RNA–Protein interactions for RNA: ENST00000258607.9

CKAP2-201, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CKAP2, Length 3,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-201ENST00000258607 ZNF169Q14929 603 aaPredicted RBP7.74□□□□□ -1.17
CKAP2-201ENST00000258607 ZNF528Q3MIS6 628 aa7.74□□□□□ -1.17
CKAP2-201ENST00000258607 SPANXN5Q5MJ07 72 aa7.74□□□□□ -1.17
CKAP2-201ENST00000258607 H3F3CQ6NXT2 135 aa7.74□□□□□ -1.17
CKAP2-201ENST00000258607 JMJD6Q6NYC1 403 aaPredicted RBP7.74□□□□□ -1.17
CKAP2-201ENST00000258607 LYPD6Q86Y78 171 aa7.74□□□□□ -1.17
CKAP2-201ENST00000258607 SPICQ8N5J4 248 aa7.74□□□□□ -1.17
CKAP2-201ENST00000258607 H1FXQ92522 213 aaKnown RBP7.74□□□□□ -1.17
CKAP2-201ENST00000258607 NEUROG1Q92886 237 aa7.74□□□□□ -1.17
CKAP2-201ENST00000258607 MUCL1Q96DR8 90 aa7.74□□□□□ -1.17
CKAP2-201ENST00000258607 CMTM3Q96MX0 182 aa7.74□□□□□ -1.17
CKAP2-201ENST00000258607 OCSTAMPQ9BR26 566 aa7.74□□□□□ -1.17
CKAP2-201ENST00000258607 COL25A1Q9BXS0 654 aaPredicted RBP7.74□□□□□ -1.17
CKAP2-201ENST00000258607 PSG11Q9UQ72 335 aa7.74□□□□□ -1.17
CKAP2-201ENST00000258607 F8W036 122 aa7.73□□□□□ -1.17
CKAP2-201ENST00000258607 CYB5R3P00387 301 aaPredicted RBP7.73□□□□□ -1.17
CKAP2-201ENST00000258607 METTL15P1P0C7V9 234 aa7.73□□□□□ -1.17
CKAP2-201ENST00000258607 NDUFB7P17568 137 aa7.73□□□□□ -1.17
CKAP2-201ENST00000258607 FPR2P25090 351 aa7.73□□□□□ -1.17
CKAP2-201ENST00000258607 BLOC1S1P78537 153 aa7.73□□□□□ -1.17
CKAP2-201ENST00000258607 DPPA2Q7Z7J5 298 aa7.73□□□□□ -1.17
CKAP2-201ENST00000258607 ARRDC1Q8N5I2 433 aa7.73□□□□□ -1.17
CKAP2-201ENST00000258607 PXT1Q8NFP0 134 aa7.73□□□□□ -1.17
CKAP2-201ENST00000258607 ARL11Q969Q4 196 aa7.73□□□□□ -1.17
CKAP2-201ENST00000258607 ITPR1Q14643 2758 aa7.73□□□□□ -1.17
CKAP2-201ENST00000258607 OR13C7P0DN81 318 aa7.73□□□□□ -1.17
CKAP2-201ENST00000258607 ZNF133P52736 654 aaPredicted RBP7.73□□□□□ -1.17
CKAP2-201ENST00000258607 OR2B8PP59922 312 aa7.73□□□□□ -1.17
CKAP2-201ENST00000258607 LY6DQ14210 128 aa7.73□□□□□ -1.17
CKAP2-201ENST00000258607 KCNMB1Q16558 191 aa7.73□□□□□ -1.17
CKAP2-201ENST00000258607 UTF1Q5T230 341 aa7.73□□□□□ -1.17
CKAP2-201ENST00000258607 ACOT7LQ6ZUV0 252 aa7.73□□□□□ -1.17
CKAP2-201ENST00000258607 NINJ1Q92982 152 aa7.73□□□□□ -1.17
CKAP2-201ENST00000258607 ARPC5LQ9BPX5 153 aa7.73□□□□□ -1.17
CKAP2-201ENST00000258607 USB1Q9BQ65 265 aaKnown RBP7.73□□□□□ -1.17
CKAP2-201ENST00000258607 OR2D2Q9H210 308 aa7.73□□□□□ -1.17
CKAP2-201ENST00000258607 TMEM100Q9NV29 134 aa7.73□□□□□ -1.17
CKAP2-201ENST00000258607 RAXQ9Y2V3 346 aa7.73□□□□□ -1.17
CKAP2-201ENST00000258607 SMPD2O60906 423 aa7.73□□□□□ -1.17
CKAP2-201ENST00000258607 OR2A4O95047 310 aa7.73□□□□□ -1.17
CKAP2-201ENST00000258607 HERPUD1Q15011 391 aa7.73□□□□□ -1.17
CKAP2-201ENST00000258607 CEACAM21Q3KPI0 293 aa7.73□□□□□ -1.17
CKAP2-201ENST00000258607 RIPPLY2Q5TAB7 128 aa7.73□□□□□ -1.17
CKAP2-201ENST00000258607 SLC51BQ86UW2 128 aa7.73□□□□□ -1.17
CKAP2-201ENST00000258607 RND1Q92730 232 aa7.73□□□□□ -1.17
CKAP2-201ENST00000258607 BCL2L2Q92843 193 aaPredicted RBP7.73□□□□□ -1.17
CKAP2-201ENST00000258607 OR2A7Q96R45 310 aa7.73□□□□□ -1.17
CKAP2-201ENST00000258607 RNF126Q9BV68 326 aa7.73□□□□□ -1.17
CKAP2-201ENST00000258607 TRAV24A0A0B4J272 114 aa7.72□□□□□ -1.17
CKAP2-201ENST00000258607 M0R036 132 aa7.72□□□□□ -1.17
CKAP2-201ENST00000258607 PTBP3O95758 552 aaKnown RBP7.72□□□□□ -1.17
CKAP2-201ENST00000258607 CRYAAP02489 173 aa7.72□□□□□ -1.17
CKAP2-201ENST00000258607 MBPP02686 304 aaPredicted RBP7.72□□□□□ -1.17
CKAP2-201ENST00000258607 FGF8P55075 233 aaPredicted RBP7.72□□□□□ -1.17
CKAP2-201ENST00000258607 RAG2P55895 527 aa7.72□□□□□ -1.17
CKAP2-201ENST00000258607 NKX6-1P78426 367 aaPredicted RBP7.72□□□□□ -1.17
CKAP2-201ENST00000258607 HAGHQ16775 308 aa7.72□□□□□ -1.17
CKAP2-201ENST00000258607 Q3ZCU0 254 aa7.72□□□□□ -1.17
CKAP2-201ENST00000258607 ACSF3Q4G176 576 aaPredicted RBP7.72□□□□□ -1.17
CKAP2-201ENST00000258607 CBLN2Q8IUK8 224 aa7.72□□□□□ -1.17
CKAP2-201ENST00000258607 GLYATL2Q8WU03 294 aa7.72□□□□□ -1.17
CKAP2-201ENST00000258607 LOXL4Q96JB6 756 aa7.72□□□□□ -1.17
CKAP2-201ENST00000258607 C1QTNF5Q9BXJ0 243 aa7.72□□□□□ -1.17
CKAP2-201ENST00000258607 GFOD1Q9NXC2 390 aa7.72□□□□□ -1.17
CKAP2-201ENST00000258607 CELSR2Q9HCU4 2923 aa7.72□□□□□ -1.17
CKAP2-201ENST00000258607 JMJD1CQ15652 2540 aa7.72□□□□□ -1.17
CKAP2-201ENST00000258607 C3orf85A0A1B0GTC6 90 aa7.72□□□□□ -1.17
CKAP2-201ENST00000258607 ABCD4O14678 606 aa7.72□□□□□ -1.17
CKAP2-201ENST00000258607 HEXAP06865 529 aa7.72□□□□□ -1.17
CKAP2-201ENST00000258607 FBP1P09467 338 aa7.72□□□□□ -1.17
CKAP2-201ENST00000258607 G6PCP35575 357 aa7.72□□□□□ -1.17
CKAP2-201ENST00000258607 Q6ZRG5 221 aa7.72□□□□□ -1.17
CKAP2-201ENST00000258607 ZNF573Q86YE8 665 aa7.72□□□□□ -1.17
CKAP2-201ENST00000258607 BPIFCQ8NFQ6 507 aa7.72□□□□□ -1.17
CKAP2-201ENST00000258607 C2CD4CQ8TF44 421 aa7.72□□□□□ -1.17
CKAP2-201ENST00000258607 SCARB1Q8WTV0 552 aa7.72□□□□□ -1.17
CKAP2-201ENST00000258607 TCTEX1D2Q8WW35 142 aa7.72□□□□□ -1.17
CKAP2-201ENST00000258607 RTL8AQ9BWD3 113 aa7.72□□□□□ -1.17
CKAP2-201ENST00000258607 TNFSF18Q9UNG2 199 aa7.72□□□□□ -1.17
CKAP2-201ENST00000258607 OSGIN2Q9Y236 505 aa7.72□□□□□ -1.17
CKAP2-201ENST00000258607 BSNQ9UPA5 3926 aa7.72□□□□□ -1.17
CKAP2-201ENST00000258607 SORL1Q92673 2214 aa7.72□□□□□ -1.17
CKAP2-201ENST00000258607 TNRC6BQ9UPQ9 1833 aaKnown RBP7.71□□□□□ -1.17
CKAP2-201ENST00000258607 IGKV1-6A0A0C4DH72 117 aa7.71□□□□□ -1.17
CKAP2-201ENST00000258607 MKRN2OSH3BPM6 223 aa7.71□□□□□ -1.17
CKAP2-201ENST00000258607 ACTL6AO96019 429 aa7.71□□□□□ -1.17
CKAP2-201ENST00000258607 CCL1P22362 96 aa7.71□□□□□ -1.17
CKAP2-201ENST00000258607 CAMLGP49069 296 aa7.71□□□□□ -1.17
CKAP2-201ENST00000258607 CMTM1Q8IZ96 169 aa7.71□□□□□ -1.17
CKAP2-201ENST00000258607 OR6K3Q8NGY3 331 aa7.71□□□□□ -1.17
CKAP2-201ENST00000258607 LINC01560Q8TB33 94 aa7.71□□□□□ -1.17
CKAP2-201ENST00000258607 OR2V2Q96R30 315 aa7.71□□□□□ -1.17
CKAP2-201ENST00000258607 RNF122Q9H9V4 155 aa7.71□□□□□ -1.17
CKAP2-201ENST00000258607 CACNG5Q9UF02 275 aa7.71□□□□□ -1.17
CKAP2-201ENST00000258607 URGCP-MRPS24S4R325 110 aa7.71□□□□□ -1.17
CKAP2-201ENST00000258607 MLNRO43193 412 aa7.71□□□□□ -1.18
CKAP2-201ENST00000258607 CLDN1O95832 211 aa7.71□□□□□ -1.18
CKAP2-201ENST00000258607 PMELP40967 661 aa7.71□□□□□ -1.18
CKAP2-201ENST00000258607 FGL1Q08830 312 aa7.71□□□□□ -1.18
CKAP2-201ENST00000258607 GUCA2BQ16661 112 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms