RNA–Protein interactions for RNA: ENST00000244360.6

RNF39-201, Transcript of ring finger protein 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF39, Length 2,206 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39-201ENST00000244360 HIST1H2BAQ96A08 127 aa18.66■□□□□ 0.58
RNF39-201ENST00000244360 ZNF488Q96MN9 340 aa18.66■□□□□ 0.58
RNF39-201ENST00000244360 PARD6AQ9NPB6 346 aa18.66■□□□□ 0.58
RNF39-201ENST00000244360 CACNA1HO95180 2353 aa18.66■□□□□ 0.58
RNF39-201ENST00000244360 IGKV1-6A0A0C4DH72 117 aa18.66■□□□□ 0.58
RNF39-201ENST00000244360 HOXB1P14653 301 aaPredicted RBP18.66■□□□□ 0.58
RNF39-201ENST00000244360 CA6P23280 308 aa18.66■□□□□ 0.58
RNF39-201ENST00000244360 GUSBP1Q15486 140 aa18.66■□□□□ 0.58
RNF39-201ENST00000244360 ZNF880Q6PDB4 577 aa18.66■□□□□ 0.58
RNF39-201ENST00000244360 IGFL2Q6UWQ7 119 aa18.66■□□□□ 0.58
RNF39-201ENST00000244360 P4HA3Q7Z4N8 544 aa18.66■□□□□ 0.58
RNF39-201ENST00000244360 ZFP82Q8N141 532 aa18.66■□□□□ 0.58
RNF39-201ENST00000244360 FAM58AQ8N1B3 248 aa18.66■□□□□ 0.58
RNF39-201ENST00000244360 OR2C3Q8N628 320 aa18.66■□□□□ 0.58
RNF39-201ENST00000244360 DEFB124Q8NES8 71 aa18.66■□□□□ 0.58
RNF39-201ENST00000244360 TMEM56Q96MV1 263 aa18.66■□□□□ 0.58
RNF39-201ENST00000244360 OR51B6Q9H340 312 aa18.66■□□□□ 0.58
RNF39-201ENST00000244360 C11orf1Q9H5F2 150 aa18.66■□□□□ 0.58
RNF39-201ENST00000244360 TMEM56-RWDD3S4R434 201 aa18.66■□□□□ 0.58
RNF39-201ENST00000244360 TRAV24A0A0B4J272 114 aa18.65■□□□□ 0.58
RNF39-201ENST00000244360 C7orf77A4D0Y5 90 aa18.65■□□□□ 0.58
RNF39-201ENST00000244360 GLI4P10075 376 aa18.65■□□□□ 0.58
RNF39-201ENST00000244360 NHLH2Q02577 135 aa18.65■□□□□ 0.58
RNF39-201ENST00000244360 MEX3BQ6ZN04 569 aaKnown RBP18.65■□□□□ 0.58
RNF39-201ENST00000244360 C5orf24Q7Z6I8 188 aa18.65■□□□□ 0.58
RNF39-201ENST00000244360 MYPOPQ86VE0 399 aaPredicted RBP18.65■□□□□ 0.58
RNF39-201ENST00000244360 NEK7Q8TDX7 302 aa18.65■□□□□ 0.58
RNF39-201ENST00000244360 SMPD2O60906 423 aa18.65■□□□□ 0.58
RNF39-201ENST00000244360 PITX3O75364 302 aa18.65■□□□□ 0.58
RNF39-201ENST00000244360 IGHV1-2P23083 117 aa18.65■□□□□ 0.58
RNF39-201ENST00000244360 AKIRIN2Q53H80 203 aa18.65■□□□□ 0.58
RNF39-201ENST00000244360 ZNF561Q8N587 486 aa18.65■□□□□ 0.58
RNF39-201ENST00000244360 HSD17B11Q8NBQ5 300 aa18.65■□□□□ 0.58
RNF39-201ENST00000244360 SLC25A31Q9H0C2 315 aa18.65■□□□□ 0.58
RNF39-201ENST00000244360 SLC35B3Q9H1N7 401 aa18.65■□□□□ 0.58
RNF39-201ENST00000244360 DOCK7Q96N67 2140 aa18.65■□□□□ 0.58
RNF39-201ENST00000244360 UMAD1C9J7I0 102 aa18.64■□□□□ 0.57
RNF39-201ENST00000244360 K7N7A8 449 aa18.64■□□□□ 0.57
RNF39-201ENST00000244360 HSPB6O14558 160 aa18.64■□□□□ 0.57
RNF39-201ENST00000244360 NKX2-1P43699 371 aaPredicted RBP18.64■□□□□ 0.57
RNF39-201ENST00000244360 SRSF6Q13247 344 aaKnown RBP18.64■□□□□ 0.57
RNF39-201ENST00000244360 SPATA46Q5T0L3 261 aa18.64■□□□□ 0.57
RNF39-201ENST00000244360 TBC1D26Q86UD7 250 aa18.64■□□□□ 0.57
RNF39-201ENST00000244360 ZNF695Q8IW36 515 aa18.64■□□□□ 0.57
RNF39-201ENST00000244360 FDCSPQ8NFU4 85 aa18.64■□□□□ 0.57
RNF39-201ENST00000244360 USB1Q9BQ65 265 aaKnown RBP18.64■□□□□ 0.57
RNF39-201ENST00000244360 SH3BGRL3Q9H299 93 aa18.64■□□□□ 0.57
RNF39-201ENST00000244360 KCNJ16Q9NPI9 418 aa18.64■□□□□ 0.57
RNF39-201ENST00000244360 UBE2J1Q9Y385 318 aaPredicted RBP18.64■□□□□ 0.57
RNF39-201ENST00000244360 MED12LQ86YW9 2145 aa18.64■□□□□ 0.57
RNF39-201ENST00000244360 IGKV1D-13A0A0B4J2D9 117 aa18.64■□□□□ 0.57
RNF39-201ENST00000244360 M0R036 132 aa18.64■□□□□ 0.57
RNF39-201ENST00000244360 SLC34A2O95436 690 aa18.64■□□□□ 0.57
RNF39-201ENST00000244360 IGKV1-13P0DP09 117 aa18.64■□□□□ 0.57
RNF39-201ENST00000244360 ZNF44P15621 663 aa18.64■□□□□ 0.57
RNF39-201ENST00000244360 TGFBR3Q03167 851 aa18.64■□□□□ 0.57
RNF39-201ENST00000244360 ZNF818PQ6ZRF7 136 aa18.64■□□□□ 0.57
RNF39-201ENST00000244360 ZNF565Q8N9K5 539 aa18.64■□□□□ 0.57
RNF39-201ENST00000244360 OR1J1Q8NGS3 322 aa18.64■□□□□ 0.57
RNF39-201ENST00000244360 RTL8AQ9BWD3 113 aa18.64■□□□□ 0.57
RNF39-201ENST00000244360 ARID1AO14497 2285 aa18.63■□□□□ 0.57
RNF39-201ENST00000244360 SNRNP70P08621 437 aaKnown RBP18.63■□□□□ 0.57
RNF39-201ENST00000244360 CELA3BP08861 270 aa18.63■□□□□ 0.57
RNF39-201ENST00000244360 MMP9P14780 707 aa18.63■□□□□ 0.57
RNF39-201ENST00000244360 PCSK4Q6UW60 755 aa18.63■□□□□ 0.57
RNF39-201ENST00000244360 C17orf78Q8N4C9 275 aa18.63■□□□□ 0.57
RNF39-201ENST00000244360 PLEKHF2Q9H8W4 249 aa18.63■□□□□ 0.57
RNF39-201ENST00000244360 SPAARA0A1B0GVQ0 90 aa18.62■□□□□ 0.57
RNF39-201ENST00000244360 NKX2-6A6NCS4 301 aa18.62■□□□□ 0.57
RNF39-201ENST00000244360 BTBD17A6NE02 478 aa18.62■□□□□ 0.57
RNF39-201ENST00000244360 RHBDL1O75783 438 aa18.62■□□□□ 0.57
RNF39-201ENST00000244360 S100A8P05109 93 aa18.62■□□□□ 0.57
RNF39-201ENST00000244360 CCL11P51671 97 aa18.62■□□□□ 0.57
RNF39-201ENST00000244360 PPP1CBP62140 327 aa18.62■□□□□ 0.57
RNF39-201ENST00000244360 MRPL49Q13405 166 aaKnown RBP18.62■□□□□ 0.57
RNF39-201ENST00000244360 ETV3LQ6ZN32 361 aa18.62■□□□□ 0.57
RNF39-201ENST00000244360 C20orf204Q6ZNR8 217 aa18.62■□□□□ 0.57
RNF39-201ENST00000244360 TMEM182Q6ZP80 229 aaPredicted RBP18.62■□□□□ 0.57
RNF39-201ENST00000244360 FAM214BQ7L5A3 538 aa18.62■□□□□ 0.57
RNF39-201ENST00000244360 GAPTQ8N292 157 aa18.62■□□□□ 0.57
RNF39-201ENST00000244360 DLL3Q9NYJ7 618 aa18.62■□□□□ 0.57
RNF39-201ENST00000244360 PIGBOS1A0A0B4J2F0 54 aa18.62■□□□□ 0.57
RNF39-201ENST00000244360 LRP5LA4QPB2 252 aa18.62■□□□□ 0.57
RNF39-201ENST00000244360 CLEC18AA5D8T8 446 aa18.62■□□□□ 0.57
RNF39-201ENST00000244360 FHITP49789 147 aa18.62■□□□□ 0.57
RNF39-201ENST00000244360 Q6P435 159 aa18.62■□□□□ 0.57
RNF39-201ENST00000244360 WDR86Q86TI4 376 aa18.62■□□□□ 0.57
RNF39-201ENST00000244360 CLEC18CQ8NCF0 446 aa18.62■□□□□ 0.57
RNF39-201ENST00000244360 LYRM2Q9NU23 88 aaPredicted RBP18.62■□□□□ 0.57
RNF39-201ENST00000244360 OTOGLQ3ZCN5 2332 aa18.61■□□□□ 0.57
RNF39-201ENST00000244360 HSPA12AO43301 675 aa18.61■□□□□ 0.57
RNF39-201ENST00000244360 S100A6P06703 90 aa18.61■□□□□ 0.57
RNF39-201ENST00000244360 AGAP20933 346 aa18.61■□□□□ 0.57
RNF39-201ENST00000244360 UBE2NP61088 152 aaKnown RBP18.61■□□□□ 0.57
RNF39-201ENST00000244360 FAM213BQ8TBF2 198 aa18.61■□□□□ 0.57
RNF39-201ENST00000244360 CABLES2Q9BTV7 478 aa18.61■□□□□ 0.57
RNF39-201ENST00000244360 CDH20Q9HBT6 801 aa18.61■□□□□ 0.57
RNF39-201ENST00000244360 CNOT4O95628 575 aaKnown RBP18.61■□□□□ 0.57
RNF39-201ENST00000244360 WT1P19544 449 aaPredicted RBP18.61■□□□□ 0.57
RNF39-201ENST00000244360 SPINK2P20155 84 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms