3LQ587J8 217 aa17.79■□□□□ 0.44
CACNA1B-201ENST00000277549 MEIG1Q5JSS6 88 aa17.79■□□□□ 0.44
CACNA1B-201ENST00000277549 ABHD14BQ96IU4 210 aa17.79■□□□□ 0.44
CACNA1B-201ENST00000277549 ANKRD36CQ5JPF3 1778 aa17.79■□□□□ 0.44
CACNA1B-201ENST00000277549 J3QR06 171 aa17.79■□□□□ 0.44
CACNA1B-201ENST00000277549 JUNBP17275 347 aaPredicted RBP17.79■□□□□ 0.44
CACNA1B-201ENST00000277549 IL11P20809 199 aa17.79■□□□□ 0.44
CACNA1B-201ENST00000277549 TMEM255AQ5JRV8 349 aa17.79■□□□□ 0.44
CACNA1B-201ENST00000277549 KLF7O75840 302 aaPredicted RBP17.79■□□□□ 0.44
CACNA1B-201ENST00000277549 NKX2-2O95096 273 aa17.79■□□□□ 0.44
CACNA1B-201ENST00000277549 ZNF826PQ6ZT77 177 aa17.79■□□□□ 0.44
CACNA1B-201ENST00000277549 WIPI2Q9Y4P8 454 aa17.79■□□□□ 0.44
CACNA1B-201ENST00000277549 SLX4Q8IY92 1834 aa17.79■□□□□ 0.44
CACNA1B-201ENST00000277549 PTBP1P26599 531 aaKnown RBP eCLIP17.79■□□□□ 0.44
CACNA1B-201ENST00000277549 SUCLG1P53597 346 aaKnown RBP17.79■□□□□ 0.44
CACNA1B-201ENST00000277549 UCNP55089 124 aa17.79■□□□□ 0.44
CACNA1B-201ENST00000277549 NEU1Q99519 415 aa17.79■□□□□ 0.44
CACNA1B-201ENST00000277549 PRSS50Q9UI38 385 aa17.79■□□□□ 0.44
CACNA1B-201ENST00000277549 ZFPL1O95159 310 aa17.78■□□□□ 0.44
CACNA1B-201ENST00000277549 LCN2P80188 198 aa17.78■□□□□ 0.44
CACNA1B-201ENST00000277549 SHROOM3Q8TF72 1996 aa17.78■□□□□ 0.44
CACNA1B-201ENST00000277549 TRAV1-2A0A0B4J238 106 aa17.78■□□□□ 0.44
CACNA1B-201ENST00000277549 SYNGR1O43759 233 aa17.78■□□□□ 0.44
CACNA1B-201ENST00000277549 PAGE4O60829 102 aa17.78■□□□□ 0.44
CACNA1B-201ENST00000277549 PRDX2P32119 198 aa17.78■□□□□ 0.44
CACNA1B-201ENST00000277549 MAS1LP35410 378 aa17.78■□□□□ 0.44
CACNA1B-201ENST00000277549 TMEM78Q5T7P6 136 aa17.78■□□□□ 0.44
CACNA1B-201ENST00000277549 LINC01465Q8N7H1 131 aa17.78■□□□□ 0.44
CACNA1B-201ENST00000277549 TOLLIPQ9H0E2 274 aa17.78■□□□□ 0.44
CACNA1B-201ENST00000277549 RAXQ9Y2V3 346 aa17.78■□□□□ 0.44
CACNA1B-201ENST00000277549 APCSP02743 223 aa17.78■□□□□ 0.44
CACNA1B-201ENST00000277549 GAB4Q2WGN9 574 aa17.78■□□□□ 0.44
CACNA1B-201ENST00000277549 TMEM183BQ1AE95 376 aa17.78■□□□□ 0.44
CACNA1B-201ENST00000277549 OR6X1Q8NH79 312 aa17.78■□□□□ 0.44
CACNA1B-201ENST00000277549 OR4A5Q8NH83 315 aa17.78■□□□□ 0.44
CACNA1B-201ENST00000277549 ADTRPQ96IZ2 230 aa17.78■□□□□ 0.44
CACNA1B-201ENST00000277549 PROB1E7EW31 1015 aa17.78■□□□□ 0.44
CACNA1B-201ENST00000277549 IGHV3-48P01763 117 aa17.78■□□□□ 0.44
CACNA1B-201ENST00000277549 PRB3Q04118 309 aaPredicted RBP17.78■□□□□ 0.44
CACNA1B-201ENST00000277549 ZNF56Q15929 161 aa17.78■□□□□ 0.44
CACNA1B-201ENST00000277549 ITLN1Q8WWA0 313 aa17.78■□□□□ 0.44
CACNA1B-201ENST00000277549 GPA33Q99795 319 aa17.78■□□□□ 0.44
CACNA1B-201ENST00000277549 N4BP2Q86UW6 1770 aaPredicted RBP17.78■□□□□ 0.44
CACNA1B-201ENST00000277549 FCGR2BP31994 310 aaPredicted RBP17.78■□□□□ 0.44
CACNA1B-201ENST00000277549 MRM1Q6IN84 353 aaKnown RBP17.78■□□□□ 0.44
CACNA1B-201ENST00000277549 OR52M1Q8NGK5 317 aa17.78■□□□□ 0.44
CACNA1B-201ENST00000277549 MZB1Q8WU39 189 aa17.78■□□□□ 0.44
CACNA1B-201ENST00000277549 FBXL17Q9UF56 701 aa17.78■□□□□ 0.44
CACNA1B-201ENST00000277549 GMPPAQ96IJ6 420 aaPredicted RBP17.77■□□□□ 0.44
CACNA1B-201ENST00000277549 TCRBV5S1A1TA0A578 114 aa17.77■□□□□ 0.44
CACNA1B-201ENST00000277549 TMEM189A5PLL7 270 aa17.77■□□□□ 0.44
CACNA1B-201ENST00000277549 NUDT3O95989 172 aa17.77■□□□□ 0.44
CACNA1B-201ENST00000277549 ZNF735P0CB33 412 aa17.77■□□□□ 0.44
CACNA1B-201ENST00000277549 TMEM167BQ9NRX6 74 aa17.77■□□□□ 0.44
CACNA1B-201ENST00000277549 BEX4Q9NWD9 120 aaPredicted RBP17.77■□□□□ 0.44
CACNA1B-201ENST00000277549 PIPOXQ9P0Z9 390 aa17.77■□□□□ 0.44
CACNA1B-201ENST00000277549 ZNF253O75346 499 aa17.77■□□□□ 0.44
CACNA1B-201ENST00000277549 DRD3P35462 400 aa17.77■□□□□ 0.44
CACNA1B-201ENST00000277549 ST3GAL2Q16842 350 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms