RNA–Protein interactions for RNA: ENST00000273064.10

CNOT9-201, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT9, Length 4,079 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-201ENST00000273064 CPEB3Q8NE35 698 aaKnown RBP12.6□□□□□ -0.39
CNOT9-201ENST00000273064 FAHD2AQ96GK7 314 aa12.6□□□□□ -0.39
CNOT9-201ENST00000273064 PFDN5Q99471 154 aa12.6□□□□□ -0.39
CNOT9-201ENST00000273064 SH3BGRL3Q9H299 93 aa12.6□□□□□ -0.39
CNOT9-201ENST00000273064 MED9Q9NWA0 146 aa12.6□□□□□ -0.39
CNOT9-201ENST00000273064 DFFBO76075 338 aa12.59□□□□□ -0.39
CNOT9-201ENST00000273064 VAX1Q5SQQ9 334 aa12.59□□□□□ -0.39
CNOT9-201ENST00000273064 FBXW9Q5XUX1 488 aa12.59□□□□□ -0.39
CNOT9-201ENST00000273064 HEXA-AS1Q9H8Q6 139 aa12.59□□□□□ -0.39
CNOT9-201ENST00000273064 ATP23Q9Y6H3 246 aa12.59□□□□□ -0.39
CNOT9-201ENST00000273064 NPBWR1P48145 328 aa12.59□□□□□ -0.39
CNOT9-201ENST00000273064 IP6K3Q96PC2 410 aa12.59□□□□□ -0.39
CNOT9-201ENST00000273064 MMP26Q9NRE1 261 aa12.59□□□□□ -0.39
CNOT9-201ENST00000273064 PRELID3BQ9Y3B1 194 aa12.59□□□□□ -0.39
CNOT9-201ENST00000273064 RNF212BA8MTL3 300 aa12.59□□□□□ -0.39
CNOT9-201ENST00000273064 SHOXO15266 292 aa12.59□□□□□ -0.39
CNOT9-201ENST00000273064 KCNJ3P48549 501 aa12.59□□□□□ -0.39
CNOT9-201ENST00000273064 OR10P1Q8NGE3 313 aa12.59□□□□□ -0.39
CNOT9-201ENST00000273064 ABHD14BQ96IU4 210 aa12.59□□□□□ -0.39
CNOT9-201ENST00000273064 PTPN13Q12923 2485 aa12.59□□□□□ -0.39
CNOT9-201ENST00000273064 CD74P04233 296 aa12.58□□□□□ -0.39
CNOT9-201ENST00000273064 NSUN5P2Q63ZY6 315 aa12.58□□□□□ -0.39
CNOT9-201ENST00000273064 ASPHD2Q6ICH7 369 aa12.58□□□□□ -0.39
CNOT9-201ENST00000273064 Q96M66 194 aa12.58□□□□□ -0.39
CNOT9-201ENST00000273064 C12orf57Q99622 126 aa12.58□□□□□ -0.39
CNOT9-201ENST00000273064 ARFGEF3Q5TH69 2177 aa12.58□□□□□ -0.4
CNOT9-201ENST00000273064 A0A1W2PPE2 198 aa12.58□□□□□ -0.4
CNOT9-201ENST00000273064 KITLGP21583 273 aa12.58□□□□□ -0.4
CNOT9-201ENST00000273064 WSB1Q9Y6I7 421 aa12.58□□□□□ -0.4
CNOT9-201ENST00000273064 RNF222A6NCQ9 220 aa12.58□□□□□ -0.4
CNOT9-201ENST00000273064 TUBAL3A6NHL2 446 aa12.58□□□□□ -0.4
CNOT9-201ENST00000273064 H0YIZ8 118 aa12.58□□□□□ -0.4
CNOT9-201ENST00000273064 IGHMP01871 453 aa12.58□□□□□ -0.4
CNOT9-201ENST00000273064 MPGP29372 298 aa12.58□□□□□ -0.4
CNOT9-201ENST00000273064 EWSR1Q01844 656 aaKnown RBP eCLIP12.58□□□□□ -0.4
CNOT9-201ENST00000273064 NANPQ8TBE9 248 aa12.58□□□□□ -0.4
CNOT9-201ENST00000273064 MRPS24Q96EL2 167 aaKnown RBP12.58□□□□□ -0.4
CNOT9-201ENST00000273064 COL4A3Q01955 1670 aa12.58□□□□□ -0.4
CNOT9-201ENST00000273064 A0A1W2PPH5 198 aa12.57□□□□□ -0.4
CNOT9-201ENST00000273064 PROB1E7EW31 1015 aa12.57□□□□□ -0.4
CNOT9-201ENST00000273064 G6PCP35575 357 aa12.57□□□□□ -0.4
CNOT9-201ENST00000273064 ETV3LQ6ZN32 361 aa12.57□□□□□ -0.4
CNOT9-201ENST00000273064 LYG1Q8N1E2 194 aa12.57□□□□□ -0.4
CNOT9-201ENST00000273064 CCL17Q92583 94 aa12.57□□□□□ -0.4
CNOT9-201ENST00000273064 RSG1Q9BU20 258 aa12.57□□□□□ -0.4
CNOT9-201ENST00000273064 GPR87Q9BY21 358 aa12.57□□□□□ -0.4
CNOT9-201ENST00000273064 DECR2Q9NUI1 292 aa12.57□□□□□ -0.4
CNOT9-201ENST00000273064 B4E171 279 aa12.57□□□□□ -0.4
CNOT9-201ENST00000273064 WNT9BO14905 357 aa12.57□□□□□ -0.4
CNOT9-201ENST00000273064 ST8SIA5O15466 376 aa12.57□□□□□ -0.4
CNOT9-201ENST00000273064 HBE1P02100 147 aa12.57□□□□□ -0.4
CNOT9-201ENST00000273064 ATP6V0CP27449 155 aa12.57□□□□□ -0.4
CNOT9-201ENST00000273064 PMELP40967 661 aa12.57□□□□□ -0.4
CNOT9-201ENST00000273064 TSPAN7P41732 249 aa12.57□□□□□ -0.4
CNOT9-201ENST00000273064 RAB31Q13636 194 aa12.57□□□□□ -0.4
CNOT9-201ENST00000273064 SMIM7Q9BQ49 75 aa12.57□□□□□ -0.4
CNOT9-201ENST00000273064 RIMS4Q9H426 269 aaPredicted RBP12.57□□□□□ -0.4
CNOT9-201ENST00000273064 OR1A1Q9P1Q5 309 aa12.57□□□□□ -0.4
CNOT9-201ENST00000273064 SPTBN4Q9H254 2564 aa12.57□□□□□ -0.4
CNOT9-201ENST00000273064 CHD8Q9HCK8 2581 aa12.57□□□□□ -0.4
CNOT9-201ENST00000273064 TRDCB7Z8K6 153 aa12.57□□□□□ -0.4
CNOT9-201ENST00000273064 CELA3BP08861 270 aa12.57□□□□□ -0.4
CNOT9-201ENST00000273064 ZNF735P0CB33 412 aa12.57□□□□□ -0.4
CNOT9-201ENST00000273064 AWAT1Q58HT5 328 aa12.57□□□□□ -0.4
CNOT9-201ENST00000273064 LEAP2Q969E1 77 aa12.57□□□□□ -0.4
CNOT9-201ENST00000273064 TP53RKQ96S44 253 aa12.57□□□□□ -0.4
CNOT9-201ENST00000273064 LIN7CQ9NUP9 197 aaKnown RBP12.57□□□□□ -0.4
CNOT9-201ENST00000273064 MYO18BQ8IUG5 2567 aa12.57□□□□□ -0.4
CNOT9-201ENST00000273064 C9orf172C9J069 976 aa12.57□□□□□ -0.4
CNOT9-201ENST00000273064 CYB5BO43169 146 aa12.57□□□□□ -0.4
CNOT9-201ENST00000273064 APELAP0DMC3 54 aa12.57□□□□□ -0.4
CNOT9-201ENST00000273064 ZIC4Q8N9L1 334 aa12.57□□□□□ -0.4
CNOT9-201ENST00000273064 TRGV8A0A0C4DH27 118 aa12.56□□□□□ -0.4
CNOT9-201ENST00000273064 A0A1W2PPQ1 181 aa12.56□□□□□ -0.4
CNOT9-201ENST00000273064 MFSD2BA6NFX1 497 aa12.56□□□□□ -0.4
CNOT9-201ENST00000273064 VDAC1P21796 283 aa12.56□□□□□ -0.4
CNOT9-201ENST00000273064 PTGDSP41222 190 aa12.56□□□□□ -0.4
CNOT9-201ENST00000273064 EIF3IQ13347 325 aaKnown RBP12.56□□□□□ -0.4
CNOT9-201ENST00000273064 GNPNAT1Q96EK6 184 aaPredicted RBP12.56□□□□□ -0.4
CNOT9-201ENST00000273064 OPN3Q9H1Y3 402 aaPredicted RBP12.56□□□□□ -0.4
CNOT9-201ENST00000273064 RALYQ9UKM9 306 aaKnown RBP12.56□□□□□ -0.4
CNOT9-201ENST00000273064 STRAPQ9Y3F4 350 aaKnown RBP12.56□□□□□ -0.4
CNOT9-201ENST00000273064 PRRG2O14669 202 aa12.56□□□□□ -0.4
CNOT9-201ENST00000273064 SP9P0CG40 484 aa12.56□□□□□ -0.4
CNOT9-201ENST00000273064 ZNF708P17019 499 aa12.56□□□□□ -0.4
CNOT9-201ENST00000273064 TAS2R30P59541 319 aa12.56□□□□□ -0.4
CNOT9-201ENST00000273064 ZNF528Q3MIS6 628 aa12.56□□□□□ -0.4
CNOT9-201ENST00000273064 OR52L2PQ8NGH6 319 aa12.56□□□□□ -0.4
CNOT9-201ENST00000273064 RTBDNQ9BSG5 229 aaPredicted RBP12.56□□□□□ -0.4
CNOT9-201ENST00000273064 HIPK2Q9H2X6 1198 aa12.56□□□□□ -0.4
CNOT9-201ENST00000273064 VPS13AQ96RL7 3174 aa12.56□□□□□ -0.4
CNOT9-201ENST00000273064 TMEM30CPA0ZSE6 113 aa12.56□□□□□ -0.4
CNOT9-201ENST00000273064 FBP1P09467 338 aa12.56□□□□□ -0.4
CNOT9-201ENST00000273064 SLC25A4P12235 298 aa12.56□□□□□ -0.4
CNOT9-201ENST00000273064 EIF2S3LQ2VIR3 472 aaKnown RBP12.56□□□□□ -0.4
CNOT9-201ENST00000273064 SMIM21Q3B7S5 101 aa12.56□□□□□ -0.4
CNOT9-201ENST00000273064 FDCSPQ8NFU4 85 aa12.56□□□□□ -0.4
CNOT9-201ENST00000273064 OR8U8P0C7N1 319 aa12.55□□□□□ -0.4
CNOT9-201ENST00000273064 ZNF17P17021 662 aa12.55□□□□□ -0.4
CNOT9-201ENST00000273064 FGF7P21781 194 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms