RNA–Protein interactions for RNA: ENST00000274938.7

SCUBE3-201, Transcript of signal peptide, CUB domain and EGF like domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCUBE3, Length 7,356 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3-201ENST00000274938 ZNF502Q8TBZ5 544 aa7.65□□□□□ -1.18
SCUBE3-201ENST00000274938 ZIC1Q15915 447 aa7.65□□□□□ -1.18
SCUBE3-201ENST00000274938 ZNF79Q15937 498 aa7.65□□□□□ -1.18
SCUBE3-201ENST00000274938 ALG14Q96F25 216 aa7.65□□□□□ -1.18
SCUBE3-201ENST00000274938 DDA1Q9BW61 102 aa7.65□□□□□ -1.18
SCUBE3-201ENST00000274938 METTL12A8MUP2 240 aa7.65□□□□□ -1.19
SCUBE3-201ENST00000274938 FOLR2P14207 255 aa7.65□□□□□ -1.19
SCUBE3-201ENST00000274938 C19orf54Q5BKX5 351 aa7.65□□□□□ -1.19
SCUBE3-201ENST00000274938 VAX1Q5SQQ9 334 aa7.65□□□□□ -1.19
SCUBE3-201ENST00000274938 RTN4RL1Q86UN2 441 aaPredicted RBP7.65□□□□□ -1.19
SCUBE3-201ENST00000274938 CYB561D1Q8N8Q1 229 aa7.65□□□□□ -1.19
SCUBE3-201ENST00000274938 LRRC61Q9BV99 259 aa7.65□□□□□ -1.19
SCUBE3-201ENST00000274938 MFRPQ9BY79 579 aa7.65□□□□□ -1.19
SCUBE3-201ENST00000274938 SHISA8B8ZZ34 492 aa7.65□□□□□ -1.19
SCUBE3-201ENST00000274938 NPIPB6E9PJ23 425 aa7.65□□□□□ -1.19
SCUBE3-201ENST00000274938 SYNGR1O43759 233 aa7.65□□□□□ -1.19
SCUBE3-201ENST00000274938 ZNF735P0CB33 412 aa7.65□□□□□ -1.19
SCUBE3-201ENST00000274938 MAS1LP35410 378 aa7.65□□□□□ -1.19
SCUBE3-201ENST00000274938 ZNF137PP52743 207 aa7.65□□□□□ -1.19
SCUBE3-201ENST00000274938 EMP1P54849 157 aa7.65□□□□□ -1.19
SCUBE3-201ENST00000274938 WFIKKN1Q96NZ8 548 aa7.65□□□□□ -1.19
SCUBE3-201ENST00000274938 HEXA-AS1Q9H8Q6 139 aa7.65□□□□□ -1.19
SCUBE3-201ENST00000274938 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.64□□□□□ -1.19
SCUBE3-201ENST00000274938 MPTX1A8MV57 137 aa7.64□□□□□ -1.19
SCUBE3-201ENST00000274938 RAC3P60763 192 aa7.64□□□□□ -1.19
SCUBE3-201ENST00000274938 ATG4DQ86TL0 474 aaPredicted RBP7.64□□□□□ -1.19
SCUBE3-201ENST00000274938 SPEM1Q8N4L4 309 aa7.64□□□□□ -1.19
SCUBE3-201ENST00000274938 RGP1Q92546 391 aaPredicted RBP7.64□□□□□ -1.19
SCUBE3-201ENST00000274938 TMEM45BQ96B21 275 aa7.64□□□□□ -1.19
SCUBE3-201ENST00000274938 RAB1BQ9H0U4 201 aa7.64□□□□□ -1.19
SCUBE3-201ENST00000274938 LEPROTL1O95214 131 aa7.64□□□□□ -1.19
SCUBE3-201ENST00000274938 PEX11BO96011 259 aa7.64□□□□□ -1.19
SCUBE3-201ENST00000274938 RSPO2Q6UXX9 243 aaPredicted RBP7.64□□□□□ -1.19
SCUBE3-201ENST00000274938 PUSL1Q8N0Z8 303 aaKnown RBP7.64□□□□□ -1.19
SCUBE3-201ENST00000274938 HMGCLL1Q8TB92 370 aa7.64□□□□□ -1.19
SCUBE3-201ENST00000274938 RNF133Q8WVZ7 376 aa7.64□□□□□ -1.19
SCUBE3-201ENST00000274938 ZNF576Q9H609 170 aa7.64□□□□□ -1.19
SCUBE3-201ENST00000274938 PRR13Q9NZ81 148 aa7.64□□□□□ -1.19
SCUBE3-201ENST00000274938 NALCNQ8IZF0 1738 aa7.64□□□□□ -1.19
SCUBE3-201ENST00000274938 PPIHO43447 177 aaKnown RBP7.64□□□□□ -1.19
SCUBE3-201ENST00000274938 HYPMO75409 117 aa7.64□□□□□ -1.19
SCUBE3-201ENST00000274938 TRGC2P03986 189 aa7.64□□□□□ -1.19
SCUBE3-201ENST00000274938 VSIG8P0DPA2 414 aa7.64□□□□□ -1.19
SCUBE3-201ENST00000274938 SRFP11831 508 aa7.64□□□□□ -1.19
SCUBE3-201ENST00000274938 PPP1CCP36873 323 aaKnown RBP7.64□□□□□ -1.19
SCUBE3-201ENST00000274938 NPBWR2P48146 333 aa7.64□□□□□ -1.19
SCUBE3-201ENST00000274938 GUCA2BQ16661 112 aa7.64□□□□□ -1.19
SCUBE3-201ENST00000274938 ADAD2Q8NCV1 583 aaKnown RBP7.64□□□□□ -1.19
SCUBE3-201ENST00000274938 MRGPRFQ96AM1 343 aa7.64□□□□□ -1.19
SCUBE3-201ENST00000274938 NPVFQ9HCQ7 196 aa7.64□□□□□ -1.19
SCUBE3-201ENST00000274938 HLA-DRB1P01911 266 aa7.64□□□□□ -1.19
SCUBE3-201ENST00000274938 SELENOTP62341 195 aa7.64□□□□□ -1.19
SCUBE3-201ENST00000274938 OR8B3Q8NGG8 313 aa7.64□□□□□ -1.19
SCUBE3-201ENST00000274938 ABHD3Q8WU67 409 aa7.64□□□□□ -1.19
SCUBE3-201ENST00000274938 OR8B2Q96RD0 313 aa7.64□□□□□ -1.19
SCUBE3-201ENST00000274938 CHST5Q9GZS9 411 aa7.64□□□□□ -1.19
SCUBE3-201ENST00000274938 HPRT1P00492 218 aa7.64□□□□□ -1.19
SCUBE3-201ENST00000274938 UQCRFS1P47985 274 aa7.64□□□□□ -1.19
SCUBE3-201ENST00000274938 TP53I13Q8NBR0 393 aaPredicted RBP7.64□□□□□ -1.19
SCUBE3-201ENST00000274938 SCNM1Q9BWG6 230 aa7.64□□□□□ -1.19
SCUBE3-201ENST00000274938 ZNF665Q9H7R5 613 aa7.64□□□□□ -1.19
SCUBE3-201ENST00000274938 CLN8Q9UBY8 286 aa7.64□□□□□ -1.19
SCUBE3-201ENST00000274938 TAS2R60P59551 318 aa7.64□□□□□ -1.19
SCUBE3-201ENST00000274938 HYAL1Q12794 435 aa7.64□□□□□ -1.19
SCUBE3-201ENST00000274938 IBA57Q5T440 356 aaKnown RBP7.64□□□□□ -1.19
SCUBE3-201ENST00000274938 SYT8Q8NBV8 401 aa7.64□□□□□ -1.19
SCUBE3-201ENST00000274938 OR4D9Q8NGE8 314 aa7.64□□□□□ -1.19
SCUBE3-201ENST00000274938 LSM10Q969L4 123 aaKnown RBP7.64□□□□□ -1.19
SCUBE3-201ENST00000274938 MS4A3Q96HJ5 214 aa7.64□□□□□ -1.19
SCUBE3-201ENST00000274938 RNF122Q9H9V4 155 aa7.64□□□□□ -1.19
SCUBE3-201ENST00000274938 RNF7Q9UBF6 113 aa7.64□□□□□ -1.19
SCUBE3-201ENST00000274938 PQLC2LA1A4F0 135 aa7.63□□□□□ -1.19
SCUBE3-201ENST00000274938 LIPT2A6NK58 231 aa7.63□□□□□ -1.19
SCUBE3-201ENST00000274938 CCL7P80098 99 aa7.63□□□□□ -1.19
SCUBE3-201ENST00000274938 TMEM196Q5HYL7 178 aa7.63□□□□□ -1.19
SCUBE3-201ENST00000274938 PTPMT1Q8WUK0 201 aaPredicted RBP7.63□□□□□ -1.19
SCUBE3-201ENST00000274938 HIST1H4GQ99525 98 aa7.63□□□□□ -1.19
SCUBE3-201ENST00000274938 VCX2Q9H322 139 aa7.63□□□□□ -1.19
SCUBE3-201ENST00000274938 CISD1Q9NZ45 108 aaKnown RBP7.63□□□□□ -1.19
SCUBE3-201ENST00000274938 NPIPB8E9PQR5 432 aa7.63□□□□□ -1.19
SCUBE3-201ENST00000274938 F2RL2O00254 374 aa7.63□□□□□ -1.19
SCUBE3-201ENST00000274938 RNF224P0DH78 156 aa7.63□□□□□ -1.19
SCUBE3-201ENST00000274938 CXCL2P19875 107 aa7.63□□□□□ -1.19
SCUBE3-201ENST00000274938 ERVFRD-1P60508 538 aa7.63□□□□□ -1.19
SCUBE3-201ENST00000274938 MEF2BQ02080 365 aaPredicted RBP7.63□□□□□ -1.19
SCUBE3-201ENST00000274938 FAM206AQ9NX38 181 aa7.63□□□□□ -1.19
SCUBE3-201ENST00000274938 PEF1Q9UBV8 284 aaKnown RBP7.63□□□□□ -1.19
SCUBE3-201ENST00000274938 CDK2AP1O14519 115 aa7.63□□□□□ -1.19
SCUBE3-201ENST00000274938 RBFOX2O43251 390 aaKnown RBP eCLIP7.63□□□□□ -1.19
SCUBE3-201ENST00000274938 PGFP49763 221 aa7.63□□□□□ -1.19
SCUBE3-201ENST00000274938 CALHM1Q8IU99 346 aa7.63□□□□□ -1.19
SCUBE3-201ENST00000274938 TMEM183AQ8IXX5 376 aa7.63□□□□□ -1.19
SCUBE3-201ENST00000274938 RPS4XP62701 263 aaKnown RBP7.63□□□□□ -1.19
SCUBE3-201ENST00000274938 GGTLC2Q14390 218 aa7.63□□□□□ -1.19
SCUBE3-201ENST00000274938 PSMG4Q5JS54 123 aa7.63□□□□□ -1.19
SCUBE3-201ENST00000274938 ACER2Q5QJU3 275 aa7.63□□□□□ -1.19
SCUBE3-201ENST00000274938 CCL17Q92583 94 aa7.63□□□□□ -1.19
SCUBE3-201ENST00000274938 HARBI1Q96MB7 349 aa7.63□□□□□ -1.19
SCUBE3-201ENST00000274938 GUCD1Q96NT3 240 aa7.63□□□□□ -1.19
SCUBE3-201ENST00000274938 WIPI2Q9Y4P8 454 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms