RNA–Protein interactions for RNA: ENST00000247020.8

SDF2-201, Transcript of stromal cell derived factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2, Length 1,568 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-201ENST00000247020 COQ2Q96H96 371 aa11.88□□□□□ -0.51
SDF2-201ENST00000247020 HYLS1Q96M11 299 aa11.88□□□□□ -0.51
SDF2-201ENST00000247020 DMRTB1Q96MA1 342 aa11.88□□□□□ -0.51
SDF2-201ENST00000247020 TOLLIPQ9H0E2 274 aa11.88□□□□□ -0.51
SDF2-201ENST00000247020 DLL4Q9NR61 685 aa11.88□□□□□ -0.51
SDF2-201ENST00000247020 RAI1Q7Z5J4 1906 aaPredicted RBP11.88□□□□□ -0.51
SDF2-201ENST00000247020 ANKHD1Q8IWZ3 2542 aaKnown RBP11.88□□□□□ -0.51
SDF2-201ENST00000247020 IGKV1-6A0A0C4DH72 117 aa11.88□□□□□ -0.51
SDF2-201ENST00000247020 CRYM-AS1A6NIL9 109 aa11.88□□□□□ -0.51
SDF2-201ENST00000247020 BET1O15155 118 aa11.88□□□□□ -0.51
SDF2-201ENST00000247020 RGS11O94810 467 aa11.88□□□□□ -0.51
SDF2-201ENST00000247020 AADACP22760 399 aa11.88□□□□□ -0.51
SDF2-201ENST00000247020 VAMP1P23763 118 aa11.88□□□□□ -0.51
SDF2-201ENST00000247020 GABRA2P47869 451 aa11.88□□□□□ -0.51
SDF2-201ENST00000247020 GZMKP49863 264 aa11.88□□□□□ -0.51
SDF2-201ENST00000247020 RND3P61587 244 aa11.88□□□□□ -0.51
SDF2-201ENST00000247020 BAMBIQ13145 260 aa11.88□□□□□ -0.51
SDF2-201ENST00000247020 KRBOX4Q5JUW0 171 aa11.88□□□□□ -0.51
SDF2-201ENST00000247020 SGPP2Q8IWX5 399 aa11.88□□□□□ -0.51
SDF2-201ENST00000247020 H1FOOQ8IZA3 346 aaPredicted RBP11.88□□□□□ -0.51
SDF2-201ENST00000247020 OR5T2Q8NGG2 359 aa11.88□□□□□ -0.51
SDF2-201ENST00000247020 COQ8AQ8NI60 647 aa11.88□□□□□ -0.51
SDF2-201ENST00000247020 KIRREL1Q96J84 757 aa11.88□□□□□ -0.51
SDF2-201ENST00000247020 ZNF665Q9H7R5 613 aa11.88□□□□□ -0.51
SDF2-201ENST00000247020 RAB9BQ9NP90 201 aa11.88□□□□□ -0.51
SDF2-201ENST00000247020 METRNQ9UJH8 293 aa11.88□□□□□ -0.51
SDF2-201ENST00000247020 CACNA1DQ01668 2161 aa11.87□□□□□ -0.51
SDF2-201ENST00000247020 ARFGEF3Q5TH69 2177 aa11.87□□□□□ -0.51
SDF2-201ENST00000247020 TRAV38-1A0A0B4J264 116 aa11.87□□□□□ -0.51
SDF2-201ENST00000247020 DBX1A6NMT0 343 aa11.87□□□□□ -0.51
SDF2-201ENST00000247020 LGALS8O00214 317 aa11.87□□□□□ -0.51
SDF2-201ENST00000247020 SNAPC5O75971 98 aa11.87□□□□□ -0.51
SDF2-201ENST00000247020 FSTL3O95633 263 aa11.87□□□□□ -0.51
SDF2-201ENST00000247020 CYB5R3P00387 301 aaPredicted RBP11.87□□□□□ -0.51
SDF2-201ENST00000247020 RPS2P15880 293 aaKnown RBP11.87□□□□□ -0.51
SDF2-201ENST00000247020 IGFBP2P18065 325 aa11.87□□□□□ -0.51
SDF2-201ENST00000247020 NFYAP23511 347 aaPredicted RBP11.87□□□□□ -0.51
SDF2-201ENST00000247020 CD80P33681 288 aa11.87□□□□□ -0.51
SDF2-201ENST00000247020 SUPT4H1P63272 117 aaKnown RBP11.87□□□□□ -0.51
SDF2-201ENST00000247020 SRSF4Q08170 494 aaKnown RBP11.87□□□□□ -0.51
SDF2-201ENST00000247020 KCNJ8Q15842 424 aa11.87□□□□□ -0.51
SDF2-201ENST00000247020 CR1LQ2VPA4 569 aa11.87□□□□□ -0.51
SDF2-201ENST00000247020 ABCA11PQ4W5N1 156 aa11.87□□□□□ -0.51
SDF2-201ENST00000247020 LIN54Q6MZP7 749 aa11.87□□□□□ -0.51
SDF2-201ENST00000247020 CLEC18BQ6UXF7 455 aa11.87□□□□□ -0.51
SDF2-201ENST00000247020 BOLLQ8N9W6 283 aaKnown RBP11.87□□□□□ -0.51
SDF2-201ENST00000247020 OR5M8Q8NGP6 311 aa11.87□□□□□ -0.51
SDF2-201ENST00000247020 FAM216AQ8WUB2 273 aa11.87□□□□□ -0.51
SDF2-201ENST00000247020 TOMM40LQ969M1 308 aa11.87□□□□□ -0.51
SDF2-201ENST00000247020 GALNT14Q96FL9 552 aa11.87□□□□□ -0.51
SDF2-201ENST00000247020 TMPRSS13Q9BYE2 586 aa11.87□□□□□ -0.51
SDF2-201ENST00000247020 TAF9BQ9HBM6 251 aa11.87□□□□□ -0.51
SDF2-201ENST00000247020 TMEM106BQ9NUM4 274 aa11.87□□□□□ -0.51
SDF2-201ENST00000247020 KIF25Q9UIL4 384 aa11.87□□□□□ -0.51
SDF2-201ENST00000247020 KCNIP3Q9Y2W7 256 aa11.87□□□□□ -0.51
SDF2-201ENST00000247020 OR2W1Q9Y3N9 320 aa11.87□□□□□ -0.51
SDF2-201ENST00000247020 USP24Q9UPU5 2620 aa11.87□□□□□ -0.51
SDF2-201ENST00000247020 DSCAMO60469 2012 aa11.87□□□□□ -0.51
SDF2-201ENST00000247020 TMEM178BH3BS89 294 aa11.86□□□□□ -0.51
SDF2-201ENST00000247020 GOSR2O14653 212 aa11.86□□□□□ -0.51
SDF2-201ENST00000247020 PIGPP57054 158 aa11.86□□□□□ -0.51
SDF2-201ENST00000247020 FXYD4P59646 89 aa11.86□□□□□ -0.51
SDF2-201ENST00000247020 AESQ08117 197 aa11.86□□□□□ -0.51
SDF2-201ENST00000247020 ZNF788Q6ZQV5 615 aa11.86□□□□□ -0.51
SDF2-201ENST00000247020 NLRC3Q7RTR2 1065 aa11.86□□□□□ -0.51
SDF2-201ENST00000247020 VRK1Q99986 396 aaPredicted RBP11.86□□□□□ -0.51
SDF2-201ENST00000247020 SUCNR1Q9BXA5 334 aa11.86□□□□□ -0.51
SDF2-201ENST00000247020 SLC2A9Q9NRM0 540 aa11.86□□□□□ -0.51
SDF2-201ENST00000247020 CBLN4Q9NTU7 201 aa11.86□□□□□ -0.51
SDF2-201ENST00000247020 MAB21L2Q9Y586 359 aa11.86□□□□□ -0.51
SDF2-201ENST00000247020 ICE1Q9Y2F5 2266 aa11.85□□□□□ -0.51
SDF2-201ENST00000247020 PPIAL4EA0A075B759 164 aa11.85□□□□□ -0.51
SDF2-201ENST00000247020 IGHV3OR15-7A0A075B7D8 119 aa11.85□□□□□ -0.51
SDF2-201ENST00000247020 NKX6-3A6NJ46 265 aa11.85□□□□□ -0.51
SDF2-201ENST00000247020 PPIAL4DF5H284 164 aa11.85□□□□□ -0.51
SDF2-201ENST00000247020 SIGLEC5O15389 551 aa11.85□□□□□ -0.51
SDF2-201ENST00000247020 IFNA2P01563 188 aa11.85□□□□□ -0.51
SDF2-201ENST00000247020 HEXAP06865 529 aa11.85□□□□□ -0.51
SDF2-201ENST00000247020 PPIAL4FP0DN26 164 aa11.85□□□□□ -0.51
SDF2-201ENST00000247020 PI3P19957 117 aa11.85□□□□□ -0.51
SDF2-201ENST00000247020 GZMHP20718 246 aa11.85□□□□□ -0.51
SDF2-201ENST00000247020 HOXA4Q00056 320 aaPredicted RBP11.85□□□□□ -0.51
SDF2-201ENST00000247020 ZNF565Q8N9K5 539 aa11.85□□□□□ -0.51
SDF2-201ENST00000247020 UXS1Q8NBZ7 420 aa11.85□□□□□ -0.51
SDF2-201ENST00000247020 GALMQ96C23 342 aa11.85□□□□□ -0.51
SDF2-201ENST00000247020 GAFA1Q96PS6 74 aa11.85□□□□□ -0.51
SDF2-201ENST00000247020 NAA60Q9H7X0 242 aa11.85□□□□□ -0.51
SDF2-201ENST00000247020 OR6C3Q9NZP0 311 aa11.85□□□□□ -0.51
SDF2-201ENST00000247020 PIPOXQ9P0Z9 390 aa11.85□□□□□ -0.51
SDF2-201ENST00000247020 PPIAL4AQ9Y536 164 aa11.85□□□□□ -0.51
SDF2-201ENST00000247020 DSCAML1Q8TD84 2053 aa11.85□□□□□ -0.51
SDF2-201ENST00000247020 IGHV1-69-2A0A0G2JMI3 117 aa11.84□□□□□ -0.51
SDF2-201ENST00000247020 ODAMA1E959 279 aa11.84□□□□□ -0.51
SDF2-201ENST00000247020 C12orf77C9JDV5 145 aa11.84□□□□□ -0.51
SDF2-201ENST00000247020 GPR31O00270 319 aa11.84□□□□□ -0.51
SDF2-201ENST00000247020 NDUFA2O43678 99 aa11.84□□□□□ -0.51
SDF2-201ENST00000247020 WNT2P09544 360 aa11.84□□□□□ -0.51
SDF2-201ENST00000247020 S100GP29377 79 aa11.84□□□□□ -0.51
SDF2-201ENST00000247020 GLIPR1P48060 266 aa11.84□□□□□ -0.51
SDF2-201ENST00000247020 P2RX3P56373 397 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 86.3 ms