RNA–Protein interactions for RNA: ENST00000244050.2

SNAI1-201, Transcript of snail family transcriptional repressor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAI1, Length 1,686 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI1-201ENST00000244050 PJVKQ0ZLH3 352 aa10.79□□□□□ -0.68
SNAI1-201ENST00000244050 ZNF273Q14593 569 aa10.79□□□□□ -0.68
SNAI1-201ENST00000244050 HERPUD1Q15011 391 aa10.79□□□□□ -0.68
SNAI1-201ENST00000244050 ZNF880Q6PDB4 577 aa10.79□□□□□ -0.68
SNAI1-201ENST00000244050 FAM58AQ8N1B3 248 aa10.79□□□□□ -0.68
SNAI1-201ENST00000244050 SUMF2Q8NBJ7 301 aa10.79□□□□□ -0.68
SNAI1-201ENST00000244050 UBAC2Q8NBM4 344 aa10.79□□□□□ -0.68
SNAI1-201ENST00000244050 MBD3L2Q8NHZ7 208 aaPredicted RBP10.79□□□□□ -0.68
SNAI1-201ENST00000244050 TMEM56Q96MV1 263 aa10.79□□□□□ -0.68
SNAI1-201ENST00000244050 TP53RKQ96S44 253 aa10.79□□□□□ -0.68
SNAI1-201ENST00000244050 FBXL17Q9UF56 701 aa10.79□□□□□ -0.68
SNAI1-201ENST00000244050 TMEM56-RWDD3S4R434 201 aa10.79□□□□□ -0.68
SNAI1-201ENST00000244050 USP9XQ93008 2570 aaPredicted RBP10.79□□□□□ -0.68
SNAI1-201ENST00000244050 J3QT63 122 aa10.79□□□□□ -0.68
SNAI1-201ENST00000244050 ST8SIA3O43173 380 aa10.79□□□□□ -0.68
SNAI1-201ENST00000244050 GPR137BO60478 399 aa10.79□□□□□ -0.68
SNAI1-201ENST00000244050 SCGB1D2O95969 90 aa10.79□□□□□ -0.68
SNAI1-201ENST00000244050 BLOC1S1P78537 153 aa10.79□□□□□ -0.68
SNAI1-201ENST00000244050 MRPL49Q13405 166 aaKnown RBP10.79□□□□□ -0.68
SNAI1-201ENST00000244050 TSC22D1Q15714 1073 aa10.79□□□□□ -0.68
SNAI1-201ENST00000244050 FAM76BQ5HYJ3 339 aa10.79□□□□□ -0.68
SNAI1-201ENST00000244050 OR2T2Q6IF00 324 aa10.79□□□□□ -0.68
SNAI1-201ENST00000244050 SLC35G3Q8N808 338 aa10.79□□□□□ -0.68
SNAI1-201ENST00000244050 ZNF565Q8N9K5 539 aa10.79□□□□□ -0.68
SNAI1-201ENST00000244050 OR4D5Q8NGN0 318 aa10.79□□□□□ -0.68
SNAI1-201ENST00000244050 MRPL30Q8TCC3 161 aaKnown RBP10.79□□□□□ -0.68
SNAI1-201ENST00000244050 LRRC46Q96FV0 321 aa10.79□□□□□ -0.68
SNAI1-201ENST00000244050 PROCRQ9UNN8 238 aa10.79□□□□□ -0.68
SNAI1-201ENST00000244050 UTP20O75691 2785 aaKnown RBP10.78□□□□□ -0.68
SNAI1-201ENST00000244050 TRAV24A0A0B4J272 114 aa10.78□□□□□ -0.68
SNAI1-201ENST00000244050 IGKV1-6A0A0C4DH72 117 aa10.78□□□□□ -0.68
SNAI1-201ENST00000244050 DUXBA0A1W2PPF3 345 aa10.78□□□□□ -0.68
SNAI1-201ENST00000244050 A0A1W2PR80 420 aa10.78□□□□□ -0.68
SNAI1-201ENST00000244050 TNFSF13O75888 250 aa10.78□□□□□ -0.68
SNAI1-201ENST00000244050 ATG12O94817 140 aa10.78□□□□□ -0.68
SNAI1-201ENST00000244050 HOXB1P14653 301 aaPredicted RBP10.78□□□□□ -0.68
SNAI1-201ENST00000244050 CA6P23280 308 aa10.78□□□□□ -0.68
SNAI1-201ENST00000244050 IL32P24001 234 aa10.78□□□□□ -0.68
SNAI1-201ENST00000244050 HOXC12P31275 282 aa10.78□□□□□ -0.68
SNAI1-201ENST00000244050 GABRA6Q16445 453 aa10.78□□□□□ -0.68
SNAI1-201ENST00000244050 C10orf91Q5T1B1 145 aa10.78□□□□□ -0.68
SNAI1-201ENST00000244050 C1orf185Q5T7R7 199 aa10.78□□□□□ -0.68
SNAI1-201ENST00000244050 PXDC1Q5TGL8 231 aa10.78□□□□□ -0.68
SNAI1-201ENST00000244050 ATRAIDQ6UW56 229 aa10.78□□□□□ -0.68
SNAI1-201ENST00000244050 SEM1Q6ZVN7 128 aa10.78□□□□□ -0.68
SNAI1-201ENST00000244050 TBC1D26Q86UD7 250 aa10.78□□□□□ -0.68
SNAI1-201ENST00000244050 LURAP1LQ8IV03 231 aa10.78□□□□□ -0.68
SNAI1-201ENST00000244050 BOLLQ8N9W6 283 aaKnown RBP10.78□□□□□ -0.68
SNAI1-201ENST00000244050 OR52M1Q8NGK5 317 aa10.78□□□□□ -0.68
SNAI1-201ENST00000244050 OR4A4PQ8NGN8 299 aa10.78□□□□□ -0.68
SNAI1-201ENST00000244050 NEK7Q8TDX7 302 aa10.78□□□□□ -0.68
SNAI1-201ENST00000244050 BOD1Q96IK1 185 aa10.78□□□□□ -0.68
SNAI1-201ENST00000244050 RTL8AQ9BWD3 113 aa10.78□□□□□ -0.68
SNAI1-201ENST00000244050 PLSCR4Q9NRQ2 329 aa10.78□□□□□ -0.68
SNAI1-201ENST00000244050 POMT1Q9Y6A1 747 aa10.78□□□□□ -0.68
SNAI1-201ENST00000244050 TEX15Q9BXT5 2789 aa10.77□□□□□ -0.69
SNAI1-201ENST00000244050 LRP5LA4QPB2 252 aa10.77□□□□□ -0.69
SNAI1-201ENST00000244050 ABCD4O14678 606 aa10.77□□□□□ -0.69
SNAI1-201ENST00000244050 SMPD2O60906 423 aa10.77□□□□□ -0.69
SNAI1-201ENST00000244050 GLI4P10075 376 aa10.77□□□□□ -0.69
SNAI1-201ENST00000244050 RCC1P18754 421 aaPredicted RBP10.77□□□□□ -0.69
SNAI1-201ENST00000244050 DEFA5Q01523 94 aa10.77□□□□□ -0.69
SNAI1-201ENST00000244050 ZNF324BQ6AW86 544 aaPredicted RBP10.77□□□□□ -0.69
SNAI1-201ENST00000244050 Q6P435 159 aa10.77□□□□□ -0.69
SNAI1-201ENST00000244050 ZNF818PQ6ZRF7 136 aa10.77□□□□□ -0.69
SNAI1-201ENST00000244050 Q8IYB0 196 aa10.77□□□□□ -0.69
SNAI1-201ENST00000244050 CISD2Q8N5K1 135 aaKnown RBP10.77□□□□□ -0.69
SNAI1-201ENST00000244050 DMBX1Q8NFW5 382 aa10.77□□□□□ -0.69
SNAI1-201ENST00000244050 FAM57AQ8TBR7 257 aa10.77□□□□□ -0.69
SNAI1-201ENST00000244050 SECTM1Q8WVN6 248 aa10.77□□□□□ -0.69
SNAI1-201ENST00000244050 NARS2Q96I59 477 aaKnown RBP10.77□□□□□ -0.69
SNAI1-201ENST00000244050 ABHD14BQ96IU4 210 aa10.77□□□□□ -0.69
SNAI1-201ENST00000244050 ZNF488Q96MN9 340 aa10.77□□□□□ -0.69
SNAI1-201ENST00000244050 USB1Q9BQ65 265 aaKnown RBP10.77□□□□□ -0.69
SNAI1-201ENST00000244050 PARP11Q9NR21 331 aa10.77□□□□□ -0.69
SNAI1-201ENST00000244050 TREM2Q9NZC2 230 aa10.77□□□□□ -0.69
SNAI1-201ENST00000244050 UBE2J1Q9Y385 318 aaPredicted RBP10.77□□□□□ -0.69
SNAI1-201ENST00000244050 FAM215AQ9Y5M1 114 aa10.77□□□□□ -0.69
SNAI1-201ENST00000244050 BORCS7-ASMTA0A0B4J1R7 106 aa10.76□□□□□ -0.69
SNAI1-201ENST00000244050 IGKV1D-13A0A0B4J2D9 117 aa10.76□□□□□ -0.69
SNAI1-201ENST00000244050 IGKV1-13P0DP09 117 aa10.76□□□□□ -0.69
SNAI1-201ENST00000244050 RAC2P15153 192 aa10.76□□□□□ -0.69
SNAI1-201ENST00000244050 COX5AP20674 150 aa10.76□□□□□ -0.69
SNAI1-201ENST00000244050 UCP1P25874 307 aa10.76□□□□□ -0.69
SNAI1-201ENST00000244050 MDH2P40926 338 aaKnown RBP10.76□□□□□ -0.69
SNAI1-201ENST00000244050 ERVK11-1P61568 191 aa10.76□□□□□ -0.69
SNAI1-201ENST00000244050 PPP1CBP62140 327 aa10.76□□□□□ -0.69
SNAI1-201ENST00000244050 EIF2S3LQ2VIR3 472 aaKnown RBP10.76□□□□□ -0.69
SNAI1-201ENST00000244050 SPIN3Q5JUX0 258 aa10.76□□□□□ -0.69
SNAI1-201ENST00000244050 SHEQ5VZ18 495 aa10.76□□□□□ -0.69
SNAI1-201ENST00000244050 BTNL8Q6UX41 500 aa10.76□□□□□ -0.69
SNAI1-201ENST00000244050 MEX3BQ6ZN04 569 aaKnown RBP10.76□□□□□ -0.69
SNAI1-201ENST00000244050 C20orf204Q6ZNR8 217 aa10.76□□□□□ -0.69
SNAI1-201ENST00000244050 SELENOHQ8IZQ5 122 aaKnown RBP10.76□□□□□ -0.69
SNAI1-201ENST00000244050 GAPTQ8N292 157 aa10.76□□□□□ -0.69
SNAI1-201ENST00000244050 Q8NA96 180 aa10.76□□□□□ -0.69
SNAI1-201ENST00000244050 C1orf162Q8NEQ5 155 aaPredicted RBP10.76□□□□□ -0.69
SNAI1-201ENST00000244050 LYPD6BQ8NI32 183 aa10.76□□□□□ -0.69
SNAI1-201ENST00000244050 IL22RA2Q969J5 263 aa10.76□□□□□ -0.69
SNAI1-201ENST00000244050 ERGIC1Q969X5 290 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms