RNA–Protein interactions for RNA: ENST00000261007.9

CHRNA1-201, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene CHRNA1, Length 1,980 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-201ENST00000261007 CISD1Q9NZ45 108 aaKnown RBP9.3□□□□□ -0.92
CHRNA1-201ENST00000261007 EYSQ5T1H1 3165 aa9.3□□□□□ -0.92
CHRNA1-201ENST00000261007 A0A0G2JMM0 328 aa9.3□□□□□ -0.92
CHRNA1-201ENST00000261007 A0A1W2PPB8 328 aa9.3□□□□□ -0.92
CHRNA1-201ENST00000261007 A0A1W2PRS3 328 aa9.3□□□□□ -0.92
CHRNA1-201ENST00000261007 KIR3DP1A8MWS1 328 aa9.3□□□□□ -0.92
CHRNA1-201ENST00000261007 F5H5K5 113 aa9.3□□□□□ -0.92
CHRNA1-201ENST00000261007 CXCL13O43927 109 aa9.3□□□□□ -0.92
CHRNA1-201ENST00000261007 PGA5P0DJD9 388 aa9.3□□□□□ -0.92
CHRNA1-201ENST00000261007 RAB4AP20338 218 aa9.3□□□□□ -0.92
CHRNA1-201ENST00000261007 NKX2-1P43699 371 aaPredicted RBP9.3□□□□□ -0.92
CHRNA1-201ENST00000261007 GFRA1P56159 465 aa9.3□□□□□ -0.92
CHRNA1-201ENST00000261007 WIPI1Q5MNZ9 446 aaPredicted RBP9.3□□□□□ -0.92
CHRNA1-201ENST00000261007 FAM90A2PQ658T7 463 aa9.3□□□□□ -0.92
CHRNA1-201ENST00000261007 H1FOOQ8IZA3 346 aaPredicted RBP9.3□□□□□ -0.92
CHRNA1-201ENST00000261007 ZNF664Q8N3J9 261 aa9.3□□□□□ -0.92
CHRNA1-201ENST00000261007 OR10A7Q8NGE5 316 aa9.3□□□□□ -0.92
CHRNA1-201ENST00000261007 SPSB1Q96BD6 273 aa9.3□□□□□ -0.92
CHRNA1-201ENST00000261007 REEP6Q96HR9 211 aa9.3□□□□□ -0.92
CHRNA1-201ENST00000261007 LYZL4Q96KX0 146 aa9.3□□□□□ -0.92
CHRNA1-201ENST00000261007 FER1L6-AS2Q96M78 137 aa9.3□□□□□ -0.92
CHRNA1-201ENST00000261007 P2RX4Q99571 388 aa9.3□□□□□ -0.92
CHRNA1-201ENST00000261007 HDHD3Q9BSH5 251 aaPredicted RBP9.3□□□□□ -0.92
CHRNA1-201ENST00000261007 CRLF2Q9HC73 371 aa9.3□□□□□ -0.92
CHRNA1-201ENST00000261007 DUXBA0A1W2PPF3 345 aa9.29□□□□□ -0.92
CHRNA1-201ENST00000261007 CLEC18AA5D8T8 446 aa9.29□□□□□ -0.92
CHRNA1-201ENST00000261007 CDX4O14627 284 aaPredicted RBP9.29□□□□□ -0.92
CHRNA1-201ENST00000261007 PHF1O43189 567 aaPredicted RBP9.29□□□□□ -0.92
CHRNA1-201ENST00000261007 DFFBO76075 338 aa9.29□□□□□ -0.92
CHRNA1-201ENST00000261007 CRYGSP22914 178 aa9.29□□□□□ -0.92
CHRNA1-201ENST00000261007 VAMP2P63027 116 aa9.29□□□□□ -0.92
CHRNA1-201ENST00000261007 SLC10A1Q14973 349 aa9.29□□□□□ -0.92
CHRNA1-201ENST00000261007 OR8G1Q15617 311 aa9.29□□□□□ -0.92
CHRNA1-201ENST00000261007 USF2Q15853 346 aaPredicted RBP9.29□□□□□ -0.92
CHRNA1-201ENST00000261007 PHLDA2Q53GA4 152 aa9.29□□□□□ -0.92
CHRNA1-201ENST00000261007 SLC25A26Q70HW3 274 aa9.29□□□□□ -0.92
CHRNA1-201ENST00000261007 ZNF100Q8IYN0 542 aa9.29□□□□□ -0.92
CHRNA1-201ENST00000261007 CMTM1Q8IZ96 169 aa9.29□□□□□ -0.92
CHRNA1-201ENST00000261007 SLC35G3Q8N808 338 aa9.29□□□□□ -0.92
CHRNA1-201ENST00000261007 CLEC18CQ8NCF0 446 aa9.29□□□□□ -0.92
CHRNA1-201ENST00000261007 OR2M7Q8NG81 312 aa9.29□□□□□ -0.92
CHRNA1-201ENST00000261007 OR5L1Q8NGL2 311 aa9.29□□□□□ -0.92
CHRNA1-201ENST00000261007 OR1P1Q8NH06 330 aa9.29□□□□□ -0.92
CHRNA1-201ENST00000261007 OR1F12Q8NHA8 337 aa9.29□□□□□ -0.92
CHRNA1-201ENST00000261007 TMEM171Q8WVE6 324 aa9.29□□□□□ -0.92
CHRNA1-201ENST00000261007 TMEM56Q96MV1 263 aa9.29□□□□□ -0.92
CHRNA1-201ENST00000261007 FOXB1Q99853 325 aa9.29□□□□□ -0.92
CHRNA1-201ENST00000261007 PYGO2Q9BRQ0 406 aa9.29□□□□□ -0.92
CHRNA1-201ENST00000261007 LINC00470Q9BZP3 86 aa9.29□□□□□ -0.92
CHRNA1-201ENST00000261007 METTL9Q9H1A3 318 aa9.29□□□□□ -0.92
CHRNA1-201ENST00000261007 ELL3Q9HB65 397 aaPredicted RBP9.29□□□□□ -0.92
CHRNA1-201ENST00000261007 SDF2L1Q9HCN8 221 aa9.29□□□□□ -0.92
CHRNA1-201ENST00000261007 VAX2Q9UIW0 290 aa9.29□□□□□ -0.92
CHRNA1-201ENST00000261007 SLC7A11Q9UPY5 501 aa9.29□□□□□ -0.92
CHRNA1-201ENST00000261007 TMEM56-RWDD3S4R434 201 aa9.29□□□□□ -0.92
CHRNA1-201ENST00000261007 IGKV3D-15A0A087WSY6 115 aa9.28□□□□□ -0.92
CHRNA1-201ENST00000261007 OR6C6A6NF89 314 aa9.28□□□□□ -0.92
CHRNA1-201ENST00000261007 PROB1E7EW31 1015 aa9.28□□□□□ -0.92
CHRNA1-201ENST00000261007 SYNGR3O43761 229 aa9.28□□□□□ -0.92
CHRNA1-201ENST00000261007 AMBPP02760 352 aa9.28□□□□□ -0.92
CHRNA1-201ENST00000261007 RFPL3SP0C7P2 107 aa9.28□□□□□ -0.92
CHRNA1-201ENST00000261007 SFTPCP11686 197 aa9.28□□□□□ -0.92
CHRNA1-201ENST00000261007 FUT3P21217 361 aa9.28□□□□□ -0.92
CHRNA1-201ENST00000261007 ASCL1P50553 236 aa9.28□□□□□ -0.92
CHRNA1-201ENST00000261007 TAS2R30P59541 319 aa9.28□□□□□ -0.92
CHRNA1-201ENST00000261007 IL24Q13007 206 aa9.28□□□□□ -0.92
CHRNA1-201ENST00000261007 CNN3Q15417 329 aaKnown RBP9.28□□□□□ -0.92
CHRNA1-201ENST00000261007 OR8B8Q15620 311 aa9.28□□□□□ -0.92
CHRNA1-201ENST00000261007 ACSF3Q4G176 576 aaPredicted RBP9.28□□□□□ -0.92
CHRNA1-201ENST00000261007 TSPO2Q5TGU0 170 aa9.28□□□□□ -0.92
CHRNA1-201ENST00000261007 TGIF2LYQ8IUE0 185 aa9.28□□□□□ -0.92
CHRNA1-201ENST00000261007 OR5C1Q8NGR4 320 aa9.28□□□□□ -0.92
CHRNA1-201ENST00000261007 OR4X1Q8NH49 305 aa9.28□□□□□ -0.92
CHRNA1-201ENST00000261007 ACY3Q96HD9 319 aa9.28□□□□□ -0.92
CHRNA1-201ENST00000261007 SNX22Q96L94 193 aa9.28□□□□□ -0.92
CHRNA1-201ENST00000261007 TECTBQ96PL2 329 aa9.28□□□□□ -0.92
CHRNA1-201ENST00000261007 FAAP24Q9BTP7 215 aa9.28□□□□□ -0.92
CHRNA1-201ENST00000261007 CABLES2Q9BTV7 478 aa9.28□□□□□ -0.92
CHRNA1-201ENST00000261007 CALHM2Q9HA72 323 aa9.28□□□□□ -0.92
CHRNA1-201ENST00000261007 TMEM9BQ9NQ34 198 aa9.28□□□□□ -0.92
CHRNA1-201ENST00000261007 PLSCR2Q9NRY7 297 aa9.28□□□□□ -0.92
CHRNA1-201ENST00000261007 DEPPQ9NTK1 212 aa9.28□□□□□ -0.92
CHRNA1-201ENST00000261007 FOXJ2Q9P0K8 574 aa9.28□□□□□ -0.92
CHRNA1-201ENST00000261007 WASF3Q9UPY6 502 aa9.28□□□□□ -0.92
CHRNA1-201ENST00000261007 TRIOO75962 3097 aa9.28□□□□□ -0.92
CHRNA1-201ENST00000261007 C3orf85A0A1B0GTC6 90 aa9.28□□□□□ -0.92
CHRNA1-201ENST00000261007 NKX2-6A6NCS4 301 aa9.28□□□□□ -0.92
CHRNA1-201ENST00000261007 MPPED1O15442 326 aa9.28□□□□□ -0.92
CHRNA1-201ENST00000261007 ANOS1P23352 680 aa9.28□□□□□ -0.92
CHRNA1-201ENST00000261007 PDLIM4P50479 330 aa9.28□□□□□ -0.92
CHRNA1-201ENST00000261007 DYNLT3P51808 116 aa9.28□□□□□ -0.92
CHRNA1-201ENST00000261007 FXYD4P59646 89 aa9.28□□□□□ -0.92
CHRNA1-201ENST00000261007 KRTAP27-1Q3LI81 207 aa9.28□□□□□ -0.92
CHRNA1-201ENST00000261007 DCAF10Q5QP82 559 aa9.28□□□□□ -0.92
CHRNA1-201ENST00000261007 NPRL2Q8WTW4 380 aa9.28□□□□□ -0.92
CHRNA1-201ENST00000261007 TMEM222Q9H0R3 208 aa9.28□□□□□ -0.92
CHRNA1-201ENST00000261007 ZNF703Q9H7S9 590 aaPredicted RBP9.28□□□□□ -0.92
CHRNA1-201ENST00000261007 ZNF286AQ9HBT8 521 aa9.28□□□□□ -0.92
CHRNA1-201ENST00000261007 RFNGQ9Y644 331 aa9.28□□□□□ -0.92
CHRNA1-201ENST00000261007 E9PLN8 166 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms