RNA–Protein interactions for RNA: ENST00000249923.7

COPB1-201, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-201ENST00000249923 ZNF695Q8IW36 515 aa8.67□□□□□ -1.02
COPB1-201ENST00000249923 SIGLEC12Q96PQ1 595 aa8.67□□□□□ -1.02
COPB1-201ENST00000249923 NIPSNAP3BQ9BS92 247 aa8.67□□□□□ -1.02
COPB1-201ENST00000249923 SLC7A10Q9NS82 523 aa8.67□□□□□ -1.02
COPB1-201ENST00000249923 ABCA1O95477 2261 aa8.67□□□□□ -1.02
COPB1-201ENST00000249923 DCHS1Q96JQ0 3298 aa8.67□□□□□ -1.02
COPB1-201ENST00000249923 PQLC2LA1A4F0 135 aa8.67□□□□□ -1.02
COPB1-201ENST00000249923 PPYP01298 95 aa8.67□□□□□ -1.02
COPB1-201ENST00000249923 OR8U8P0C7N1 319 aa8.67□□□□□ -1.02
COPB1-201ENST00000249923 TCN2P20062 427 aa8.67□□□□□ -1.02
COPB1-201ENST00000249923 SNCAP37840 140 aa8.67□□□□□ -1.02
COPB1-201ENST00000249923 IZUMO4Q1ZYL8 232 aa8.67□□□□□ -1.02
COPB1-201ENST00000249923 RIPPLY2Q5TAB7 128 aa8.67□□□□□ -1.02
COPB1-201ENST00000249923 WDR5BQ86VZ2 330 aa8.67□□□□□ -1.02
COPB1-201ENST00000249923 CCDC54Q8NEL0 328 aa8.67□□□□□ -1.02
COPB1-201ENST00000249923 Q8NFD4 153 aa8.67□□□□□ -1.02
COPB1-201ENST00000249923 OR51H1Q8NH63 302 aa8.67□□□□□ -1.02
COPB1-201ENST00000249923 GINS3Q9BRX5 216 aa8.67□□□□□ -1.02
COPB1-201ENST00000249923 WASF3Q9UPY6 502 aa8.67□□□□□ -1.02
COPB1-201ENST00000249923 NKX2-6A6NCS4 301 aa8.67□□□□□ -1.02
COPB1-201ENST00000249923 ZNF705FA8MVS1 300 aaPredicted RBP8.67□□□□□ -1.02
COPB1-201ENST00000249923 NEURL1O76050 574 aa8.67□□□□□ -1.02
COPB1-201ENST00000249923 P04436 131 aa8.67□□□□□ -1.02
COPB1-201ENST00000249923 SCTP09683 121 aa8.67□□□□□ -1.02
COPB1-201ENST00000249923 ZNF705DP0CH99 300 aaPredicted RBP8.67□□□□□ -1.02
COPB1-201ENST00000249923 ZNF705BP0CI00 300 aaPredicted RBP8.67□□□□□ -1.02
COPB1-201ENST00000249923 FUT6P51993 359 aa8.67□□□□□ -1.02
COPB1-201ENST00000249923 WDR25Q64LD2 544 aaPredicted RBP8.67□□□□□ -1.02
COPB1-201ENST00000249923 ZNF818PQ6ZRF7 136 aa8.67□□□□□ -1.02
COPB1-201ENST00000249923 CT55Q8WUE5 264 aa8.67□□□□□ -1.02
COPB1-201ENST00000249923 KCNE4Q8WWG9 221 aa8.67□□□□□ -1.02
COPB1-201ENST00000249923 TMEM37Q8WXS4 190 aa8.67□□□□□ -1.02
COPB1-201ENST00000249923 BCO1Q9HAY6 547 aa8.67□□□□□ -1.02
COPB1-201ENST00000249923 BSNQ9UPA5 3926 aa8.66□□□□□ -1.02
COPB1-201ENST00000249923 GJE1A6NN92 205 aa8.66□□□□□ -1.02
COPB1-201ENST00000249923 NGFP01138 241 aa8.66□□□□□ -1.02
COPB1-201ENST00000249923 MPV17LQ2QL34 196 aa8.66□□□□□ -1.02
COPB1-201ENST00000249923 SPNS3Q6ZMD2 512 aa8.66□□□□□ -1.02
COPB1-201ENST00000249923 ZNF429Q86V71 674 aa8.66□□□□□ -1.02
COPB1-201ENST00000249923 MRPL41Q8IXM3 137 aaKnown RBP8.66□□□□□ -1.02
COPB1-201ENST00000249923 OR56B2PQ8NGI1 322 aa8.66□□□□□ -1.02
COPB1-201ENST00000249923 RPUSD4Q96CM3 377 aaKnown RBP8.66□□□□□ -1.02
COPB1-201ENST00000249923 SLC35B3Q9H1N7 401 aa8.66□□□□□ -1.02
COPB1-201ENST00000249923 MTCH1Q9NZJ7 389 aa8.66□□□□□ -1.02
COPB1-201ENST00000249923 TINAGQ9UJW2 476 aa8.66□□□□□ -1.02
COPB1-201ENST00000249923 MED12LQ86YW9 2145 aa8.66□□□□□ -1.02
COPB1-201ENST00000249923 ZNF816-ZNF321PA0A0X1KG74 233 aa8.66□□□□□ -1.02
COPB1-201ENST00000249923 E5RGE8 158 aa8.66□□□□□ -1.02
COPB1-201ENST00000249923 HSD17B6O14756 317 aa8.66□□□□□ -1.02
COPB1-201ENST00000249923 SS18L1O75177 396 aaPredicted RBP8.66□□□□□ -1.02
COPB1-201ENST00000249923 HNF1AP20823 631 aa8.66□□□□□ -1.02
COPB1-201ENST00000249923 P2RY1P47900 373 aa8.66□□□□□ -1.02
COPB1-201ENST00000249923 LHX2P50458 406 aa8.66□□□□□ -1.02
COPB1-201ENST00000249923 CCL20P78556 96 aa8.66□□□□□ -1.02
COPB1-201ENST00000249923 DLK1P80370 383 aa8.66□□□□□ -1.02
COPB1-201ENST00000249923 TRA2AQ13595 282 aaKnown RBP eCLIP8.66□□□□□ -1.02
COPB1-201ENST00000249923 ZNF295-AS1Q8N0V1 137 aa8.66□□□□□ -1.02
COPB1-201ENST00000249923 CYB561D1Q8N8Q1 229 aa8.66□□□□□ -1.02
COPB1-201ENST00000249923 PLPPR1Q8TBJ4 325 aa8.66□□□□□ -1.02
COPB1-201ENST00000249923 BOD1Q96IK1 185 aa8.66□□□□□ -1.02
COPB1-201ENST00000249923 NSG2Q9Y328 171 aa8.66□□□□□ -1.02
COPB1-201ENST00000249923 IGSF23A1L1A6 192 aa8.66□□□□□ -1.02
COPB1-201ENST00000249923 C5orf52A6NGY3 159 aa8.66□□□□□ -1.02
COPB1-201ENST00000249923 CEBPZOSA8MTT3 80 aa8.66□□□□□ -1.02
COPB1-201ENST00000249923 H3BQ15 152 aa8.66□□□□□ -1.02
COPB1-201ENST00000249923 HSPA12AO43301 675 aa8.66□□□□□ -1.02
COPB1-201ENST00000249923 SCGB1D1O95968 90 aa8.66□□□□□ -1.02
COPB1-201ENST00000249923 NAPSAO96009 420 aa8.66□□□□□ -1.02
COPB1-201ENST00000249923 NDUFB7P17568 137 aa8.66□□□□□ -1.02
COPB1-201ENST00000249923 GDF1P27539 372 aa8.66□□□□□ -1.02
COPB1-201ENST00000249923 LPAL2Q16609 132 aa8.66□□□□□ -1.02
COPB1-201ENST00000249923 PYY3Q5JQD4 70 aa8.66□□□□□ -1.02
COPB1-201ENST00000249923 CST9LP1Q5W188 147 aa8.66□□□□□ -1.02
COPB1-201ENST00000249923 THNSL2Q86YJ6 484 aa8.66□□□□□ -1.02
COPB1-201ENST00000249923 ZNF610Q8N9Z0 462 aa8.66□□□□□ -1.02
COPB1-201ENST00000249923 REPIN1Q9BWE0 567 aaKnown RBP8.66□□□□□ -1.02
COPB1-201ENST00000249923 PRDM14Q9GZV8 571 aa8.66□□□□□ -1.02
COPB1-201ENST00000249923 ZNF552Q9H707 407 aaPredicted RBP8.66□□□□□ -1.02
COPB1-201ENST00000249923 GLRX2Q9NS18 164 aa8.66□□□□□ -1.02
COPB1-201ENST00000249923 YKT6O15498 198 aa8.65□□□□□ -1.02
COPB1-201ENST00000249923 IFNA10P01566 189 aa8.65□□□□□ -1.02
COPB1-201ENST00000249923 FOSL1P15407 271 aa8.65□□□□□ -1.02
COPB1-201ENST00000249923 GPM6AP51674 278 aa8.65□□□□□ -1.02
COPB1-201ENST00000249923 UCP3P55916 312 aa8.65□□□□□ -1.02
COPB1-201ENST00000249923 CLDN18P56856 261 aa8.65□□□□□ -1.02
COPB1-201ENST00000249923 SP5Q6BEB4 398 aaPredicted RBP8.65□□□□□ -1.02
COPB1-201ENST00000249923 EDARADDQ8WWZ3 215 aa8.65□□□□□ -1.02
COPB1-201ENST00000249923 RAB39BQ96DA2 213 aa8.65□□□□□ -1.02
COPB1-201ENST00000249923 ZNF488Q96MN9 340 aa8.65□□□□□ -1.02
COPB1-201ENST00000249923 CDX2Q99626 313 aaPredicted RBP8.65□□□□□ -1.02
COPB1-201ENST00000249923 SPRY4Q9C004 299 aa8.65□□□□□ -1.02
COPB1-201ENST00000249923 EGLN1Q9GZT9 426 aa8.65□□□□□ -1.02
COPB1-201ENST00000249923 RNF122Q9H9V4 155 aa8.65□□□□□ -1.02
COPB1-201ENST00000249923 PLEKHA2Q9HB19 425 aa8.65□□□□□ -1.02
COPB1-201ENST00000249923 MPPED1O15442 326 aa8.65□□□□□ -1.03
COPB1-201ENST00000249923 ST8SIA3O43173 380 aa8.65□□□□□ -1.03
COPB1-201ENST00000249923 FUT3P21217 361 aa8.65□□□□□ -1.03
COPB1-201ENST00000249923 ARF1P84077 181 aaKnown RBP8.65□□□□□ -1.03
COPB1-201ENST00000249923 SRYQ05066 204 aa8.65□□□□□ -1.03
COPB1-201ENST00000249923 TUSC5Q8IXB3 177 aa8.65□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms