RNA–Protein interactions for RNA: ENST00000254667.7

PTPRE-201, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRE, Length 5,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-201ENST00000254667 MRPL24Q96A35 216 aaKnown RBP16.51■□□□□ 0.23
PTPRE-201ENST00000254667 MRPS18BQ9Y676 258 aaKnown RBP16.51■□□□□ 0.23
PTPRE-201ENST00000254667 FAM90A10PA6NDY2 464 aa16.51■□□□□ 0.23
PTPRE-201ENST00000254667 FAM90A18PA6NE21 464 aa16.51■□□□□ 0.23
PTPRE-201ENST00000254667 FAM90A16PA6NEW6 464 aa16.51■□□□□ 0.23
PTPRE-201ENST00000254667 FAM90A20PA6NIJ5 464 aa16.51■□□□□ 0.23
PTPRE-201ENST00000254667 FAM90A8PA6NJQ4 464 aa16.51■□□□□ 0.23
PTPRE-201ENST00000254667 FAM90A7PA6NKC0 464 aa16.51■□□□□ 0.23
PTPRE-201ENST00000254667 FAM90A22PA8MWA6 464 aa16.51■□□□□ 0.23
PTPRE-201ENST00000254667 FAM90A12PA8MX19 464 aa16.51■□□□□ 0.23
PTPRE-201ENST00000254667 FAM90A5PA8MXJ8 464 aa16.51■□□□□ 0.23
PTPRE-201ENST00000254667 FAM90A23PA8MXZ1 464 aa16.51■□□□□ 0.23
PTPRE-201ENST00000254667 FAM90A15PP0C7V4 464 aa16.51■□□□□ 0.23
PTPRE-201ENST00000254667 FAM90A13PP0C7W8 464 aa16.51■□□□□ 0.23
PTPRE-201ENST00000254667 FAM90A14PP0C7W9 464 aa16.51■□□□□ 0.23
PTPRE-201ENST00000254667 FAM90A24PP0C7X0 464 aa16.51■□□□□ 0.23
PTPRE-201ENST00000254667 RANP62826 216 aaKnown RBP16.51■□□□□ 0.23
PTPRE-201ENST00000254667 DOK5Q9P104 306 aa16.51■□□□□ 0.23
PTPRE-201ENST00000254667 A0A1W2PQM1 296 aa16.51■□□□□ 0.23
PTPRE-201ENST00000254667 A0A1W2PRD5 423 aa16.51■□□□□ 0.23
PTPRE-201ENST00000254667 A0A1W2PRF3 423 aa16.51■□□□□ 0.23
PTPRE-201ENST00000254667 A0A1W2PRM7 423 aa16.51■□□□□ 0.23
PTPRE-201ENST00000254667 ISG15P05161 165 aa16.51■□□□□ 0.23
PTPRE-201ENST00000254667 FGF12P61328 243 aa16.51■□□□□ 0.23
PTPRE-201ENST00000254667 RPL31P62899 125 aaKnown RBP16.51■□□□□ 0.23
PTPRE-201ENST00000254667 SEZ6L2Q6UXD5 910 aa16.51■□□□□ 0.23
PTPRE-201ENST00000254667 HSD17B13Q7Z5P4 300 aaPredicted RBP16.51■□□□□ 0.23
PTPRE-201ENST00000254667 OR1B1Q8NGR6 318 aa16.51■□□□□ 0.23
PTPRE-201ENST00000254667 OR1L8Q8NGR8 309 aa16.51■□□□□ 0.23
PTPRE-201ENST00000254667 ST6GAL2Q96JF0 529 aa16.51■□□□□ 0.23
PTPRE-201ENST00000254667 CSRP3P50461 194 aa16.5■□□□□ 0.23
PTPRE-201ENST00000254667 ZNF788Q6ZQV5 615 aa16.5■□□□□ 0.23
PTPRE-201ENST00000254667 IGLV1-36A0A0B4J1U3 117 aa16.5■□□□□ 0.23
PTPRE-201ENST00000254667 RBFOX3A6NFN3 312 aa16.5■□□□□ 0.23
PTPRE-201ENST00000254667 MIA3Q5JRA6 1907 aa16.5■□□□□ 0.23
PTPRE-201ENST00000254667 PARP14Q460N5 1801 aa16.5■□□□□ 0.23
PTPRE-201ENST00000254667 PLA2G10O15496 165 aa16.5■□□□□ 0.23
PTPRE-201ENST00000254667 GPR6P46095 362 aaPredicted RBP16.5■□□□□ 0.23
PTPRE-201ENST00000254667 AESQ08117 197 aa16.5■□□□□ 0.23
PTPRE-201ENST00000254667 CEBPEQ15744 281 aa16.5■□□□□ 0.23
PTPRE-201ENST00000254667 OR10A7Q8NGE5 316 aa16.5■□□□□ 0.23
PTPRE-201ENST00000254667 OR1L1Q8NH94 360 aa16.5■□□□□ 0.23
PTPRE-201ENST00000254667 XIRP1Q702N8 1843 aaKnown RBP16.5■□□□□ 0.23
PTPRE-201ENST00000254667 GCM2O75603 506 aaPredicted RBP16.5■□□□□ 0.23
PTPRE-201ENST00000254667 FCER1GP30273 86 aa16.5■□□□□ 0.23
PTPRE-201ENST00000254667 EFNB2P52799 333 aa16.5■□□□□ 0.23
PTPRE-201ENST00000254667 COL10A1Q03692 680 aa16.5■□□□□ 0.23
PTPRE-201ENST00000254667 PRSS53Q2L4Q9 553 aa16.5■□□□□ 0.23
PTPRE-201ENST00000254667 DHRS7BQ6IAN0 325 aaPredicted RBP16.5■□□□□ 0.23
PTPRE-201ENST00000254667 WDR73Q6P4I2 378 aa16.5■□□□□ 0.23
PTPRE-201ENST00000254667 MRGPRFQ96AM1 343 aa16.5■□□□□ 0.23
PTPRE-201ENST00000254667 NAT8BQ9UHF3 227 aa16.5■□□□□ 0.23
PTPRE-201ENST00000254667 ZNF205O95201 554 aa16.49■□□□□ 0.23
PTPRE-201ENST00000254667 C1QCP02747 245 aa16.49■□□□□ 0.23
PTPRE-201ENST00000254667 SPINK2P20155 84 aa16.49■□□□□ 0.23
PTPRE-201ENST00000254667 ACP1P24666 158 aa16.49■□□□□ 0.23
PTPRE-201ENST00000254667 RPEL1Q2QD12 228 aa16.49■□□□□ 0.23
PTPRE-201ENST00000254667 VAX1Q5SQQ9 334 aa16.49■□□□□ 0.23
PTPRE-201ENST00000254667 MYO16Q9Y6X6 1858 aa16.49■□□□□ 0.23
PTPRE-201ENST00000254667 SPCS3P61009 180 aa16.49■□□□□ 0.23
PTPRE-201ENST00000254667 PCOLCEQ15113 449 aa16.49■□□□□ 0.23
PTPRE-201ENST00000254667 ZNF66Q6ZN08 573 aa16.49■□□□□ 0.23
PTPRE-201ENST00000254667 SSX7Q7RTT5 188 aa16.49■□□□□ 0.23
PTPRE-201ENST00000254667 STXBP6Q8NFX7 210 aa16.49■□□□□ 0.23
PTPRE-201ENST00000254667 ZNF596Q8TC21 504 aa16.49■□□□□ 0.23
PTPRE-201ENST00000254667 Q8WTZ3 238 aa16.49■□□□□ 0.23
PTPRE-201ENST00000254667 SEMA7AO75326 666 aa16.49■□□□□ 0.23
PTPRE-201ENST00000254667 FCGR3AP08637 254 aa16.49■□□□□ 0.23
PTPRE-201ENST00000254667 LURAP1Q96LR2 239 aa16.49■□□□□ 0.23
PTPRE-201ENST00000254667 OPN3Q9H1Y3 402 aaPredicted RBP16.49■□□□□ 0.23
PTPRE-201ENST00000254667 SIRT4Q9Y6E7 314 aaPredicted RBP16.49■□□□□ 0.23
PTPRE-201ENST00000254667 CTSSP25774 331 aa16.49■□□□□ 0.23
PTPRE-201ENST00000254667 NAT8Q9UHE5 227 aa16.49■□□□□ 0.23
PTPRE-201ENST00000254667 C4orf51C9J302 202 aa16.49■□□□□ 0.23
PTPRE-201ENST00000254667 RAB29O14966 203 aa16.49■□□□□ 0.23
PTPRE-201ENST00000254667 HPXP02790 462 aa16.49■□□□□ 0.23
PTPRE-201ENST00000254667 ZNF883P0CG24 379 aa16.49■□□□□ 0.23
PTPRE-201ENST00000254667 ERVFRD-1P60508 538 aa16.49■□□□□ 0.23
PTPRE-201ENST00000254667 GCSAMQ8N6F7 178 aa16.49■□□□□ 0.23
PTPRE-201ENST00000254667 COX5BP10606 129 aa16.48■□□□□ 0.23
PTPRE-201ENST00000254667 DAOP14920 347 aa16.48■□□□□ 0.23
PTPRE-201ENST00000254667 ZNF79Q15937 498 aa16.48■□□□□ 0.23
PTPRE-201ENST00000254667 IGHV3OR15-7A0A075B7D8 119 aa16.48■□□□□ 0.23
PTPRE-201ENST00000254667 LOC102723971A0A1B0GUV8 181 aa16.48■□□□□ 0.23
PTPRE-201ENST00000254667 NKX2-6A6NCS4 301 aa16.48■□□□□ 0.23
PTPRE-201ENST00000254667 DHRS7CA6NNS2 312 aa16.48■□□□□ 0.23
PTPRE-201ENST00000254667 KRTDAPP60985 99 aa16.48■□□□□ 0.23
PTPRE-201ENST00000254667 EWSR1Q01844 656 aaKnown RBP eCLIP16.48■□□□□ 0.23
PTPRE-201ENST00000254667 ZNF154Q13106 437 aa16.48■□□□□ 0.23
PTPRE-201ENST00000254667 COX19Q49B96 90 aa16.48■□□□□ 0.23
PTPRE-201ENST00000254667 SPNS3Q6ZMD2 512 aa16.48■□□□□ 0.23
PTPRE-201ENST00000254667 SCN10AQ9Y5Y9 1956 aa16.48■□□□□ 0.23
PTPRE-201ENST00000254667 TCTEX1D1Q8N7M0 179 aa16.47■□□□□ 0.23
PTPRE-201ENST00000254667 OR1K1Q8NGR3 316 aa16.47■□□□□ 0.23
PTPRE-201ENST00000254667 PRR13Q9NZ81 148 aa16.47■□□□□ 0.23
PTPRE-201ENST00000254667 GYPAP02724 150 aa16.47■□□□□ 0.23
PTPRE-201ENST00000254667 NPY1RP25929 384 aa16.47■□□□□ 0.23
PTPRE-201ENST00000254667 TMEM50BP56557 158 aa16.47■□□□□ 0.23
PTPRE-201ENST00000254667 LYZL2Q7Z4W2 148 aa16.47■□□□□ 0.23
PTPRE-201ENST00000254667 PERPQ96FX8 193 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms