RNA–Protein interactions for RNA: ENST00000254630.11

PTCD3-201, Transcript of pentatricopeptide repeat domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD3, Length 6,734 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-201ENST00000254630 VDAC1P21796 283 aa7.6□□□□□ -1.19
PTCD3-201ENST00000254630 UCP2P55851 309 aa7.6□□□□□ -1.19
PTCD3-201ENST00000254630 HIST1H3AP68431 136 aa7.6□□□□□ -1.19
PTCD3-201ENST00000254630 TMEM251Q8N6I4 163 aa7.6□□□□□ -1.19
PTCD3-201ENST00000254630 PRSS50Q9UI38 385 aa7.6□□□□□ -1.19
PTCD3-201ENST00000254630 IGKV1-8A0A0C4DH67 115 aa7.6□□□□□ -1.19
PTCD3-201ENST00000254630 CENPVL1A0A0U1RR11 272 aa7.6□□□□□ -1.19
PTCD3-201ENST00000254630 RBFOX3A6NFN3 312 aa7.6□□□□□ -1.19
PTCD3-201ENST00000254630 HPXP02790 462 aa7.6□□□□□ -1.19
PTCD3-201ENST00000254630 HIST1H1EP10412 219 aaKnown RBP7.6□□□□□ -1.19
PTCD3-201ENST00000254630 TMEM33P57088 247 aa7.6□□□□□ -1.19
PTCD3-201ENST00000254630 SAP25Q8TEE9 199 aa7.6□□□□□ -1.19
PTCD3-201ENST00000254630 P2RX4Q99571 388 aa7.6□□□□□ -1.19
PTCD3-201ENST00000254630 CCL19Q99731 98 aa7.6□□□□□ -1.19
PTCD3-201ENST00000254630 A0A1W2PNV4 684 aa7.59□□□□□ -1.19
PTCD3-201ENST00000254630 A0A1W2PPE3 182 aa7.59□□□□□ -1.19
PTCD3-201ENST00000254630 FCN1O00602 326 aa7.59□□□□□ -1.19
PTCD3-201ENST00000254630 ASAH2BP0C7U1 165 aa7.59□□□□□ -1.19
PTCD3-201ENST00000254630 SLC6A1P30531 599 aa7.59□□□□□ -1.19
PTCD3-201ENST00000254630 ERVS71-1P61550 626 aa7.59□□□□□ -1.19
PTCD3-201ENST00000254630 CEACAM21Q3KPI0 293 aa7.59□□□□□ -1.19
PTCD3-201ENST00000254630 PHYHIPLQ96FC7 376 aa7.59□□□□□ -1.19
PTCD3-201ENST00000254630 TMUB1Q9BVT8 246 aa7.59□□□□□ -1.19
PTCD3-201ENST00000254630 AHRRA9YTQ3 701 aa7.59□□□□□ -1.19
PTCD3-201ENST00000254630 SRSF10O75494 262 aaKnown RBP7.59□□□□□ -1.19
PTCD3-201ENST00000254630 HSBP1O75506 76 aa7.59□□□□□ -1.19
PTCD3-201ENST00000254630 OR5AL1P0C617 328 aa7.59□□□□□ -1.19
PTCD3-201ENST00000254630 ERGP11308 486 aa7.59□□□□□ -1.19
PTCD3-201ENST00000254630 FABP4P15090 132 aa7.59□□□□□ -1.19
PTCD3-201ENST00000254630 REG1BP48304 166 aa7.59□□□□□ -1.19
PTCD3-201ENST00000254630 HNRNPA3P51991 378 aaKnown RBP7.59□□□□□ -1.19
PTCD3-201ENST00000254630 FAM219AQ8IW50 185 aa7.59□□□□□ -1.19
PTCD3-201ENST00000254630 CLRN3Q8NCR9 226 aa7.59□□□□□ -1.19
PTCD3-201ENST00000254630 ZNF488Q96MN9 340 aa7.59□□□□□ -1.19
PTCD3-201ENST00000254630 GHITMQ9H3K2 345 aa7.59□□□□□ -1.19
PTCD3-201ENST00000254630 HIGD1AQ9Y241 93 aa7.59□□□□□ -1.19
PTCD3-201ENST00000254630 IGSF23A1L1A6 192 aa7.59□□□□□ -1.19
PTCD3-201ENST00000254630 HMSDA8MTL9 139 aa7.59□□□□□ -1.19
PTCD3-201ENST00000254630 COX6A1P12074 109 aa7.59□□□□□ -1.19
PTCD3-201ENST00000254630 KIR3DL2P43630 455 aa7.59□□□□□ -1.19
PTCD3-201ENST00000254630 SPCS3P61009 180 aa7.59□□□□□ -1.19
PTCD3-201ENST00000254630 PSG4Q00888 419 aa7.59□□□□□ -1.19
PTCD3-201ENST00000254630 EIF4EBP2Q13542 120 aaPredicted RBP7.59□□□□□ -1.19
PTCD3-201ENST00000254630 MRGPRFQ96AM1 343 aa7.59□□□□□ -1.19
PTCD3-201ENST00000254630 A0A1B0GU03 582 aa7.59□□□□□ -1.19
PTCD3-201ENST00000254630 ADAP1O75689 374 aa7.59□□□□□ -1.19
PTCD3-201ENST00000254630 NQO2P16083 231 aa7.59□□□□□ -1.19
PTCD3-201ENST00000254630 GZMMP51124 257 aa7.59□□□□□ -1.19
PTCD3-201ENST00000254630 GFRA1P56159 465 aa7.59□□□□□ -1.19
PTCD3-201ENST00000254630 INPP5JQ15735 1006 aaPredicted RBP7.59□□□□□ -1.19
PTCD3-201ENST00000254630 ZNF645Q8N7E2 425 aa7.59□□□□□ -1.19
PTCD3-201ENST00000254630 C5orf17Q8NAS9 161 aa7.59□□□□□ -1.19
PTCD3-201ENST00000254630 CYB5R1Q9UHQ9 305 aa7.59□□□□□ -1.19
PTCD3-201ENST00000254630 PDCD11Q14690 1871 aaKnown RBP7.59□□□□□ -1.2
PTCD3-201ENST00000254630 C11orf94C9JXX5 98 aa7.59□□□□□ -1.2
PTCD3-201ENST00000254630 K7N7A8 449 aa7.59□□□□□ -1.2
PTCD3-201ENST00000254630 PTP4A3O75365 173 aa7.59□□□□□ -1.2
PTCD3-201ENST00000254630 CTSSP25774 331 aa7.59□□□□□ -1.2
PTCD3-201ENST00000254630 PAFAH1B2P68402 229 aa7.59□□□□□ -1.2
PTCD3-201ENST00000254630 GCSAMQ8N6F7 178 aa7.59□□□□□ -1.2
PTCD3-201ENST00000254630 OR1K1Q8NGR3 316 aa7.59□□□□□ -1.2
PTCD3-201ENST00000254630 ZNF552Q9H707 407 aaPredicted RBP7.59□□□□□ -1.2
PTCD3-201ENST00000254630 IGHV3-21A0A0B4J1V1 117 aa7.58□□□□□ -1.2
PTCD3-201ENST00000254630 A0A0J9YW62 118 aa7.58□□□□□ -1.2
PTCD3-201ENST00000254630 NKX2-6A6NCS4 301 aa7.58□□□□□ -1.2
PTCD3-201ENST00000254630 GFRA3O60609 400 aa7.58□□□□□ -1.2
PTCD3-201ENST00000254630 PITX3O75364 302 aa7.58□□□□□ -1.2
PTCD3-201ENST00000254630 WISP3O95389 354 aaPredicted RBP7.58□□□□□ -1.2
PTCD3-201ENST00000254630 CXorf1O96002 111 aa7.58□□□□□ -1.2
PTCD3-201ENST00000254630 P01737 135 aa7.58□□□□□ -1.2
PTCD3-201ENST00000254630 NAT2P11245 290 aa7.58□□□□□ -1.2
PTCD3-201ENST00000254630 AREGP15514 252 aa7.58□□□□□ -1.2
PTCD3-201ENST00000254630 HTN1P15515 57 aa7.58□□□□□ -1.2
PTCD3-201ENST00000254630 HOXA4Q00056 320 aaPredicted RBP7.58□□□□□ -1.2
PTCD3-201ENST00000254630 EWSR1Q01844 656 aaKnown RBP eCLIP7.58□□□□□ -1.2
PTCD3-201ENST00000254630 FDX2Q6P4F2 183 aa7.58□□□□□ -1.2
PTCD3-201ENST00000254630 ZNF66Q6ZN08 573 aa7.58□□□□□ -1.2
PTCD3-201ENST00000254630 SSMEM1Q8WWF3 244 aa7.58□□□□□ -1.2
PTCD3-201ENST00000254630 MRPL24Q96A35 216 aaKnown RBP7.58□□□□□ -1.2
PTCD3-201ENST00000254630 OR2V2Q96R30 315 aa7.58□□□□□ -1.2
PTCD3-201ENST00000254630 CCL13Q99616 98 aa7.58□□□□□ -1.2
PTCD3-201ENST00000254630 RBM14Q96PK6 669 aaKnown RBP7.58□□□□□ -1.2
PTCD3-201ENST00000254630 ABHD1Q96SE0 405 aa7.58□□□□□ -1.2
PTCD3-201ENST00000254630 HDHD3Q9BSH5 251 aaPredicted RBP7.58□□□□□ -1.2
PTCD3-201ENST00000254630 ZDHHC8Q9ULC8 765 aa7.58□□□□□ -1.2
PTCD3-201ENST00000254630 VSIG4Q9Y279 399 aa7.58□□□□□ -1.2
PTCD3-201ENST00000254630 RAB29O14966 203 aa7.58□□□□□ -1.2
PTCD3-201ENST00000254630 PRF1P14222 555 aa7.58□□□□□ -1.2
PTCD3-201ENST00000254630 PPP1CCP36873 323 aaKnown RBP7.58□□□□□ -1.2
PTCD3-201ENST00000254630 NAAAQ02083 359 aa7.58□□□□□ -1.2
PTCD3-201ENST00000254630 KLF9Q13886 244 aaPredicted RBP7.58□□□□□ -1.2
PTCD3-201ENST00000254630 RNF212Q495C1 297 aa7.58□□□□□ -1.2
PTCD3-201ENST00000254630 ZNF658BQ4V348 819 aaPredicted RBP7.58□□□□□ -1.2
PTCD3-201ENST00000254630 NSUN5P2Q63ZY6 315 aa7.58□□□□□ -1.2
PTCD3-201ENST00000254630 SEZ6L2Q6UXD5 910 aa7.58□□□□□ -1.2
PTCD3-201ENST00000254630 FAM214BQ7L5A3 538 aa7.58□□□□□ -1.2
PTCD3-201ENST00000254630 SLC25A45Q8N413 288 aa7.58□□□□□ -1.2
PTCD3-201ENST00000254630 OR1L8Q8NGR8 309 aa7.58□□□□□ -1.2
PTCD3-201ENST00000254630 TRAV8-7A0A075B6U6 113 aa7.58□□□□□ -1.2
PTCD3-201ENST00000254630 IFNL4K9M1U5 179 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms