RNA–Protein interactions for RNA: ENST00000270142.10

SOD1-201, Transcript of superoxide dismutase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOD1, Length 966 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD1-201ENST00000270142 SLC35B1P78383 322 aa12.02□□□□□ -0.49
SOD1-201ENST00000270142 CD69Q07108 199 aa12.02□□□□□ -0.49
SOD1-201ENST00000270142 EBI3Q14213 229 aa12.02□□□□□ -0.49
SOD1-201ENST00000270142 NHLRC3Q5JS37 347 aa12.02□□□□□ -0.49
SOD1-201ENST00000270142 DDI2Q5TDH0 399 aa12.02□□□□□ -0.49
SOD1-201ENST00000270142 FOXRED2Q8IWF2 684 aa12.02□□□□□ -0.49
SOD1-201ENST00000270142 IZUMO1Q8IYV9 350 aa12.02□□□□□ -0.49
SOD1-201ENST00000270142 COMMD1Q8N668 190 aa12.02□□□□□ -0.49
SOD1-201ENST00000270142 GPR148Q8TDV2 347 aa12.02□□□□□ -0.49
SOD1-201ENST00000270142 TMEM106AQ96A25 262 aa12.02□□□□□ -0.49
SOD1-201ENST00000270142 EAF1Q96JC9 268 aaPredicted RBP12.02□□□□□ -0.49
SOD1-201ENST00000270142 DUX3Q96PT4 197 aa12.02□□□□□ -0.49
SOD1-201ENST00000270142 MCRIP2Q9BUT9 160 aaKnown RBP12.02□□□□□ -0.49
SOD1-201ENST00000270142 IL36GQ9NZH8 169 aa12.02□□□□□ -0.49
SOD1-201ENST00000270142 RPL36Q9Y3U8 105 aaKnown RBP12.02□□□□□ -0.49
SOD1-201ENST00000270142 IGHV3-43A0A0B4J1X8 118 aa12.01□□□□□ -0.49
SOD1-201ENST00000270142 A0A1W2PP11 408 aa12.01□□□□□ -0.49
SOD1-201ENST00000270142 NCBP2LA6PVI3 153 aaKnown RBP12.01□□□□□ -0.49
SOD1-201ENST00000270142 GAPDHP04406 335 aaKnown RBP12.01□□□□□ -0.49
SOD1-201ENST00000270142 CD2P06729 351 aa12.01□□□□□ -0.49
SOD1-201ENST00000270142 IGHV3-43DP0DP04 118 aa12.01□□□□□ -0.49
SOD1-201ENST00000270142 SERPINA2P20848 420 aa12.01□□□□□ -0.49
SOD1-201ENST00000270142 SLC6A1P30531 599 aa12.01□□□□□ -0.49
SOD1-201ENST00000270142 ZNF93P35789 620 aaPredicted RBP12.01□□□□□ -0.49
SOD1-201ENST00000270142 RPL22L1Q6P5R6 122 aaKnown RBP12.01□□□□□ -0.49
SOD1-201ENST00000270142 TGIF2LXQ8IUE1 241 aa12.01□□□□□ -0.49
SOD1-201ENST00000270142 ZNF695Q8IW36 515 aa12.01□□□□□ -0.49
SOD1-201ENST00000270142 Q8N6K4 173 aa12.01□□□□□ -0.49
SOD1-201ENST00000270142 Q8N9W7 124 aa12.01□□□□□ -0.49
SOD1-201ENST00000270142 OR52N1Q8NH53 320 aa12.01□□□□□ -0.49
SOD1-201ENST00000270142 ARL11Q969Q4 196 aa12.01□□□□□ -0.49
SOD1-201ENST00000270142 ORAI1Q96D31 301 aa12.01□□□□□ -0.49
SOD1-201ENST00000270142 B9D2Q9BPU9 175 aa12.01□□□□□ -0.49
SOD1-201ENST00000270142 C9orf16Q9BUW7 83 aa12.01□□□□□ -0.49
SOD1-201ENST00000270142 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.01□□□□□ -0.49
SOD1-201ENST00000270142 GFOD1Q9NXC2 390 aa12.01□□□□□ -0.49
SOD1-201ENST00000270142 H0YHG0 523 aa12□□□□□ -0.49
SOD1-201ENST00000270142 SDCBPO00560 298 aaPredicted RBP12□□□□□ -0.49
SOD1-201ENST00000270142 CSTBP04080 98 aaKnown RBP12□□□□□ -0.49
SOD1-201ENST00000270142 GZMHP20718 246 aa12□□□□□ -0.49
SOD1-201ENST00000270142 GPR12P47775 334 aa12□□□□□ -0.49
SOD1-201ENST00000270142 PPP3R1P63098 170 aa12□□□□□ -0.49
SOD1-201ENST00000270142 SMN1Q16637 294 aaKnown RBP12□□□□□ -0.49
SOD1-201ENST00000270142 CCDC58Q4VC31 144 aa12□□□□□ -0.49
SOD1-201ENST00000270142 KLHL22Q53GT1 634 aa12□□□□□ -0.49
SOD1-201ENST00000270142 ATAD3CQ5T2N8 411 aa12□□□□□ -0.49
SOD1-201ENST00000270142 OR2G6Q5TZ20 316 aa12□□□□□ -0.49
SOD1-201ENST00000270142 LCNL1Q6ZST4 164 aa12□□□□□ -0.49
SOD1-201ENST00000270142 LINC00596Q86U02 117 aa12□□□□□ -0.49
SOD1-201ENST00000270142 LINC00311Q8N616 119 aa12□□□□□ -0.49
SOD1-201ENST00000270142 OR52M1Q8NGK5 317 aa12□□□□□ -0.49
SOD1-201ENST00000270142 OR13C5Q8NGS8 318 aa12□□□□□ -0.49
SOD1-201ENST00000270142 CCDC107Q8WV48 283 aa12□□□□□ -0.49
SOD1-201ENST00000270142 RBMXL1Q96E39 390 aaKnown RBP12□□□□□ -0.49
SOD1-201ENST00000270142 RAX2Q96IS3 184 aa12□□□□□ -0.49
SOD1-201ENST00000270142 ABCG5Q9H222 651 aa12□□□□□ -0.49
SOD1-201ENST00000270142 FGF20Q9NP95 211 aaPredicted RBP12□□□□□ -0.49
SOD1-201ENST00000270142 TMEM138Q9NPI0 162 aa12□□□□□ -0.49
SOD1-201ENST00000270142 LIN7CQ9NUP9 197 aaKnown RBP12□□□□□ -0.49
SOD1-201ENST00000270142 SIRT4Q9Y6E7 314 aaPredicted RBP12□□□□□ -0.49
SOD1-201ENST00000270142 AP4M1O00189 453 aa11.99□□□□□ -0.49
SOD1-201ENST00000270142 SLC31A2O15432 143 aa11.99□□□□□ -0.49
SOD1-201ENST00000270142 RPLP1P05386 114 aaKnown RBP11.99□□□□□ -0.49
SOD1-201ENST00000270142 BDKRB2P30411 391 aa11.99□□□□□ -0.49
SOD1-201ENST00000270142 ETV1P50549 477 aa11.99□□□□□ -0.49
SOD1-201ENST00000270142 MPV17LQ2QL34 196 aa11.99□□□□□ -0.49
SOD1-201ENST00000270142 TEX38Q6PEX7 206 aa11.99□□□□□ -0.49
SOD1-201ENST00000270142 TMEM104Q8NE00 496 aa11.99□□□□□ -0.49
SOD1-201ENST00000270142 OR2T10Q8NGZ9 312 aa11.99□□□□□ -0.49
SOD1-201ENST00000270142 RTN4IP1Q8WWV3 396 aaPredicted RBP11.99□□□□□ -0.49
SOD1-201ENST00000270142 ST6GALNAC6Q969X2 333 aa11.99□□□□□ -0.49
SOD1-201ENST00000270142 S100A13Q99584 98 aa11.99□□□□□ -0.49
SOD1-201ENST00000270142 MAGEA13PA6NCF6 341 aa11.98□□□□□ -0.49
SOD1-201ENST00000270142 ZNF736B4DX44 427 aaPredicted RBP11.98□□□□□ -0.49
SOD1-201ENST00000270142 AIPO00170 330 aa11.98□□□□□ -0.49
SOD1-201ENST00000270142 CCL24O00175 119 aa11.98□□□□□ -0.49
SOD1-201ENST00000270142 ORC5O43913 435 aa11.98□□□□□ -0.49
SOD1-201ENST00000270142 WBP4O75554 376 aaKnown RBP11.98□□□□□ -0.49
SOD1-201ENST00000270142 LALBAP00709 142 aa11.98□□□□□ -0.49
SOD1-201ENST00000270142 MT-ND4P03905 459 aa11.98□□□□□ -0.49
SOD1-201ENST00000270142 VSIG8P0DPA2 414 aa11.98□□□□□ -0.49
SOD1-201ENST00000270142 IGFBP3P17936 291 aaPredicted RBP11.98□□□□□ -0.49
SOD1-201ENST00000270142 RAB25P57735 213 aa11.98□□□□□ -0.49
SOD1-201ENST00000270142 DGCR2P98153 550 aa11.98□□□□□ -0.49
SOD1-201ENST00000270142 RIPK1Q13546 671 aa11.98□□□□□ -0.49
SOD1-201ENST00000270142 PNLIPRP3Q17RR3 467 aa11.98□□□□□ -0.49
SOD1-201ENST00000270142 DEFB136Q30KP8 78 aa11.98□□□□□ -0.49
SOD1-201ENST00000270142 SLC22A6Q4U2R8 563 aa11.98□□□□□ -0.49
SOD1-201ENST00000270142 UNQ9370/PRO34162Q6UXP9 181 aa11.98□□□□□ -0.49
SOD1-201ENST00000270142 ZNF497Q6ZNH5 498 aa11.98□□□□□ -0.49
SOD1-201ENST00000270142 C8orf31Q8N9H6 132 aa11.98□□□□□ -0.49
SOD1-201ENST00000270142 NEK7Q8TDX7 302 aa11.98□□□□□ -0.49
SOD1-201ENST00000270142 TFAP2CQ92754 450 aa11.98□□□□□ -0.49
SOD1-201ENST00000270142 SMIM19Q96E16 107 aa11.98□□□□□ -0.49
SOD1-201ENST00000270142 ZNF184Q99676 751 aaPredicted RBP11.98□□□□□ -0.49
SOD1-201ENST00000270142 DCLRE1BQ9H816 532 aa11.98□□□□□ -0.49
SOD1-201ENST00000270142 PLSCR3Q9NRY6 295 aa11.98□□□□□ -0.49
SOD1-201ENST00000270142 PAK1IP1Q9NWT1 392 aaPredicted RBP11.98□□□□□ -0.49
SOD1-201ENST00000270142 HUWE1Q7Z6Z7 4374 aaKnown RBP11.97□□□□□ -0.49
SOD1-201ENST00000270142 TRBV5-5A0A0J9YX44 114 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms