RNA–Protein interactions for RNA: ENST00000252597.7

USHBP1-201, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USHBP1, Length 3,335 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-201ENST00000252597 TWSG1Q9GZX9 223 aa10.31□□□□□ -0.76
USHBP1-201ENST00000252597 FAM234AQ9H0X4 552 aa10.31□□□□□ -0.76
USHBP1-201ENST00000252597 RPRMQ9NS64 109 aa10.31□□□□□ -0.76
USHBP1-201ENST00000252597 TRDCB7Z8K6 153 aa10.3□□□□□ -0.76
USHBP1-201ENST00000252597 C9J4A7 227 aa10.3□□□□□ -0.76
USHBP1-201ENST00000252597 S100GP29377 79 aa10.3□□□□□ -0.76
USHBP1-201ENST00000252597 CLN3Q13286 438 aa10.3□□□□□ -0.76
USHBP1-201ENST00000252597 CRIP3Q6Q6R5 217 aa10.3□□□□□ -0.76
USHBP1-201ENST00000252597 WDR5BQ86VZ2 330 aa10.3□□□□□ -0.76
USHBP1-201ENST00000252597 GUCD1Q96NT3 240 aa10.3□□□□□ -0.76
USHBP1-201ENST00000252597 SMIM7Q9BQ49 75 aa10.3□□□□□ -0.76
USHBP1-201ENST00000252597 C12orf49Q9H741 205 aa10.3□□□□□ -0.76
USHBP1-201ENST00000252597 CADP27708 2225 aa10.3□□□□□ -0.76
USHBP1-201ENST00000252597 ABCA1O95477 2261 aa10.3□□□□□ -0.76
USHBP1-201ENST00000252597 ARGFXA6NJG6 315 aa10.3□□□□□ -0.76
USHBP1-201ENST00000252597 FAM166BA8MTA8 275 aa10.3□□□□□ -0.76
USHBP1-201ENST00000252597 TSTD3H0UI37 97 aa10.3□□□□□ -0.76
USHBP1-201ENST00000252597 SYNGR1O43759 233 aa10.3□□□□□ -0.76
USHBP1-201ENST00000252597 IGHV2-70P01814 119 aa10.3□□□□□ -0.76
USHBP1-201ENST00000252597 IGHV2-5P01817 119 aa10.3□□□□□ -0.76
USHBP1-201ENST00000252597 CD55P08174 381 aa10.3□□□□□ -0.76
USHBP1-201ENST00000252597 RFPL3SP0C7P2 107 aa10.3□□□□□ -0.76
USHBP1-201ENST00000252597 UBE2G2P60604 165 aa10.3□□□□□ -0.76
USHBP1-201ENST00000252597 BATFQ16520 125 aa10.3□□□□□ -0.76
USHBP1-201ENST00000252597 LHFPL2Q6ZUX7 228 aa10.3□□□□□ -0.76
USHBP1-201ENST00000252597 MKXQ8IYA7 352 aa10.3□□□□□ -0.76
USHBP1-201ENST00000252597 LHX4Q969G2 390 aa10.3□□□□□ -0.76
USHBP1-201ENST00000252597 TM2D1Q9BX74 207 aa10.3□□□□□ -0.76
USHBP1-201ENST00000252597 TUBA4BQ9H853 241 aa10.3□□□□□ -0.76
USHBP1-201ENST00000252597 GPR27Q9NS67 375 aa10.3□□□□□ -0.76
USHBP1-201ENST00000252597 CHCHD2Q9Y6H1 151 aaPredicted RBP10.3□□□□□ -0.76
USHBP1-201ENST00000252597 A0A0U1RQV5 110 aa10.3□□□□□ -0.76
USHBP1-201ENST00000252597 CEACAM18A8MTB9 384 aa10.3□□□□□ -0.76
USHBP1-201ENST00000252597 KRASP01116 189 aa10.3□□□□□ -0.76
USHBP1-201ENST00000252597 NGFP01138 241 aa10.3□□□□□ -0.76
USHBP1-201ENST00000252597 FOLR2P14207 255 aa10.3□□□□□ -0.76
USHBP1-201ENST00000252597 HOXA5P20719 270 aa10.3□□□□□ -0.76
USHBP1-201ENST00000252597 GPX4P36969 197 aaPredicted RBP10.3□□□□□ -0.76
USHBP1-201ENST00000252597 HOXA4Q00056 320 aaPredicted RBP10.3□□□□□ -0.76
USHBP1-201ENST00000252597 ICAM4Q14773 271 aa10.3□□□□□ -0.76
USHBP1-201ENST00000252597 CXorf67Q86X51 503 aaPredicted RBP10.3□□□□□ -0.76
USHBP1-201ENST00000252597 MAFAQ8NHW3 353 aaPredicted RBP10.3□□□□□ -0.76
USHBP1-201ENST00000252597 RHBDD1Q8TEB9 315 aa10.3□□□□□ -0.76
USHBP1-201ENST00000252597 MOB3AQ96BX8 217 aa10.3□□□□□ -0.76
USHBP1-201ENST00000252597 TMEM204Q9BSN7 226 aa10.3□□□□□ -0.76
USHBP1-201ENST00000252597 SLC39A9Q9NUM3 307 aa10.3□□□□□ -0.76
USHBP1-201ENST00000252597 BTBD17A6NE02 478 aa10.29□□□□□ -0.76
USHBP1-201ENST00000252597 MRPL33O75394 65 aaKnown RBP10.29□□□□□ -0.76
USHBP1-201ENST00000252597 FOXG1P55316 489 aaPredicted RBP10.29□□□□□ -0.76
USHBP1-201ENST00000252597 RABEPKQ7Z6M1 372 aa10.29□□□□□ -0.76
USHBP1-201ENST00000252597 MRPL41Q8IXM3 137 aaKnown RBP10.29□□□□□ -0.76
USHBP1-201ENST00000252597 COMMD1Q8N668 190 aa10.29□□□□□ -0.76
USHBP1-201ENST00000252597 NABP1Q96AH0 204 aa10.29□□□□□ -0.76
USHBP1-201ENST00000252597 ATG101Q9BSB4 218 aa10.29□□□□□ -0.76
USHBP1-201ENST00000252597 TMEM222Q9H0R3 208 aa10.29□□□□□ -0.76
USHBP1-201ENST00000252597 V9GYS6 101 aa10.29□□□□□ -0.76
USHBP1-201ENST00000252597 ATMQ13315 3056 aa10.29□□□□□ -0.76
USHBP1-201ENST00000252597 A0A0G2JRQ6 117 aa10.29□□□□□ -0.76
USHBP1-201ENST00000252597 IGHV5-10-1A0A0J9YXX1 117 aa10.29□□□□□ -0.76
USHBP1-201ENST00000252597 OR5H1A6NKK0 313 aa10.29□□□□□ -0.76
USHBP1-201ENST00000252597 IFITM10A6NMD0 228 aa10.29□□□□□ -0.76
USHBP1-201ENST00000252597 CHRNA7P36544 502 aa10.29□□□□□ -0.76
USHBP1-201ENST00000252597 CLDN15P56746 228 aa10.29□□□□□ -0.76
USHBP1-201ENST00000252597 RBM11P57052 281 aaKnown RBP10.29□□□□□ -0.76
USHBP1-201ENST00000252597 TGFBR3Q03167 851 aa10.29□□□□□ -0.76
USHBP1-201ENST00000252597 SPSB3Q6PJ21 355 aa10.29□□□□□ -0.76
USHBP1-201ENST00000252597 ZNF66Q6ZN08 573 aa10.29□□□□□ -0.76
USHBP1-201ENST00000252597 TMPRSS7Q7RTY8 843 aa10.29□□□□□ -0.76
USHBP1-201ENST00000252597 SELENOHQ8IZQ5 122 aaKnown RBP10.29□□□□□ -0.76
USHBP1-201ENST00000252597 OR10D3Q8NH80 312 aa10.29□□□□□ -0.76
USHBP1-201ENST00000252597 OIT3Q8WWZ8 545 aa10.29□□□□□ -0.76
USHBP1-201ENST00000252597 C18orf12Q96KH6 178 aa10.29□□□□□ -0.76
USHBP1-201ENST00000252597 NUDT16L1Q9BRJ7 211 aaKnown RBP10.29□□□□□ -0.76
USHBP1-201ENST00000252597 CRIM1Q9NZV1 1036 aa10.29□□□□□ -0.76
USHBP1-201ENST00000252597 IFNL4K9M1U5 179 aa10.28□□□□□ -0.76
USHBP1-201ENST00000252597 FUT6P51993 359 aa10.28□□□□□ -0.76
USHBP1-201ENST00000252597 PRDX4Q13162 271 aa10.28□□□□□ -0.76
USHBP1-201ENST00000252597 RAB35Q15286 201 aa10.28□□□□□ -0.76
USHBP1-201ENST00000252597 CST9LP1Q5W188 147 aa10.28□□□□□ -0.76
USHBP1-201ENST00000252597 ZNF385CQ66K41 422 aaPredicted RBP10.28□□□□□ -0.76
USHBP1-201ENST00000252597 MCEMP1Q8IX19 187 aa10.28□□□□□ -0.76
USHBP1-201ENST00000252597 PSENENQ9NZ42 101 aa10.28□□□□□ -0.76
USHBP1-201ENST00000252597 TRAPPC2LQ9UL33 140 aa10.28□□□□□ -0.76
USHBP1-201ENST00000252597 COL4A2P08572 1712 aa10.28□□□□□ -0.76
USHBP1-201ENST00000252597 SNRPCP09234 159 aaKnown RBP10.28□□□□□ -0.76
USHBP1-201ENST00000252597 CCL1P22362 96 aa10.28□□□□□ -0.76
USHBP1-201ENST00000252597 ZNF816Q0VGE8 651 aaPredicted RBP10.28□□□□□ -0.76
USHBP1-201ENST00000252597 OR4F5Q8NH21 305 aa10.28□□□□□ -0.76
USHBP1-201ENST00000252597 OR10J5Q8NHC4 309 aa10.28□□□□□ -0.76
USHBP1-201ENST00000252597 OR4F4Q96R69 305 aa10.28□□□□□ -0.76
USHBP1-201ENST00000252597 SEBOXQ9HB31 216 aaPredicted RBP10.28□□□□□ -0.76
USHBP1-201ENST00000252597 OR1A1Q9P1Q5 309 aa10.28□□□□□ -0.76
USHBP1-201ENST00000252597 NOSIPQ9Y314 301 aaKnown RBP10.28□□□□□ -0.76
USHBP1-201ENST00000252597 GTF3C1Q12789 2109 aa10.28□□□□□ -0.76
USHBP1-201ENST00000252597 SLC22A20A6NK97 555 aa10.28□□□□□ -0.76
USHBP1-201ENST00000252597 ZDHHC23Q8IYP9 409 aa10.28□□□□□ -0.76
USHBP1-201ENST00000252597 ZIC4Q8N9L1 334 aa10.28□□□□□ -0.76
USHBP1-201ENST00000252597 GNPNAT1Q96EK6 184 aaPredicted RBP10.28□□□□□ -0.76
USHBP1-201ENST00000252597 OR5B12Q96R08 314 aa10.28□□□□□ -0.76
USHBP1-201ENST00000252597 TAAR9Q96RI9 348 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms