RNA–Protein interactions for RNA: ENST00000258733.8

GPNMB-201, Transcript of glycoprotein nmb, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GPNMB, Length 2,862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-201ENST00000258733 KIR2DS1A0A191URI9 304 aa6.68□□□□□ -1.34
GPNMB-201ENST00000258733 TNFRSF10CO14798 259 aa6.68□□□□□ -1.34
GPNMB-201ENST00000258733 C1QL1O75973 258 aa6.68□□□□□ -1.34
GPNMB-201ENST00000258733 ACTL6BO94805 426 aa6.68□□□□□ -1.34
GPNMB-201ENST00000258733 CGAP01215 116 aa6.68□□□□□ -1.34
GPNMB-201ENST00000258733 IGHA1P01876 353 aa6.68□□□□□ -1.34
GPNMB-201ENST00000258733 CXCL10P02778 98 aa6.68□□□□□ -1.34
GPNMB-201ENST00000258733 ZNF286BP0CG31 522 aa6.68□□□□□ -1.34
GPNMB-201ENST00000258733 CSRP1P21291 193 aaKnown RBP6.68□□□□□ -1.34
GPNMB-201ENST00000258733 OR1D4P47884 311 aa6.68□□□□□ -1.34
GPNMB-201ENST00000258733 GZMMP51124 257 aa6.68□□□□□ -1.34
GPNMB-201ENST00000258733 TAS2R20P59543 309 aa6.68□□□□□ -1.34
GPNMB-201ENST00000258733 FUT5Q11128 374 aa6.68□□□□□ -1.34
GPNMB-201ENST00000258733 KIR2DS1Q14954 304 aa6.68□□□□□ -1.34
GPNMB-201ENST00000258733 FAM19A5Q7Z5A7 132 aaPredicted RBP6.68□□□□□ -1.34
GPNMB-201ENST00000258733 BCDIN3DQ7Z5W3 292 aaKnown RBP6.68□□□□□ -1.34
GPNMB-201ENST00000258733 MSRB3Q8IXL7 192 aa6.68□□□□□ -1.34
GPNMB-201ENST00000258733 ZDHHC22Q8N966 263 aa6.68□□□□□ -1.34
GPNMB-201ENST00000258733 OCC1Q8TAD7 63 aa6.68□□□□□ -1.34
GPNMB-201ENST00000258733 NMNAT2Q9BZQ4 307 aa6.68□□□□□ -1.34
GPNMB-201ENST00000258733 TFCP2L1Q9NZI6 479 aa6.68□□□□□ -1.34
GPNMB-201ENST00000258733 H7C1C5 153 aa6.67□□□□□ -1.34
GPNMB-201ENST00000258733 KLK10O43240 276 aa6.67□□□□□ -1.34
GPNMB-201ENST00000258733 CLEC3AO75596 197 aa6.67□□□□□ -1.34
GPNMB-201ENST00000258733 IL2RAP01589 272 aa6.67□□□□□ -1.34
GPNMB-201ENST00000258733 NGFRP08138 427 aa6.67□□□□□ -1.34
GPNMB-201ENST00000258733 SRP19P09132 144 aaKnown RBP6.67□□□□□ -1.34
GPNMB-201ENST00000258733 OPRM1P35372 400 aa6.67□□□□□ -1.34
GPNMB-201ENST00000258733 VAMP7P51809 220 aa6.67□□□□□ -1.34
GPNMB-201ENST00000258733 PNRC1Q12796 327 aaPredicted RBP6.67□□□□□ -1.34
GPNMB-201ENST00000258733 ZNF678Q5SXM1 525 aa6.67□□□□□ -1.34
GPNMB-201ENST00000258733 TTC9CQ8N5M4 171 aa6.67□□□□□ -1.34
GPNMB-201ENST00000258733 ZNF439Q8NDP4 499 aa6.67□□□□□ -1.34
GPNMB-201ENST00000258733 OR51A4Q8NGJ6 313 aa6.67□□□□□ -1.34
GPNMB-201ENST00000258733 OR4C16Q8NGL9 310 aa6.67□□□□□ -1.34
GPNMB-201ENST00000258733 HRASLS2Q9NWW9 162 aa6.67□□□□□ -1.34
GPNMB-201ENST00000258733 KLHDC2Q9Y2U9 406 aa6.67□□□□□ -1.34
GPNMB-201ENST00000258733 C15orf65H3BRN8 121 aa6.67□□□□□ -1.34
GPNMB-201ENST00000258733 LILRA1O75019 489 aa6.67□□□□□ -1.34
GPNMB-201ENST00000258733 PFN1P07737 140 aaKnown RBP6.67□□□□□ -1.34
GPNMB-201ENST00000258733 ALOX5APP20292 161 aa6.67□□□□□ -1.34
GPNMB-201ENST00000258733 CCR2P41597 374 aa6.67□□□□□ -1.34
GPNMB-201ENST00000258733 KRTDAPP60985 99 aa6.67□□□□□ -1.34
GPNMB-201ENST00000258733 LIN28BQ6ZN17 250 aaKnown RBP eCLIP6.67□□□□□ -1.34
GPNMB-201ENST00000258733 CMTM4Q8IZR5 234 aa6.67□□□□□ -1.34
GPNMB-201ENST00000258733 POC1AQ8NBT0 407 aa6.67□□□□□ -1.34
GPNMB-201ENST00000258733 OR5AN1Q8NGI8 311 aa6.67□□□□□ -1.34
GPNMB-201ENST00000258733 OR10G6Q8NH81 332 aa6.67□□□□□ -1.34
GPNMB-201ENST00000258733 PTPMT1Q8WUK0 201 aaPredicted RBP6.67□□□□□ -1.34
GPNMB-201ENST00000258733 DDB2Q92466 427 aa6.67□□□□□ -1.34
GPNMB-201ENST00000258733 AQP10Q96PS8 301 aa6.67□□□□□ -1.34
GPNMB-201ENST00000258733 SPIN2AQ99865 258 aa6.67□□□□□ -1.34
GPNMB-201ENST00000258733 SPIN2BQ9BPZ2 258 aa6.67□□□□□ -1.34
GPNMB-201ENST00000258733 RNF126Q9BV68 326 aa6.67□□□□□ -1.34
GPNMB-201ENST00000258733 ARL15Q9NXU5 204 aa6.67□□□□□ -1.34
GPNMB-201ENST00000258733 V9GYY9 64 aa6.67□□□□□ -1.34
GPNMB-201ENST00000258733 IRGMA1A4Y4 181 aa6.67□□□□□ -1.34
GPNMB-201ENST00000258733 CLDN5O00501 218 aa6.67□□□□□ -1.34
GPNMB-201ENST00000258733 DANCRP0C864 163 aa6.67□□□□□ -1.34
GPNMB-201ENST00000258733 ZNF17P17021 662 aa6.67□□□□□ -1.34
GPNMB-201ENST00000258733 HIST1H1TP22492 207 aaPredicted RBP6.67□□□□□ -1.34
GPNMB-201ENST00000258733 PAFAH1B3Q15102 231 aaKnown RBP6.67□□□□□ -1.34
GPNMB-201ENST00000258733 CBLL1Q75N03 491 aa6.67□□□□□ -1.34
GPNMB-201ENST00000258733 COMMD6Q7Z4G1 85 aa6.67□□□□□ -1.34
GPNMB-201ENST00000258733 OOSP2Q86WS3 158 aa6.67□□□□□ -1.34
GPNMB-201ENST00000258733 C10orf111Q8N326 155 aa6.67□□□□□ -1.34
GPNMB-201ENST00000258733 CRYGNQ8WXF5 182 aa6.67□□□□□ -1.34
GPNMB-201ENST00000258733 JMJD8Q96S16 334 aa6.67□□□□□ -1.34
GPNMB-201ENST00000258733 NUDT22Q9BRQ3 303 aa6.67□□□□□ -1.34
GPNMB-201ENST00000258733 NRN1Q9NPD7 142 aa6.67□□□□□ -1.34
GPNMB-201ENST00000258733 PIGLQ9Y2B2 252 aa6.67□□□□□ -1.34
GPNMB-201ENST00000258733 LSM5Q9Y4Y9 91 aaKnown RBP6.67□□□□□ -1.34
GPNMB-201ENST00000258733 RBFOX3A6NFN3 312 aa6.66□□□□□ -1.34
GPNMB-201ENST00000258733 FAM90A27PA6NNH2 459 aa6.66□□□□□ -1.34
GPNMB-201ENST00000258733 VWC2LB2RUY7 222 aa6.66□□□□□ -1.34
GPNMB-201ENST00000258733 ZNF561-AS1K7EIQ3 104 aa6.66□□□□□ -1.34
GPNMB-201ENST00000258733 OR7C1O76099 320 aaPredicted RBP6.66□□□□□ -1.34
GPNMB-201ENST00000258733 LIMS3P0CW19 117 aa6.66□□□□□ -1.34
GPNMB-201ENST00000258733 LIMS4P0CW20 117 aa6.66□□□□□ -1.34
GPNMB-201ENST00000258733 KIR2DL1P43626 348 aaPredicted RBP6.66□□□□□ -1.34
GPNMB-201ENST00000258733 DUX4L9Q6RFH8 374 aaPredicted RBP6.66□□□□□ -1.34
GPNMB-201ENST00000258733 ZNF547Q8IVP9 402 aa6.66□□□□□ -1.34
GPNMB-201ENST00000258733 CYB561D1Q8N8Q1 229 aa6.66□□□□□ -1.34
GPNMB-201ENST00000258733 PLPPR1Q8TBJ4 325 aa6.66□□□□□ -1.34
GPNMB-201ENST00000258733 ZNRF4Q8WWF5 429 aa6.66□□□□□ -1.34
GPNMB-201ENST00000258733 AQP3Q92482 292 aa6.66□□□□□ -1.34
GPNMB-201ENST00000258733 HOXB13Q92826 284 aaPredicted RBP6.66□□□□□ -1.34
GPNMB-201ENST00000258733 MBD6Q96DN6 1003 aa6.66□□□□□ -1.34
GPNMB-201ENST00000258733 ZMYND19Q96E35 227 aaPredicted RBP6.66□□□□□ -1.34
GPNMB-201ENST00000258733 LRRC3BQ96PB8 259 aa6.66□□□□□ -1.34
GPNMB-201ENST00000258733 GPR21Q99679 349 aa6.66□□□□□ -1.34
GPNMB-201ENST00000258733 COA1Q9GZY4 146 aa6.66□□□□□ -1.34
GPNMB-201ENST00000258733 FGF20Q9NP95 211 aaPredicted RBP6.66□□□□□ -1.34
GPNMB-201ENST00000258733 COL2A1P02458 1487 aaPredicted RBP6.66□□□□□ -1.34
GPNMB-201ENST00000258733 TRAV36DV7A0A075B6V5 113 aa6.66□□□□□ -1.34
GPNMB-201ENST00000258733 EEF1E1-BLOC1S5C9J1V9 151 aa6.66□□□□□ -1.34
GPNMB-201ENST00000258733 ZNF217O75362 1048 aa6.66□□□□□ -1.34
GPNMB-201ENST00000258733 PF4P02776 101 aa6.66□□□□□ -1.34
GPNMB-201ENST00000258733 GAPDHP04406 335 aaKnown RBP6.66□□□□□ -1.34
GPNMB-201ENST00000258733 CYBAP13498 195 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms