RNA–Protein interactions for RNA: ENST00000263694.8

SNRNP40-201, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP40, Length 1,597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-201ENST00000263694 CLDND2Q8NHS1 167 aa8.05□□□□□ -1.12
SNRNP40-201ENST00000263694 ZFAND2BQ8WV99 257 aa8.05□□□□□ -1.12
SNRNP40-201ENST00000263694 COX4I2Q96KJ9 171 aa8.05□□□□□ -1.12
SNRNP40-201ENST00000263694 SLC6A7Q99884 636 aa8.05□□□□□ -1.12
SNRNP40-201ENST00000263694 PIMREGQ9BSJ6 248 aa8.05□□□□□ -1.12
SNRNP40-201ENST00000263694 TMPRSS13Q9BYE2 586 aa8.05□□□□□ -1.12
SNRNP40-201ENST00000263694 FAM234AQ9H0X4 552 aa8.05□□□□□ -1.12
SNRNP40-201ENST00000263694 ZNF286AQ9HBT8 521 aa8.05□□□□□ -1.12
SNRNP40-201ENST00000263694 BEX4Q9NWD9 120 aaPredicted RBP8.05□□□□□ -1.12
SNRNP40-201ENST00000263694 MCUBQ9NWR8 336 aa8.05□□□□□ -1.12
SNRNP40-201ENST00000263694 MIOXQ9UGB7 285 aa8.05□□□□□ -1.12
SNRNP40-201ENST00000263694 ANXA10Q9UJ72 324 aa8.05□□□□□ -1.12
SNRNP40-201ENST00000263694 WNK2Q9Y3S1 2297 aa8.05□□□□□ -1.12
SNRNP40-201ENST00000263694 IGHV4-61A0A0C4DH41 118 aa8.05□□□□□ -1.12
SNRNP40-201ENST00000263694 VWC2LB2RUY7 222 aa8.05□□□□□ -1.12
SNRNP40-201ENST00000263694 TRDCB7Z8K6 153 aa8.05□□□□□ -1.12
SNRNP40-201ENST00000263694 C12orf77C9JDV5 145 aa8.05□□□□□ -1.12
SNRNP40-201ENST00000263694 LYRM1O43325 122 aa8.05□□□□□ -1.12
SNRNP40-201ENST00000263694 RAB3DO95716 219 aa8.05□□□□□ -1.12
SNRNP40-201ENST00000263694 AKAIN1P0CW23 69 aa8.05□□□□□ -1.12
SNRNP40-201ENST00000263694 OMGP23515 440 aa8.05□□□□□ -1.12
SNRNP40-201ENST00000263694 ZFP36P26651 326 aaKnown RBP8.05□□□□□ -1.12
SNRNP40-201ENST00000263694 BTCP35070 178 aa8.05□□□□□ -1.12
SNRNP40-201ENST00000263694 SSTR5P35346 364 aa8.05□□□□□ -1.12
SNRNP40-201ENST00000263694 CCR6P51684 374 aa8.05□□□□□ -1.12
SNRNP40-201ENST00000263694 TAS2R19P59542 299 aa8.05□□□□□ -1.12
SNRNP40-201ENST00000263694 ARPC4P59998 168 aa8.05□□□□□ -1.12
SNRNP40-201ENST00000263694 LMO4P61968 165 aa8.05□□□□□ -1.12
SNRNP40-201ENST00000263694 RPL31P62899 125 aaKnown RBP8.05□□□□□ -1.12
SNRNP40-201ENST00000263694 SSBP1Q04837 148 aaKnown RBP8.05□□□□□ -1.12
SNRNP40-201ENST00000263694 ASAH1Q13510 395 aa8.05□□□□□ -1.12
SNRNP40-201ENST00000263694 ZNF273Q14593 569 aa8.05□□□□□ -1.12
SNRNP40-201ENST00000263694 HERPUD1Q15011 391 aa8.05□□□□□ -1.12
SNRNP40-201ENST00000263694 LTC4SQ16873 150 aa8.05□□□□□ -1.12
SNRNP40-201ENST00000263694 CLEC12BQ2HXU8 276 aa8.05□□□□□ -1.12
SNRNP40-201ENST00000263694 CHRFAM7AQ494W8 412 aa8.05□□□□□ -1.12
SNRNP40-201ENST00000263694 WDR25Q64LD2 544 aaPredicted RBP8.05□□□□□ -1.12
SNRNP40-201ENST00000263694 BTN2A1Q7KYR7 527 aa8.05□□□□□ -1.12
SNRNP40-201ENST00000263694 SPICQ8N5J4 248 aa8.05□□□□□ -1.12
SNRNP40-201ENST00000263694 OR8B3Q8NGG8 313 aa8.05□□□□□ -1.12
SNRNP40-201ENST00000263694 NEIL1Q96FI4 390 aaPredicted RBP8.05□□□□□ -1.12
SNRNP40-201ENST00000263694 KIRREL1Q96J84 757 aa8.05□□□□□ -1.12
SNRNP40-201ENST00000263694 OR8B2Q96RD0 313 aa8.05□□□□□ -1.12
SNRNP40-201ENST00000263694 RIMS4Q9H426 269 aaPredicted RBP8.05□□□□□ -1.12
SNRNP40-201ENST00000263694 TAF9BQ9HBM6 251 aa8.05□□□□□ -1.12
SNRNP40-201ENST00000263694 MBNL3Q9NUK0 354 aaKnown RBP8.05□□□□□ -1.12
SNRNP40-201ENST00000263694 IGHV3-43A0A0B4J1X8 118 aa8.04□□□□□ -1.12
SNRNP40-201ENST00000263694 F5H0A9 414 aaPredicted RBP8.04□□□□□ -1.12
SNRNP40-201ENST00000263694 H7C1Q1 480 aa8.04□□□□□ -1.12
SNRNP40-201ENST00000263694 BET1O15155 118 aa8.04□□□□□ -1.12
SNRNP40-201ENST00000263694 FABP7O15540 132 aa8.04□□□□□ -1.12
SNRNP40-201ENST00000263694 ECDO95905 644 aaPredicted RBP8.04□□□□□ -1.12
SNRNP40-201ENST00000263694 IGHV2-5P01817 119 aa8.04□□□□□ -1.12
SNRNP40-201ENST00000263694 HBZP02008 142 aa8.04□□□□□ -1.12
SNRNP40-201ENST00000263694 CD74P04233 296 aa8.04□□□□□ -1.12
SNRNP40-201ENST00000263694 AMY2AP04746 511 aa8.04□□□□□ -1.12
SNRNP40-201ENST00000263694 ZNF735P0CB33 412 aa8.04□□□□□ -1.12
SNRNP40-201ENST00000263694 IGHV3-43DP0DP04 118 aa8.04□□□□□ -1.12
SNRNP40-201ENST00000263694 CCL3L1P16619 93 aa8.04□□□□□ -1.12
SNRNP40-201ENST00000263694 ERP29P30040 261 aaKnown RBP8.04□□□□□ -1.12
SNRNP40-201ENST00000263694 OR3A3P47888 321 aa8.04□□□□□ -1.12
SNRNP40-201ENST00000263694 HLA-DRB3P79483 266 aa8.04□□□□□ -1.12
SNRNP40-201ENST00000263694 PAX5Q02548 391 aa8.04□□□□□ -1.12
SNRNP40-201ENST00000263694 RNASE10Q5GAN6 216 aaKnown RBP8.04□□□□□ -1.12
SNRNP40-201ENST00000263694 UTF1Q5T230 341 aa8.04□□□□□ -1.12
SNRNP40-201ENST00000263694 TMEM200BQ69YZ2 307 aa8.04□□□□□ -1.12
SNRNP40-201ENST00000263694 NRARPQ7Z6K4 114 aa8.04□□□□□ -1.12
SNRNP40-201ENST00000263694 FAM185AQ8N0U4 392 aa8.04□□□□□ -1.12
SNRNP40-201ENST00000263694 OR5AP2Q8NGF4 316 aa8.04□□□□□ -1.12
SNRNP40-201ENST00000263694 OR51S1Q8NGJ8 323 aa8.04□□□□□ -1.12
SNRNP40-201ENST00000263694 OR5H2Q8NGV7 314 aa8.04□□□□□ -1.12
SNRNP40-201ENST00000263694 IL1F10Q8WWZ1 152 aa8.04□□□□□ -1.12
SNRNP40-201ENST00000263694 ARL11Q969Q4 196 aa8.04□□□□□ -1.12
SNRNP40-201ENST00000263694 PALMDQ9NP74 551 aa8.04□□□□□ -1.12
SNRNP40-201ENST00000263694 TAS2R8Q9NYW2 309 aa8.04□□□□□ -1.12
SNRNP40-201ENST00000263694 EHFQ9NZC4 300 aa8.04□□□□□ -1.12
SNRNP40-201ENST00000263694 CLN8Q9UBY8 286 aa8.04□□□□□ -1.12
SNRNP40-201ENST00000263694 C22orf46C9J442 243 aa8.03□□□□□ -1.12
SNRNP40-201ENST00000263694 C15orf65H3BRN8 121 aa8.03□□□□□ -1.12
SNRNP40-201ENST00000263694 MMP23AO75900 390 aa8.03□□□□□ -1.12
SNRNP40-201ENST00000263694 IGHV3-7P01780 117 aa8.03□□□□□ -1.12
SNRNP40-201ENST00000263694 CGB3P0DN86 165 aa8.03□□□□□ -1.12
SNRNP40-201ENST00000263694 CGB7P0DN87 165 aa8.03□□□□□ -1.12
SNRNP40-201ENST00000263694 NFYAP23511 347 aaPredicted RBP8.03□□□□□ -1.12
SNRNP40-201ENST00000263694 DLX1P56177 255 aa8.03□□□□□ -1.12
SNRNP40-201ENST00000263694 AP3S2P59780 193 aa8.03□□□□□ -1.12
SNRNP40-201ENST00000263694 GNB2P62879 340 aa8.03□□□□□ -1.12
SNRNP40-201ENST00000263694 LCN2P80188 198 aa8.03□□□□□ -1.12
SNRNP40-201ENST00000263694 PRB3Q04118 309 aaPredicted RBP8.03□□□□□ -1.12
SNRNP40-201ENST00000263694 DYRK1AQ13627 763 aa8.03□□□□□ -1.12
SNRNP40-201ENST00000263694 CDK10Q15131 360 aa8.03□□□□□ -1.12
SNRNP40-201ENST00000263694 HMGN3Q15651 99 aa8.03□□□□□ -1.12
SNRNP40-201ENST00000263694 C17orf58Q2M2W7 97 aa8.03□□□□□ -1.12
SNRNP40-201ENST00000263694 Q5PR19 223 aa8.03□□□□□ -1.12
SNRNP40-201ENST00000263694 ZNF782Q6ZMW2 699 aaPredicted RBP8.03□□□□□ -1.12
SNRNP40-201ENST00000263694 NLRC3Q7RTR2 1065 aa8.03□□□□□ -1.12
SNRNP40-201ENST00000263694 MAPK1IP1LQ8NDC0 245 aa8.03□□□□□ -1.12
SNRNP40-201ENST00000263694 OR52L2PQ8NGH6 319 aa8.03□□□□□ -1.12
SNRNP40-201ENST00000263694 SSBP3Q9BWW4 388 aaPredicted RBP8.03□□□□□ -1.12
SNRNP40-201ENST00000263694 KCNIP1Q9NZI2 227 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms