RNA–Protein interactions for RNA: ENST00000248668.4

LRFN1-201, Transcript of leucine rich repeat and fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN1, Length 3,381 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1-201ENST00000248668 TK1P04183 234 aa13.45□□□□□ -0.26
LRFN1-201ENST00000248668 IGHV1-2P23083 117 aa13.45□□□□□ -0.26
LRFN1-201ENST00000248668 GNRHRP30968 328 aa13.45□□□□□ -0.26
LRFN1-201ENST00000248668 KRBOX4Q5JUW0 171 aa13.45□□□□□ -0.26
LRFN1-201ENST00000248668 LIAT1Q6ZQX7 453 aa13.45□□□□□ -0.26
LRFN1-201ENST00000248668 GAPTQ8N292 157 aa13.45□□□□□ -0.26
LRFN1-201ENST00000248668 RNF122Q9H9V4 155 aa13.45□□□□□ -0.26
LRFN1-201ENST00000248668 Q9N2K0 584 aa13.45□□□□□ -0.26
LRFN1-201ENST00000248668 MED19A0JLT2 244 aaPredicted RBP13.44□□□□□ -0.26
LRFN1-201ENST00000248668 OR2B8PP59922 312 aa13.44□□□□□ -0.26
LRFN1-201ENST00000248668 FBXW12Q6X9E4 464 aa13.44□□□□□ -0.26
LRFN1-201ENST00000248668 ZNF818PQ6ZRF7 136 aa13.44□□□□□ -0.26
LRFN1-201ENST00000248668 MSI2Q96DH6 328 aaKnown RBP13.44□□□□□ -0.26
LRFN1-201ENST00000248668 C14orf79Q96F83 325 aa13.44□□□□□ -0.26
LRFN1-201ENST00000248668 PRO1933Q9H354 126 aa13.44□□□□□ -0.26
LRFN1-201ENST00000248668 HEATR1Q9H583 2144 aaKnown RBP13.44□□□□□ -0.26
LRFN1-201ENST00000248668 IGKV1-6A0A0C4DH72 117 aa13.44□□□□□ -0.26
LRFN1-201ENST00000248668 SIRPB1O00241 398 aa13.44□□□□□ -0.26
LRFN1-201ENST00000248668 GNG3P63215 75 aa13.44□□□□□ -0.26
LRFN1-201ENST00000248668 NANOS1Q8WY41 292 aaKnown RBP13.44□□□□□ -0.26
LRFN1-201ENST00000248668 SYT3Q9BQG1 590 aa13.44□□□□□ -0.26
LRFN1-201ENST00000248668 CCL28Q9NRJ3 127 aa13.44□□□□□ -0.26
LRFN1-201ENST00000248668 UBE2J1Q9Y385 318 aaPredicted RBP13.44□□□□□ -0.26
LRFN1-201ENST00000248668 MUC6Q6W4X9 2439 aa13.44□□□□□ -0.26
LRFN1-201ENST00000248668 CXorf65A6NEN9 183 aa13.43□□□□□ -0.26
LRFN1-201ENST00000248668 SS18L1O75177 396 aaPredicted RBP13.43□□□□□ -0.26
LRFN1-201ENST00000248668 GRPP07492 148 aa13.43□□□□□ -0.26
LRFN1-201ENST00000248668 LYL1P12980 280 aa13.43□□□□□ -0.26
LRFN1-201ENST00000248668 TBC1D28Q2M2D7 210 aa13.43□□□□□ -0.26
LRFN1-201ENST00000248668 VWA1Q6PCB0 445 aa13.43□□□□□ -0.26
LRFN1-201ENST00000248668 TBC1D26Q86UD7 250 aa13.43□□□□□ -0.26
LRFN1-201ENST00000248668 FAM58AQ8N1B3 248 aa13.43□□□□□ -0.26
LRFN1-201ENST00000248668 RNF141Q8WVD5 230 aa13.43□□□□□ -0.26
LRFN1-201ENST00000248668 MPPED1O15442 326 aa13.43□□□□□ -0.26
LRFN1-201ENST00000248668 S100A8P05109 93 aa13.43□□□□□ -0.26
LRFN1-201ENST00000248668 PEA15Q15121 130 aa13.43□□□□□ -0.26
LRFN1-201ENST00000248668 MAGT1Q9H0U3 335 aa13.43□□□□□ -0.26
LRFN1-201ENST00000248668 CDH20Q9HBT6 801 aa13.43□□□□□ -0.26
LRFN1-201ENST00000248668 ATMQ13315 3056 aa13.43□□□□□ -0.26
LRFN1-201ENST00000248668 C3orf85A0A1B0GTC6 90 aa13.43□□□□□ -0.26
LRFN1-201ENST00000248668 GALR2O43603 387 aaPredicted RBP13.43□□□□□ -0.26
LRFN1-201ENST00000248668 PIP4P1Q86T03 277 aa13.43□□□□□ -0.26
LRFN1-201ENST00000248668 LGI3Q8N145 548 aa13.43□□□□□ -0.26
LRFN1-201ENST00000248668 TRAV24A0A0B4J272 114 aa13.42□□□□□ -0.26
LRFN1-201ENST00000248668 NKX2-6A6NCS4 301 aa13.42□□□□□ -0.26
LRFN1-201ENST00000248668 C5orf52A6NGY3 159 aa13.42□□□□□ -0.26
LRFN1-201ENST00000248668 CDIPTO14735 213 aa13.42□□□□□ -0.26
LRFN1-201ENST00000248668 MED6O75586 246 aa13.42□□□□□ -0.26
LRFN1-201ENST00000248668 NAPSAO96009 420 aa13.42□□□□□ -0.26
LRFN1-201ENST00000248668 CEBPDP49716 269 aaPredicted RBP13.42□□□□□ -0.26
LRFN1-201ENST00000248668 CDPF1Q6NVV7 123 aa13.42□□□□□ -0.26
LRFN1-201ENST00000248668 WDR86Q86TI4 376 aa13.42□□□□□ -0.26
LRFN1-201ENST00000248668 ZNF573Q86YE8 665 aa13.42□□□□□ -0.26
LRFN1-201ENST00000248668 DMBX1Q8NFW5 382 aa13.42□□□□□ -0.26
LRFN1-201ENST00000248668 GALNT14Q96FL9 552 aa13.42□□□□□ -0.26
LRFN1-201ENST00000248668 ASCL3Q9NQ33 180 aa13.42□□□□□ -0.26
LRFN1-201ENST00000248668 CDRT15L2A8MXV6 281 aa13.42□□□□□ -0.26
LRFN1-201ENST00000248668 H0YL77 283 aa13.42□□□□□ -0.26
LRFN1-201ENST00000248668 CLN5O75503 358 aa13.42□□□□□ -0.26
LRFN1-201ENST00000248668 SLC34A2O95436 690 aa13.42□□□□□ -0.26
LRFN1-201ENST00000248668 TFF1P04155 84 aa13.42□□□□□ -0.26
LRFN1-201ENST00000248668 FAM157CP0CG43 387 aa13.42□□□□□ -0.26
LRFN1-201ENST00000248668 PPP1CBP62140 327 aa13.42□□□□□ -0.26
LRFN1-201ENST00000248668 SLC25A40Q8TBP6 338 aa13.42□□□□□ -0.26
LRFN1-201ENST00000248668 LUZP4Q9P127 313 aa13.42□□□□□ -0.26
LRFN1-201ENST00000248668 DNAJB11Q9UBS4 358 aa13.42□□□□□ -0.26
LRFN1-201ENST00000248668 TUBD1Q9UJT1 453 aa13.42□□□□□ -0.26
LRFN1-201ENST00000248668 AMDHD2Q9Y303 409 aa13.42□□□□□ -0.26
LRFN1-201ENST00000248668 COLCA2A8K830 154 aa13.41□□□□□ -0.26
LRFN1-201ENST00000248668 NHLH2Q02577 135 aa13.41□□□□□ -0.26
LRFN1-201ENST00000248668 CCDC71LQ8N9Z2 235 aa13.41□□□□□ -0.26
LRFN1-201ENST00000248668 OR1J1Q8NGS3 322 aa13.41□□□□□ -0.26
LRFN1-201ENST00000248668 ISOC2Q96AB3 205 aa13.41□□□□□ -0.26
LRFN1-201ENST00000248668 GMPPAQ96IJ6 420 aaPredicted RBP13.41□□□□□ -0.26
LRFN1-201ENST00000248668 KIRREL1Q96J84 757 aa13.41□□□□□ -0.26
LRFN1-201ENST00000248668 CLCC1Q96S66 551 aa13.41□□□□□ -0.26
LRFN1-201ENST00000248668 OR14J1Q9UGF5 321 aa13.41□□□□□ -0.26
LRFN1-201ENST00000248668 DMXL2Q8TDJ6 3036 aa13.41□□□□□ -0.26
LRFN1-201ENST00000248668 OMGP23515 440 aa13.41□□□□□ -0.26
LRFN1-201ENST00000248668 RAB2AP61019 212 aa13.41□□□□□ -0.26
LRFN1-201ENST00000248668 FOXF2Q12947 444 aa13.41□□□□□ -0.26
LRFN1-201ENST00000248668 OR51H1Q8NH63 302 aa13.41□□□□□ -0.26
LRFN1-201ENST00000248668 C18orf12Q96KH6 178 aa13.41□□□□□ -0.26
LRFN1-201ENST00000248668 PLA2G2EQ9NZK7 142 aa13.41□□□□□ -0.26
LRFN1-201ENST00000248668 RCL1Q9Y2P8 373 aaKnown RBP13.41□□□□□ -0.26
LRFN1-201ENST00000248668 A0A1B0GV50 99 aa13.41□□□□□ -0.26
LRFN1-201ENST00000248668 FGF16O43320 207 aa13.41□□□□□ -0.26
LRFN1-201ENST00000248668 SMPD2O60906 423 aa13.41□□□□□ -0.26
LRFN1-201ENST00000248668 LPAR6P43657 344 aa13.41□□□□□ -0.26
LRFN1-201ENST00000248668 NUBP1P53384 320 aa13.41□□□□□ -0.26
LRFN1-201ENST00000248668 NAAAQ02083 359 aa13.41□□□□□ -0.26
LRFN1-201ENST00000248668 PDZD11Q5EBL8 140 aa13.41□□□□□ -0.26
LRFN1-201ENST00000248668 ZNF695Q8IW36 515 aa13.41□□□□□ -0.26
LRFN1-201ENST00000248668 Q8NFD4 153 aa13.41□□□□□ -0.26
LRFN1-201ENST00000248668 MRPL30Q8TCC3 161 aaKnown RBP13.41□□□□□ -0.26
LRFN1-201ENST00000248668 DEGS1O15121 323 aa13.4□□□□□ -0.26
LRFN1-201ENST00000248668 C9orf106Q8NAJ2 232 aa13.4□□□□□ -0.26
LRFN1-201ENST00000248668 OR4A4PQ8NGN8 299 aa13.4□□□□□ -0.26
LRFN1-201ENST00000248668 POM121Q96HA1 1249 aa13.4□□□□□ -0.26
LRFN1-201ENST00000248668 DLL3Q9NYJ7 618 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms