RNA–Protein interactions for RNA: ENST00000262213.6

TRAM1-201, Transcript of translocation associated membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAM1, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-201ENST00000262213 ZNF488Q96MN9 340 aa14.96□□□□□ -0.02
TRAM1-201ENST00000262213 A0A096LPE4 126 aa14.95□□□□□ -0.02
TRAM1-201ENST00000262213 TRAV39A0A0B4J263 110 aa14.95□□□□□ -0.02
TRAM1-201ENST00000262213 A0A1B0GV90 55 aa14.95□□□□□ -0.02
TRAM1-201ENST00000262213 A0A1W2PPZ6 126 aa14.95□□□□□ -0.02
TRAM1-201ENST00000262213 OR5H1A6NKK0 313 aa14.95□□□□□ -0.02
TRAM1-201ENST00000262213 HS3ST1O14792 307 aa14.95□□□□□ -0.02
TRAM1-201ENST00000262213 RNF224P0DH78 156 aa14.95□□□□□ -0.02
TRAM1-201ENST00000262213 SSX7Q7RTT5 188 aa14.95□□□□□ -0.02
TRAM1-201ENST00000262213 NECAP1Q8NC96 275 aa14.95□□□□□ -0.02
TRAM1-201ENST00000262213 UBALD1Q8TB05 177 aa14.95□□□□□ -0.02
TRAM1-201ENST00000262213 IL1F10Q8WWZ1 152 aa14.95□□□□□ -0.02
TRAM1-201ENST00000262213 GPR146Q96CH1 333 aa14.95□□□□□ -0.02
TRAM1-201ENST00000262213 ZNF576Q9H609 170 aa14.95□□□□□ -0.02
TRAM1-201ENST00000262213 IGHV1-45A0A0A0MS14 117 aa14.95□□□□□ -0.02
TRAM1-201ENST00000262213 TOX3O15405 576 aaPredicted RBP14.95□□□□□ -0.02
TRAM1-201ENST00000262213 METTL15P1P0C7V9 234 aa14.95□□□□□ -0.02
TRAM1-201ENST00000262213 UCP1P25874 307 aa14.95□□□□□ -0.02
TRAM1-201ENST00000262213 BAXQ07812 192 aa14.95□□□□□ -0.02
TRAM1-201ENST00000262213 CLEC12BQ2HXU8 276 aa14.95□□□□□ -0.02
TRAM1-201ENST00000262213 FAM90A2PQ658T7 463 aa14.95□□□□□ -0.02
TRAM1-201ENST00000262213 RPS19BP1Q86WX3 136 aaKnown RBP14.95□□□□□ -0.02
TRAM1-201ENST00000262213 CPT1CQ8TCG5 803 aa14.95□□□□□ -0.02
TRAM1-201ENST00000262213 ABHD3Q8WU67 409 aa14.95□□□□□ -0.02
TRAM1-201ENST00000262213 RDH5Q92781 318 aa14.95□□□□□ -0.02
TRAM1-201ENST00000262213 C14orf144Q96I85 54 aa14.95□□□□□ -0.02
TRAM1-201ENST00000262213 CEBPZOSA8MTT3 80 aa14.94□□□□□ -0.02
TRAM1-201ENST00000262213 PGLYRP1O75594 196 aaPredicted RBP14.94□□□□□ -0.02
TRAM1-201ENST00000262213 UMODP07911 640 aa14.94□□□□□ -0.02
TRAM1-201ENST00000262213 PSG2P11465 335 aa14.94□□□□□ -0.02
TRAM1-201ENST00000262213 HIST1H1BP16401 226 aaKnown RBP14.94□□□□□ -0.02
TRAM1-201ENST00000262213 ZNF16P17020 682 aaPredicted RBP14.94□□□□□ -0.02
TRAM1-201ENST00000262213 TUBG1P23258 451 aa14.94□□□□□ -0.02
TRAM1-201ENST00000262213 ELLP55199 621 aaPredicted RBP14.94□□□□□ -0.02
TRAM1-201ENST00000262213 RAC3P60763 192 aa14.94□□□□□ -0.02
TRAM1-201ENST00000262213 IL24Q13007 206 aa14.94□□□□□ -0.02
TRAM1-201ENST00000262213 PRR18Q8N4B5 295 aa14.94□□□□□ -0.02
TRAM1-201ENST00000262213 SCGB1C1Q8TD33 95 aa14.94□□□□□ -0.02
TRAM1-201ENST00000262213 RNF115Q9Y4L5 304 aa14.94□□□□□ -0.02
TRAM1-201ENST00000262213 KIAA2026Q5HYC2 2103 aa14.94□□□□□ -0.02
TRAM1-201ENST00000262213 CELSR3Q9NYQ7 3312 aa14.94□□□□□ -0.02
TRAM1-201ENST00000262213 URB1O60287 2271 aaKnown RBP14.94□□□□□ -0.02
TRAM1-201ENST00000262213 CBR3O75828 277 aa14.94□□□□□ -0.02
TRAM1-201ENST00000262213 RFPL3SP0C7P2 107 aa14.94□□□□□ -0.02
TRAM1-201ENST00000262213 PRDX4Q13162 271 aa14.94□□□□□ -0.02
TRAM1-201ENST00000262213 WIPI1Q5MNZ9 446 aaPredicted RBP14.94□□□□□ -0.02
TRAM1-201ENST00000262213 ZNF845Q96IR2 970 aaPredicted RBP14.94□□□□□ -0.02
TRAM1-201ENST00000262213 FGF23Q9GZV9 251 aaPredicted RBP14.94□□□□□ -0.02
TRAM1-201ENST00000262213 NCKAP5O14513 1909 aa14.93□□□□□ -0.02
TRAM1-201ENST00000262213 SERPINE2P07093 398 aa14.93□□□□□ -0.02
TRAM1-201ENST00000262213 COX6A1P12074 109 aa14.93□□□□□ -0.02
TRAM1-201ENST00000262213 C20orf204Q6ZNR8 217 aa14.93□□□□□ -0.02
TRAM1-201ENST00000262213 CABLES2Q9BTV7 478 aa14.93□□□□□ -0.02
TRAM1-201ENST00000262213 GPR35Q9HC97 309 aa14.93□□□□□ -0.02
TRAM1-201ENST00000262213 ZNF716A6NP11 495 aa14.93□□□□□ -0.02
TRAM1-201ENST00000262213 CLDN34H7C241 214 aa14.93□□□□□ -0.02
TRAM1-201ENST00000262213 HMGB3O15347 200 aaKnown RBP14.93□□□□□ -0.02
TRAM1-201ENST00000262213 PTBP3O95758 552 aaKnown RBP14.93□□□□□ -0.02
TRAM1-201ENST00000262213 IGFBP7Q16270 282 aa14.93□□□□□ -0.02
TRAM1-201ENST00000262213 WDR25Q64LD2 544 aaPredicted RBP14.93□□□□□ -0.02
TRAM1-201ENST00000262213 SP5Q6BEB4 398 aaPredicted RBP14.93□□□□□ -0.02
TRAM1-201ENST00000262213 Q6ZRM9 215 aa14.93□□□□□ -0.02
TRAM1-201ENST00000262213 BEND4Q6ZU67 534 aa14.93□□□□□ -0.02
TRAM1-201ENST00000262213 OR1K1Q8NGR3 316 aa14.93□□□□□ -0.02
TRAM1-201ENST00000262213 OR10D3Q8NH80 312 aa14.93□□□□□ -0.02
TRAM1-201ENST00000262213 PACRGQ96M98 296 aaPredicted RBP14.93□□□□□ -0.02
TRAM1-201ENST00000262213 SMOC1Q9H4F8 434 aa14.93□□□□□ -0.02
TRAM1-201ENST00000262213 BCL2P10415 239 aa14.92□□□□□ -0.02
TRAM1-201ENST00000262213 ZNF726P1Q15940 193 aa14.92□□□□□ -0.02
TRAM1-201ENST00000262213 ZNF295-AS1Q8N0V1 137 aa14.92□□□□□ -0.02
TRAM1-201ENST00000262213 OR51B6Q9H340 312 aa14.92□□□□□ -0.02
TRAM1-201ENST00000262213 PLK3Q9H4B4 646 aa14.92□□□□□ -0.02
TRAM1-201ENST00000262213 MTCH1Q9NZJ7 389 aa14.92□□□□□ -0.02
TRAM1-201ENST00000262213 ERRFI1Q9UJM3 462 aaPredicted RBP14.92□□□□□ -0.02
TRAM1-201ENST00000262213 NOSIPQ9Y314 301 aaKnown RBP14.92□□□□□ -0.02
TRAM1-201ENST00000262213 SYNGR1O43759 233 aa14.92□□□□□ -0.02
TRAM1-201ENST00000262213 DFFBO76075 338 aa14.92□□□□□ -0.02
TRAM1-201ENST00000262213 CNOT4O95628 575 aaKnown RBP14.92□□□□□ -0.02
TRAM1-201ENST00000262213 NAPSAO96009 420 aa14.92□□□□□ -0.02
TRAM1-201ENST00000262213 CD55P08174 381 aa14.92□□□□□ -0.02
TRAM1-201ENST00000262213 ARL16Q0P5N6 197 aa14.92□□□□□ -0.02
TRAM1-201ENST00000262213 SSX9Q7RTT3 188 aa14.92□□□□□ -0.02
TRAM1-201ENST00000262213 IMMP1LQ96LU5 166 aa14.92□□□□□ -0.02
TRAM1-201ENST00000262213 SF3B5Q9BWJ5 86 aaKnown RBP14.92□□□□□ -0.02
TRAM1-201ENST00000262213 UFSP2Q9NUQ7 469 aa14.92□□□□□ -0.02
TRAM1-201ENST00000262213 CACNG5Q9UF02 275 aa14.92□□□□□ -0.02
TRAM1-201ENST00000262213 GJE1A6NN92 205 aa14.91□□□□□ -0.02
TRAM1-201ENST00000262213 CEACAM1P13688 526 aa14.91□□□□□ -0.02
TRAM1-201ENST00000262213 COL19A1Q14993 1142 aa14.91□□□□□ -0.02
TRAM1-201ENST00000262213 ADIRFQ15847 76 aa14.91□□□□□ -0.02
TRAM1-201ENST00000262213 OR5D13Q8NGL4 314 aa14.91□□□□□ -0.02
TRAM1-201ENST00000262213 GAB2Q9UQC2 676 aa14.91□□□□□ -0.02
TRAM1-201ENST00000262213 R4GN57 208 aa14.91□□□□□ -0.02
TRAM1-201ENST00000262213 ELOA3CA0A087WX78 387 aaPredicted RBP14.91□□□□□ -0.02
TRAM1-201ENST00000262213 LY6G6EA0A0G2JKS1 128 aa14.91□□□□□ -0.02
TRAM1-201ENST00000262213 TRAPPC2LH3BP13 241 aa14.91□□□□□ -0.02
TRAM1-201ENST00000262213 F2RP25116 425 aa14.91□□□□□ -0.02
TRAM1-201ENST00000262213 B3GALT5-AS1P59052 145 aa14.91□□□□□ -0.02
TRAM1-201ENST00000262213 PCBD1P61457 104 aa14.91□□□□□ -0.02
TRAM1-201ENST00000262213 GGNQ86UU5 652 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms