RNA–Protein interactions for RNA: ENST00000273342.8

COL8A1-202, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 2 BASIC

Gene COL8A1, Length 3,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-202ENST00000273342 SPACA9Q96E40 222 aaPredicted RBP11.09□□□□□ -0.63
COL8A1-202ENST00000273342 HIST1H2AAQ96QV6 131 aa11.09□□□□□ -0.63
COL8A1-202ENST00000273342 SPIN2AQ99865 258 aa11.09□□□□□ -0.63
COL8A1-202ENST00000273342 SPIN2BQ9BPZ2 258 aa11.09□□□□□ -0.63
COL8A1-202ENST00000273342 TAAR3PQ9P1P4 343 aa11.09□□□□□ -0.63
COL8A1-202ENST00000273342 OR14J1Q9UGF5 321 aa11.09□□□□□ -0.63
COL8A1-202ENST00000273342 GPR179Q6PRD1 2367 aa11.09□□□□□ -0.63
COL8A1-202ENST00000273342 CACNA1DQ01668 2161 aa11.09□□□□□ -0.63
COL8A1-202ENST00000273342 SLC22A20A6NK97 555 aa11.09□□□□□ -0.63
COL8A1-202ENST00000273342 HS3ST1O14792 307 aa11.09□□□□□ -0.63
COL8A1-202ENST00000273342 BCL2P10415 239 aa11.09□□□□□ -0.63
COL8A1-202ENST00000273342 BCL3P20749 454 aa11.09□□□□□ -0.63
COL8A1-202ENST00000273342 MSX1P28360 303 aa11.09□□□□□ -0.63
COL8A1-202ENST00000273342 RBM11P57052 281 aaKnown RBP11.09□□□□□ -0.63
COL8A1-202ENST00000273342 ZFP36L1Q07352 338 aaKnown RBP11.09□□□□□ -0.63
COL8A1-202ENST00000273342 ARL16Q0P5N6 197 aa11.09□□□□□ -0.63
COL8A1-202ENST00000273342 FIP1L1Q6UN15 594 aaKnown RBP11.09□□□□□ -0.63
COL8A1-202ENST00000273342 ZNF488Q96MN9 340 aa11.09□□□□□ -0.63
COL8A1-202ENST00000273342 SMIM7Q9BQ49 75 aa11.09□□□□□ -0.63
COL8A1-202ENST00000273342 DOCK11Q5JSL3 2073 aa11.08□□□□□ -0.63
COL8A1-202ENST00000273342 PI4KAP42356 2102 aa11.08□□□□□ -0.64
COL8A1-202ENST00000273342 IGHV3-64DA0A0J9YX35 117 aa11.08□□□□□ -0.64
COL8A1-202ENST00000273342 CYB5R3P00387 301 aaPredicted RBP11.08□□□□□ -0.64
COL8A1-202ENST00000273342 OTX1P32242 354 aaPredicted RBP11.08□□□□□ -0.64
COL8A1-202ENST00000273342 MLF1P58340 268 aa11.08□□□□□ -0.64
COL8A1-202ENST00000273342 HERPUD1Q15011 391 aa11.08□□□□□ -0.64
COL8A1-202ENST00000273342 Q6ZRM9 215 aa11.08□□□□□ -0.64
COL8A1-202ENST00000273342 C16orf82Q7Z2V1 217 aa11.08□□□□□ -0.64
COL8A1-202ENST00000273342 OR10A7Q8NGE5 316 aa11.08□□□□□ -0.64
COL8A1-202ENST00000273342 OR1F12Q8NHA8 337 aa11.08□□□□□ -0.64
COL8A1-202ENST00000273342 PLPPR1Q8TBJ4 325 aa11.08□□□□□ -0.64
COL8A1-202ENST00000273342 PCGF1Q9BSM1 259 aa11.08□□□□□ -0.64
COL8A1-202ENST00000273342 A0A1W2PR77 199 aa11.08□□□□□ -0.64
COL8A1-202ENST00000273342 RPL36A-HNRNPH2H7BZ11 118 aa11.08□□□□□ -0.64
COL8A1-202ENST00000273342 HBE1P02100 147 aa11.08□□□□□ -0.64
COL8A1-202ENST00000273342 CCL3P10147 92 aa11.08□□□□□ -0.64
COL8A1-202ENST00000273342 PSG2P11465 335 aa11.08□□□□□ -0.64
COL8A1-202ENST00000273342 GZMHP20718 246 aa11.08□□□□□ -0.64
COL8A1-202ENST00000273342 ID3Q02535 119 aa11.08□□□□□ -0.64
COL8A1-202ENST00000273342 EXT1Q16394 746 aa11.08□□□□□ -0.64
COL8A1-202ENST00000273342 OR8G2PQ6IF36 304 aa11.08□□□□□ -0.64
COL8A1-202ENST00000273342 GATAD1Q8WUU5 269 aa11.08□□□□□ -0.64
COL8A1-202ENST00000273342 RDH5Q92781 318 aa11.08□□□□□ -0.64
COL8A1-202ENST00000273342 SRXN1Q9BYN0 137 aa11.08□□□□□ -0.64
COL8A1-202ENST00000273342 Q9N2K0 584 aa11.08□□□□□ -0.64
COL8A1-202ENST00000273342 CRIM1Q9NZV1 1036 aa11.08□□□□□ -0.64
COL8A1-202ENST00000273342 A0A0J9YW62 118 aa11.07□□□□□ -0.64
COL8A1-202ENST00000273342 A0A1B0GUS0 222 aa11.07□□□□□ -0.64
COL8A1-202ENST00000273342 VDAC1P21796 283 aa11.07□□□□□ -0.64
COL8A1-202ENST00000273342 CD27P26842 260 aa11.07□□□□□ -0.64
COL8A1-202ENST00000273342 COL19A1Q14993 1142 aa11.07□□□□□ -0.64
COL8A1-202ENST00000273342 LHFPL2Q6ZUX7 228 aa11.07□□□□□ -0.64
COL8A1-202ENST00000273342 YRDCQ86U90 279 aaKnown RBP11.07□□□□□ -0.64
COL8A1-202ENST00000273342 SLC25A45Q8N413 288 aa11.07□□□□□ -0.64
COL8A1-202ENST00000273342 ZIC4Q8N9L1 334 aa11.07□□□□□ -0.64
COL8A1-202ENST00000273342 SNIP1Q8TAD8 396 aaKnown RBP11.07□□□□□ -0.64
COL8A1-202ENST00000273342 GPR146Q96CH1 333 aa11.07□□□□□ -0.64
COL8A1-202ENST00000273342 OR51B6Q9H340 312 aa11.07□□□□□ -0.64
COL8A1-202ENST00000273342 SDF2L1Q9HCN8 221 aa11.07□□□□□ -0.64
COL8A1-202ENST00000273342 PITPNC1Q9UKF7 332 aa11.07□□□□□ -0.64
COL8A1-202ENST00000273342 FUT9Q9Y231 359 aa11.07□□□□□ -0.64
COL8A1-202ENST00000273342 ARGFXA6NJG6 315 aa11.07□□□□□ -0.64
COL8A1-202ENST00000273342 PIAS2O75928 621 aa11.07□□□□□ -0.64
COL8A1-202ENST00000273342 SERPINE2P07093 398 aa11.07□□□□□ -0.64
COL8A1-202ENST00000273342 OR4A8P0C604 315 aa11.07□□□□□ -0.64
COL8A1-202ENST00000273342 CD33P20138 364 aa11.07□□□□□ -0.64
COL8A1-202ENST00000273342 GPM6AP51674 278 aa11.07□□□□□ -0.64
COL8A1-202ENST00000273342 PSG4Q00888 419 aa11.07□□□□□ -0.64
COL8A1-202ENST00000273342 PMS2P11Q13670 270 aa11.07□□□□□ -0.64
COL8A1-202ENST00000273342 NMSQ5H8A3 153 aa11.07□□□□□ -0.64
COL8A1-202ENST00000273342 SLC25A53Q5H9E4 307 aa11.07□□□□□ -0.64
COL8A1-202ENST00000273342 SPANXN5Q5MJ07 72 aa11.07□□□□□ -0.64
COL8A1-202ENST00000273342 RHBDD2Q6NTF9 364 aa11.07□□□□□ -0.64
COL8A1-202ENST00000273342 RCC1LQ96I51 464 aaKnown RBP11.07□□□□□ -0.64
COL8A1-202ENST00000273342 UCK1Q9HA47 277 aa11.07□□□□□ -0.64
COL8A1-202ENST00000273342 FREM1Q5H8C1 2179 aa11.07□□□□□ -0.64
COL8A1-202ENST00000273342 A8MWP6 167 aa11.06□□□□□ -0.64
COL8A1-202ENST00000273342 DAZAP2Q15038 168 aaPredicted RBP11.06□□□□□ -0.64
COL8A1-202ENST00000273342 WDR5BQ86VZ2 330 aa11.06□□□□□ -0.64
COL8A1-202ENST00000273342 C17orf82Q86X59 251 aaPredicted RBP11.06□□□□□ -0.64
COL8A1-202ENST00000273342 MRPL41Q8IXM3 137 aaKnown RBP11.06□□□□□ -0.64
COL8A1-202ENST00000273342 OR13D1Q8NGV5 346 aa11.06□□□□□ -0.64
COL8A1-202ENST00000273342 SGCZQ96LD1 299 aa11.06□□□□□ -0.64
COL8A1-202ENST00000273342 TMEM56Q96MV1 263 aa11.06□□□□□ -0.64
COL8A1-202ENST00000273342 CBLN4Q9NTU7 201 aa11.06□□□□□ -0.64
COL8A1-202ENST00000273342 CACNG5Q9UF02 275 aa11.06□□□□□ -0.64
COL8A1-202ENST00000273342 DKKL1Q9UK85 242 aa11.06□□□□□ -0.64
COL8A1-202ENST00000273342 RBM7Q9Y580 266 aaKnown RBP11.06□□□□□ -0.64
COL8A1-202ENST00000273342 CHCHD2Q9Y6H1 151 aaPredicted RBP11.06□□□□□ -0.64
COL8A1-202ENST00000273342 TMEM56-RWDD3S4R434 201 aa11.06□□□□□ -0.64
COL8A1-202ENST00000273342 IGKV1-6A0A0C4DH72 117 aa11.06□□□□□ -0.64
COL8A1-202ENST00000273342 SYNGR3O43761 229 aa11.06□□□□□ -0.64
COL8A1-202ENST00000273342 FGF7P21781 194 aa11.06□□□□□ -0.64
COL8A1-202ENST00000273342 UCP3P55916 312 aa11.06□□□□□ -0.64
COL8A1-202ENST00000273342 NCR3LG1Q68D85 454 aa11.06□□□□□ -0.64
COL8A1-202ENST00000273342 TMEM183AQ8IXX5 376 aa11.06□□□□□ -0.64
COL8A1-202ENST00000273342 OR1P1Q8NH06 330 aa11.06□□□□□ -0.64
COL8A1-202ENST00000273342 PPP1R3CQ9UQK1 317 aa11.06□□□□□ -0.64
COL8A1-202ENST00000273342 ATG2AQ2TAZ0 1938 aa11.06□□□□□ -0.64
COL8A1-202ENST00000273342 EGR1P18146 543 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms