RNA–Protein interactions for RNA: ENST00000243082.4

HOXC11-201, Transcript of homeobox C11, humanhuman

TSL 3 BASIC

Gene HOXC11, Length 2,039 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-201ENST00000243082 RELL2Q8NC24 303 aaPredicted RBP15.58■□□□□ 0.09
HOXC11-201ENST00000243082 GPHA2Q96T91 129 aa15.58■□□□□ 0.09
HOXC11-201ENST00000243082 TAAR3PQ9P1P4 343 aa15.58■□□□□ 0.09
HOXC11-201ENST00000243082 OR1A1Q9P1Q5 309 aa15.58■□□□□ 0.09
HOXC11-201ENST00000243082 Q9UFV3 132 aa15.58■□□□□ 0.09
HOXC11-201ENST00000243082 DUSP13Q9UII6 198 aa15.58■□□□□ 0.09
HOXC11-201ENST00000243082 MAP1BP46821 2468 aaKnown RBP15.58■□□□□ 0.08
HOXC11-201ENST00000243082 RP1L1Q8IWN7 2480 aaPredicted RBP15.58■□□□□ 0.08
HOXC11-201ENST00000243082 DEDDO75618 318 aa15.58■□□□□ 0.08
HOXC11-201ENST00000243082 IGHV3-13P01766 116 aa15.58■□□□□ 0.08
HOXC11-201ENST00000243082 GLRXP35754 106 aa15.58■□□□□ 0.08
HOXC11-201ENST00000243082 NUP62P37198 522 aaPredicted RBP15.58■□□□□ 0.08
HOXC11-201ENST00000243082 SLC35G3Q8N808 338 aa15.58■□□□□ 0.08
HOXC11-201ENST00000243082 IL1F10Q8WWZ1 152 aa15.58■□□□□ 0.08
HOXC11-201ENST00000243082 PHYHIPLQ96FC7 376 aa15.58■□□□□ 0.08
HOXC11-201ENST00000243082 USB1Q9BQ65 265 aaKnown RBP15.58■□□□□ 0.08
HOXC11-201ENST00000243082 MED9Q9NWA0 146 aa15.58■□□□□ 0.08
HOXC11-201ENST00000243082 FBXO9Q9UK97 447 aaPredicted RBP15.58■□□□□ 0.08
HOXC11-201ENST00000243082 GFRALQ6UXV0 394 aa15.57■□□□□ 0.08
HOXC11-201ENST00000243082 MEX3BQ6ZN04 569 aaKnown RBP15.57■□□□□ 0.08
HOXC11-201ENST00000243082 OR2Z1Q8NG97 314 aa15.57■□□□□ 0.08
HOXC11-201ENST00000243082 STOML3Q8TAV4 291 aa15.57■□□□□ 0.08
HOXC11-201ENST00000243082 PRR7Q8TB68 274 aa15.57■□□□□ 0.08
HOXC11-201ENST00000243082 SNRNP40Q96DI7 357 aaKnown RBP15.57■□□□□ 0.08
HOXC11-201ENST00000243082 TMEM56Q96MV1 263 aa15.57■□□□□ 0.08
HOXC11-201ENST00000243082 REG4Q9BYZ8 158 aa15.57■□□□□ 0.08
HOXC11-201ENST00000243082 SLC25A32Q9H2D1 315 aa15.57■□□□□ 0.08
HOXC11-201ENST00000243082 PIGMQ9H3S5 423 aa15.57■□□□□ 0.08
HOXC11-201ENST00000243082 GLS2Q9UI32 602 aa15.57■□□□□ 0.08
HOXC11-201ENST00000243082 ERRFI1Q9UJM3 462 aaPredicted RBP15.57■□□□□ 0.08
HOXC11-201ENST00000243082 ZNF835Q9Y2P0 537 aa15.57■□□□□ 0.08
HOXC11-201ENST00000243082 SPEF1Q9Y4P9 236 aa15.57■□□□□ 0.08
HOXC11-201ENST00000243082 TMEM56-RWDD3S4R434 201 aa15.57■□□□□ 0.08
HOXC11-201ENST00000243082 ARID1AO14497 2285 aa15.57■□□□□ 0.08
HOXC11-201ENST00000243082 CADP27708 2225 aa15.56■□□□□ 0.08
HOXC11-201ENST00000243082 PTBP3O95758 552 aaKnown RBP15.56■□□□□ 0.08
HOXC11-201ENST00000243082 MBPP02686 304 aaPredicted RBP15.56■□□□□ 0.08
HOXC11-201ENST00000243082 HMGN3Q15651 99 aa15.56■□□□□ 0.08
HOXC11-201ENST00000243082 AANATQ16613 207 aa15.56■□□□□ 0.08
HOXC11-201ENST00000243082 FAM74A1Q5RGS3 127 aa15.56■□□□□ 0.08
HOXC11-201ENST00000243082 TMEM268Q5VZI3 342 aa15.56■□□□□ 0.08
HOXC11-201ENST00000243082 PDZD9Q8IXQ8 264 aa15.56■□□□□ 0.08
HOXC11-201ENST00000243082 SHARPINQ9H0F6 387 aa15.56■□□□□ 0.08
HOXC11-201ENST00000243082 TMED3Q9Y3Q3 217 aa15.56■□□□□ 0.08
HOXC11-201ENST00000243082 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP15.56■□□□□ 0.08
HOXC11-201ENST00000243082 PGLYRP1O75594 196 aaPredicted RBP15.56■□□□□ 0.08
HOXC11-201ENST00000243082 TFF1P04155 84 aa15.56■□□□□ 0.08
HOXC11-201ENST00000243082 HKR1P10072 659 aa15.56■□□□□ 0.08
HOXC11-201ENST00000243082 CCKARP32238 428 aa15.56■□□□□ 0.08
HOXC11-201ENST00000243082 CD200P41217 278 aa15.56■□□□□ 0.08
HOXC11-201ENST00000243082 SRPXP78539 464 aa15.56■□□□□ 0.08
HOXC11-201ENST00000243082 MZT1Q08AG7 82 aa15.56■□□□□ 0.08
HOXC11-201ENST00000243082 TESK1Q15569 626 aa15.56■□□□□ 0.08
HOXC11-201ENST00000243082 PRR30Q53SZ7 412 aaPredicted RBP15.56■□□□□ 0.08
HOXC11-201ENST00000243082 TOR2AQ5JU69 321 aa15.56■□□□□ 0.08
HOXC11-201ENST00000243082 MRGPRGQ86SM5 289 aa15.56■□□□□ 0.08
HOXC11-201ENST00000243082 PRR18Q8N4B5 295 aa15.56■□□□□ 0.08
HOXC11-201ENST00000243082 OR52M1Q8NGK5 317 aa15.56■□□□□ 0.08
HOXC11-201ENST00000243082 TMEM171Q8WVE6 324 aa15.56■□□□□ 0.08
HOXC11-201ENST00000243082 UBE2J1Q9Y385 318 aaPredicted RBP15.56■□□□□ 0.08
HOXC11-201ENST00000243082 LSM5Q9Y4Y9 91 aaKnown RBP15.56■□□□□ 0.08
HOXC11-201ENST00000243082 hCG_1807616A0A1W2PRN6 198 aa15.55■□□□□ 0.08
HOXC11-201ENST00000243082 ZSCAN5BA6NJL1 495 aa15.55■□□□□ 0.08
HOXC11-201ENST00000243082 ATP6V1G2-DDX39BF2Z307 99 aa15.55■□□□□ 0.08
HOXC11-201ENST00000243082 SCGB1D2O95969 90 aa15.55■□□□□ 0.08
HOXC11-201ENST00000243082 CMTM1Q8IZ96 169 aa15.55■□□□□ 0.08
HOXC11-201ENST00000243082 SELENOHQ8IZQ5 122 aaKnown RBP15.55■□□□□ 0.08
HOXC11-201ENST00000243082 BVESQ8NE79 360 aa15.55■□□□□ 0.08
HOXC11-201ENST00000243082 UBALD1Q8TB05 177 aa15.55■□□□□ 0.08
HOXC11-201ENST00000243082 TAF9BQ9HBM6 251 aa15.55■□□□□ 0.08
HOXC11-201ENST00000243082 ZGRF1Q86YA3 2104 aa15.55■□□□□ 0.08
HOXC11-201ENST00000243082 IGLV3-9A0A075B6K5 115 aa15.55■□□□□ 0.08
HOXC11-201ENST00000243082 K7EPK0 472 aa15.55■□□□□ 0.08
HOXC11-201ENST00000243082 CDS2O95674 445 aa15.55■□□□□ 0.08
HOXC11-201ENST00000243082 UCP1P25874 307 aa15.55■□□□□ 0.08
HOXC11-201ENST00000243082 KLF3P57682 345 aaPredicted RBP15.55■□□□□ 0.08
HOXC11-201ENST00000243082 SMCO1Q147U7 214 aa15.55■□□□□ 0.08
HOXC11-201ENST00000243082 C1QTNF12Q5T7M4 302 aa15.55■□□□□ 0.08
HOXC11-201ENST00000243082 VHLLQ6RSH7 139 aa15.55■□□□□ 0.08
HOXC11-201ENST00000243082 FAM71E2Q8N5Q1 922 aa15.55■□□□□ 0.08
HOXC11-201ENST00000243082 LILRB1Q8NHL6 650 aaPredicted RBP15.55■□□□□ 0.08
HOXC11-201ENST00000243082 LRRC29Q8WV35 223 aa15.55■□□□□ 0.08
HOXC11-201ENST00000243082 ASF1BQ9NVP2 202 aa15.55■□□□□ 0.08
HOXC11-201ENST00000243082 TMEM30CPA0ZSE6 113 aa15.54■□□□□ 0.08
HOXC11-201ENST00000243082 MFSD2BA6NFX1 497 aa15.54■□□□□ 0.08
HOXC11-201ENST00000243082 TNFSF12O43508 249 aa15.54■□□□□ 0.08
HOXC11-201ENST00000243082 HEXAP06865 529 aa15.54■□□□□ 0.08
HOXC11-201ENST00000243082 FAM87AP0C7U9 286 aa15.54■□□□□ 0.08
HOXC11-201ENST00000243082 P2RX3P56373 397 aa15.54■□□□□ 0.08
HOXC11-201ENST00000243082 SNTB1Q13884 538 aaKnown RBP15.54■□□□□ 0.08
HOXC11-201ENST00000243082 SMIM21Q3B7S5 101 aa15.54■□□□□ 0.08
HOXC11-201ENST00000243082 SLC35E4Q6ICL7 350 aa15.54■□□□□ 0.08
HOXC11-201ENST00000243082 OR10V1Q8NGI7 309 aa15.54■□□□□ 0.08
HOXC11-201ENST00000243082 MARVELD3Q96A59 401 aa15.54■□□□□ 0.08
HOXC11-201ENST00000243082 METRNQ9UJH8 293 aa15.54■□□□□ 0.08
HOXC11-201ENST00000243082 I3L521 148 aa15.53■□□□□ 0.08
HOXC11-201ENST00000243082 IFNL4K9M1U5 179 aa15.53■□□□□ 0.08
HOXC11-201ENST00000243082 IGLV2-14P01704 120 aa15.53■□□□□ 0.08
HOXC11-201ENST00000243082 TPT1P13693 172 aaKnown RBP15.53■□□□□ 0.08
HOXC11-201ENST00000243082 RPL12P30050 165 aaKnown RBP15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms