RNA–Protein interactions for RNA: ENST00000264010.8

CTCF-201, Transcript of CCCTC-binding factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTCF, Length 3,939 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCF-201ENST00000264010 FER1L5A0AVI2 2057 aa14.1□□□□□ -0.15
CTCF-201ENST00000264010 NTF3P20783 257 aa14.1□□□□□ -0.15
CTCF-201ENST00000264010 RPL12P30050 165 aaKnown RBP14.1□□□□□ -0.15
CTCF-201ENST00000264010 KRTDAPP60985 99 aa14.1□□□□□ -0.15
CTCF-201ENST00000264010 SPCS3P61009 180 aa14.1□□□□□ -0.15
CTCF-201ENST00000264010 C3AR1Q16581 482 aa14.1□□□□□ -0.15
CTCF-201ENST00000264010 VHLLQ6RSH7 139 aa14.1□□□□□ -0.15
CTCF-201ENST00000264010 SDSLQ96GA7 329 aa14.1□□□□□ -0.15
CTCF-201ENST00000264010 SEC11CQ9BY50 192 aa14.1□□□□□ -0.15
CTCF-201ENST00000264010 ZNF703Q9H7S9 590 aaPredicted RBP14.1□□□□□ -0.15
CTCF-201ENST00000264010 TRGC2P03986 189 aa14.1□□□□□ -0.15
CTCF-201ENST00000264010 HLA-GP17693 338 aa14.1□□□□□ -0.15
CTCF-201ENST00000264010 CRYGSP22914 178 aa14.1□□□□□ -0.15
CTCF-201ENST00000264010 DUSP1P28562 367 aa14.1□□□□□ -0.15
CTCF-201ENST00000264010 MPGP29372 298 aa14.1□□□□□ -0.15
CTCF-201ENST00000264010 C11orf42Q8N5U0 333 aa14.1□□□□□ -0.15
CTCF-201ENST00000264010 HIST1H2BAQ96A08 127 aa14.1□□□□□ -0.15
CTCF-201ENST00000264010 OR14J1Q9UGF5 321 aa14.1□□□□□ -0.15
CTCF-201ENST00000264010 OTX1P32242 354 aaPredicted RBP14.09□□□□□ -0.15
CTCF-201ENST00000264010 SP6Q3SY56 376 aa14.09□□□□□ -0.15
CTCF-201ENST00000264010 SNIP1Q8TAD8 396 aaKnown RBP14.09□□□□□ -0.15
CTCF-201ENST00000264010 RPUSD4Q96CM3 377 aaKnown RBP14.09□□□□□ -0.15
CTCF-201ENST00000264010 MISP3Q96FF7 219 aa14.09□□□□□ -0.15
CTCF-201ENST00000264010 TMEM68Q96MH6 324 aa14.09□□□□□ -0.15
CTCF-201ENST00000264010 LINC00470Q9BZP3 86 aa14.09□□□□□ -0.15
CTCF-201ENST00000264010 NAA60Q9H7X0 242 aa14.09□□□□□ -0.15
CTCF-201ENST00000264010 PLEKHA2Q9HB19 425 aa14.09□□□□□ -0.15
CTCF-201ENST00000264010 PRDM14Q9GZV8 571 aa14.09□□□□□ -0.15
CTCF-201ENST00000264010 KCNS2Q9ULS6 477 aa14.09□□□□□ -0.15
CTCF-201ENST00000264010 ST8SIA3O43173 380 aa14.09□□□□□ -0.15
CTCF-201ENST00000264010 SERPINE2P07093 398 aa14.09□□□□□ -0.15
CTCF-201ENST00000264010 FCGR3AP08637 254 aa14.09□□□□□ -0.15
CTCF-201ENST00000264010 IL1F10Q8WWZ1 152 aa14.09□□□□□ -0.15
CTCF-201ENST00000264010 FAM210BQ96KR6 192 aa14.09□□□□□ -0.15
CTCF-201ENST00000264010 RIMS4Q9H426 269 aaPredicted RBP14.09□□□□□ -0.15
CTCF-201ENST00000264010 XKRY2A2RUG3 117 aa14.09□□□□□ -0.15
CTCF-201ENST00000264010 PINLYPA6NC86 204 aa14.09□□□□□ -0.15
CTCF-201ENST00000264010 H2AFB1P0C5Y9 115 aa14.09□□□□□ -0.15
CTCF-201ENST00000264010 HNRNPA3P51991 378 aaKnown RBP14.09□□□□□ -0.15
CTCF-201ENST00000264010 GNG3P63215 75 aa14.09□□□□□ -0.15
CTCF-201ENST00000264010 TMEM211Q6ICI0 200 aa14.09□□□□□ -0.15
CTCF-201ENST00000264010 RTL8AQ9BWD3 113 aa14.09□□□□□ -0.15
CTCF-201ENST00000264010 OSGIN2Q9Y236 505 aa14.09□□□□□ -0.15
CTCF-201ENST00000264010 H7BYZ3 331 aa14.08□□□□□ -0.16
CTCF-201ENST00000264010 NHLH2Q02577 135 aa14.08□□□□□ -0.16
CTCF-201ENST00000264010 TLE4Q04727 773 aa14.08□□□□□ -0.16
CTCF-201ENST00000264010 ZDHHC8Q9ULC8 765 aa14.08□□□□□ -0.16
CTCF-201ENST00000264010 hCG_38984A0A1B0GV85 526 aa14.08□□□□□ -0.16
CTCF-201ENST00000264010 CD300LBA8K4G0 201 aa14.08□□□□□ -0.16
CTCF-201ENST00000264010 E5RGE8 158 aa14.08□□□□□ -0.16
CTCF-201ENST00000264010 G3V3Q6 166 aa14.08□□□□□ -0.16
CTCF-201ENST00000264010 JTBO76095 146 aa14.08□□□□□ -0.16
CTCF-201ENST00000264010 CELA3AP09093 270 aa14.08□□□□□ -0.16
CTCF-201ENST00000264010 RBM11P57052 281 aaKnown RBP14.08□□□□□ -0.16
CTCF-201ENST00000264010 NRN1LQ496H8 165 aa14.08□□□□□ -0.16
CTCF-201ENST00000264010 WDR13Q9H1Z4 485 aa14.08□□□□□ -0.16
CTCF-201ENST00000264010 KCNIP1Q9NZI2 227 aa14.08□□□□□ -0.16
CTCF-201ENST00000264010 NSG2Q9Y328 171 aa14.08□□□□□ -0.16
CTCF-201ENST00000264010 PMS2P1A4D2B8 440 aa14.08□□□□□ -0.16
CTCF-201ENST00000264010 NUDT19A8MXV4 375 aa14.08□□□□□ -0.16
CTCF-201ENST00000264010 RAB29O14966 203 aa14.08□□□□□ -0.16
CTCF-201ENST00000264010 DEGS1O15121 323 aa14.08□□□□□ -0.16
CTCF-201ENST00000264010 NDUFA2O43678 99 aa14.08□□□□□ -0.16
CTCF-201ENST00000264010 APOA2P02652 100 aa14.08□□□□□ -0.16
CTCF-201ENST00000264010 RPLP1P05386 114 aaKnown RBP14.08□□□□□ -0.16
CTCF-201ENST00000264010 DVL1P1P54792 670 aaPredicted RBP14.08□□□□□ -0.16
CTCF-201ENST00000264010 CSRP2Q16527 193 aa14.08□□□□□ -0.16
CTCF-201ENST00000264010 LYPD6Q86Y78 171 aa14.08□□□□□ -0.16
CTCF-201ENST00000264010 RDH5Q92781 318 aa14.08□□□□□ -0.16
CTCF-201ENST00000264010 FAM117AQ9C073 453 aa14.08□□□□□ -0.16
CTCF-201ENST00000264010 MPTX1A8MV57 137 aa14.07□□□□□ -0.16
CTCF-201ENST00000264010 HS3ST1O14792 307 aa14.07□□□□□ -0.16
CTCF-201ENST00000264010 ESPL1Q14674 2120 aa14.07□□□□□ -0.16
CTCF-201ENST00000264010 ANKRD55Q3KP44 614 aa14.07□□□□□ -0.16
CTCF-201ENST00000264010 IL34Q6ZMJ4 242 aa14.07□□□□□ -0.16
CTCF-201ENST00000264010 TVP23CQ96ET8 276 aa14.07□□□□□ -0.16
CTCF-201ENST00000264010 PRRX2Q99811 253 aa14.07□□□□□ -0.16
CTCF-201ENST00000264010 CALCRP30988 508 aa14.07□□□□□ -0.16
CTCF-201ENST00000264010 OR8B8Q15620 311 aa14.07□□□□□ -0.16
CTCF-201ENST00000264010 ST6GALNAC3Q8NDV1 305 aa14.07□□□□□ -0.16
CTCF-201ENST00000264010 OR10AD1Q8NGE0 317 aa14.07□□□□□ -0.16
CTCF-201ENST00000264010 WDR87Q6ZQQ6 2873 aa14.07□□□□□ -0.16
CTCF-201ENST00000264010 E9PLN8 166 aa14.07□□□□□ -0.16
CTCF-201ENST00000264010 PRR18Q8N4B5 295 aa14.07□□□□□ -0.16
CTCF-201ENST00000264010 OBP2BQ9NPH6 170 aa14.07□□□□□ -0.16
CTCF-201ENST00000264010 STARD10Q9Y365 291 aa14.07□□□□□ -0.16
CTCF-201ENST00000264010 OR5AC1P0C628 307 aa14.06□□□□□ -0.16
CTCF-201ENST00000264010 RCC1P18754 421 aaPredicted RBP14.06□□□□□ -0.16
CTCF-201ENST00000264010 RPL19P84098 196 aaKnown RBP14.06□□□□□ -0.16
CTCF-201ENST00000264010 IQCJQ1A5X6 159 aa14.06□□□□□ -0.16
CTCF-201ENST00000264010 C1orf147Q96MC9 270 aaPredicted RBP14.06□□□□□ -0.16
CTCF-201ENST00000264010 MPC1Q9Y5U8 109 aa14.06□□□□□ -0.16
CTCF-201ENST00000264010 RRP8O43159 456 aaKnown RBP14.06□□□□□ -0.16
CTCF-201ENST00000264010 C1QL1O75973 258 aa14.06□□□□□ -0.16
CTCF-201ENST00000264010 NEURL1O76050 574 aa14.06□□□□□ -0.16
CTCF-201ENST00000264010 COX5BP10606 129 aa14.06□□□□□ -0.16
CTCF-201ENST00000264010 RTN4RL2Q86UN3 420 aa14.06□□□□□ -0.16
CTCF-201ENST00000264010 MS4A10Q96PG2 267 aa14.06□□□□□ -0.16
CTCF-201ENST00000264010 POLDIP2Q9Y2S7 368 aa14.06□□□□□ -0.16
CTCF-201ENST00000264010 OR5B21A6NL26 309 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 95.1 ms