RNA–Protein interactions for RNA: ENST00000242285.10

CLTA-201, Transcript of clathrin light chain A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CLTA, Length 1,152 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTA-201ENST00000242285 HSD17B12Q53GQ0 312 aa13.48□□□□□ -0.25
CLTA-201ENST00000242285 ATAD3CQ5T2N8 411 aa13.48□□□□□ -0.25
CLTA-201ENST00000242285 BRICD5Q6PL45 260 aa13.48□□□□□ -0.25
CLTA-201ENST00000242285 BAIAP2L2Q6UXY1 529 aa13.48□□□□□ -0.25
CLTA-201ENST00000242285 ZNF497Q6ZNH5 498 aa13.48□□□□□ -0.25
CLTA-201ENST00000242285 C16orf82Q7Z2V1 217 aa13.48□□□□□ -0.25
CLTA-201ENST00000242285 CEACAM19Q7Z692 300 aa13.48□□□□□ -0.25
CLTA-201ENST00000242285 Q8N2B8 174 aa13.48□□□□□ -0.25
CLTA-201ENST00000242285 OR52M1Q8NGK5 317 aa13.48□□□□□ -0.25
CLTA-201ENST00000242285 CNBD2Q96M20 576 aa13.48□□□□□ -0.25
CLTA-201ENST00000242285 ZNF581Q9P0T4 197 aa13.48□□□□□ -0.25
CLTA-201ENST00000242285 AMMECR1Q9Y4X0 333 aaPredicted RBP13.48□□□□□ -0.25
CLTA-201ENST00000242285 HILPDAQ9Y5L2 63 aa13.48□□□□□ -0.25
CLTA-201ENST00000242285 MCRIP1C9JLW8 97 aa13.47□□□□□ -0.25
CLTA-201ENST00000242285 LY6LH3BQJ8 138 aa13.47□□□□□ -0.25
CLTA-201ENST00000242285 BUB1B-PAK6H3BSN5 160 aa13.47□□□□□ -0.25
CLTA-201ENST00000242285 F2RL2O00254 374 aa13.47□□□□□ -0.25
CLTA-201ENST00000242285 BRS3P32247 399 aa13.47□□□□□ -0.25
CLTA-201ENST00000242285 EFNB2P52799 333 aa13.47□□□□□ -0.25
CLTA-201ENST00000242285 GABARAPL2P60520 117 aa13.47□□□□□ -0.25
CLTA-201ENST00000242285 TMEM30BQ3MIR4 351 aa13.47□□□□□ -0.25
CLTA-201ENST00000242285 Q3ZCU0 254 aa13.47□□□□□ -0.25
CLTA-201ENST00000242285 FAM27D1Q5T7N8 215 aa13.47□□□□□ -0.25
CLTA-201ENST00000242285 CCDC144NLQ6NUI1 221 aa13.47□□□□□ -0.25
CLTA-201ENST00000242285 CCBE1Q6UXH8 406 aaPredicted RBP13.47□□□□□ -0.25
CLTA-201ENST00000242285 MRGPRDQ8TDS7 321 aa13.47□□□□□ -0.25
CLTA-201ENST00000242285 MGLLQ99685 303 aa13.47□□□□□ -0.25
CLTA-201ENST00000242285 SELENOIQ9C0D9 397 aa13.47□□□□□ -0.25
CLTA-201ENST00000242285 CCDC90BQ9GZT6 254 aa13.47□□□□□ -0.25
CLTA-201ENST00000242285 MMP28Q9H239 520 aa13.47□□□□□ -0.25
CLTA-201ENST00000242285 RAB9BQ9NP90 201 aa13.47□□□□□ -0.25
CLTA-201ENST00000242285 VWFP04275 2813 aa13.47□□□□□ -0.25
CLTA-201ENST00000242285 J3QR06 171 aa13.46□□□□□ -0.25
CLTA-201ENST00000242285 CRTAPO75718 401 aaPredicted RBP13.46□□□□□ -0.25
CLTA-201ENST00000242285 ARL6IP5O75915 188 aa13.46□□□□□ -0.25
CLTA-201ENST00000242285 MT-ND4P03905 459 aa13.46□□□□□ -0.25
CLTA-201ENST00000242285 FUT3P21217 361 aa13.46□□□□□ -0.25
CLTA-201ENST00000242285 RANBP1P43487 201 aa13.46□□□□□ -0.25
CLTA-201ENST00000242285 TPTE2P1Q5T6R2 138 aa13.46□□□□□ -0.25
CLTA-201ENST00000242285 RAB12Q6IQ22 244 aa13.46□□□□□ -0.25
CLTA-201ENST00000242285 TRAT1Q6PIZ9 186 aa13.46□□□□□ -0.25
CLTA-201ENST00000242285 TMEM91Q6ZNR0 172 aa13.46□□□□□ -0.25
CLTA-201ENST00000242285 ZNF367Q7RTV3 350 aa13.46□□□□□ -0.25
CLTA-201ENST00000242285 ZNF554Q86TJ5 538 aa13.46□□□□□ -0.25
CLTA-201ENST00000242285 C8orf31Q8N9H6 132 aa13.46□□□□□ -0.25
CLTA-201ENST00000242285 TMEM104Q8NE00 496 aa13.46□□□□□ -0.25
CLTA-201ENST00000242285 OR2T6Q8NHC8 308 aa13.46□□□□□ -0.25
CLTA-201ENST00000242285 Q9H521 79 aa13.46□□□□□ -0.25
CLTA-201ENST00000242285 C15orf65H3BRN8 121 aa13.45□□□□□ -0.26
CLTA-201ENST00000242285 SLC22A1O15245 554 aa13.45□□□□□ -0.26
CLTA-201ENST00000242285 DENRO43583 198 aaKnown RBP13.45□□□□□ -0.26
CLTA-201ENST00000242285 HSMCR30P0CW71 290 aa13.45□□□□□ -0.26
CLTA-201ENST00000242285 NFYBP25208 207 aa13.45□□□□□ -0.26
CLTA-201ENST00000242285 HTR2CP28335 458 aa13.45□□□□□ -0.26
CLTA-201ENST00000242285 SSTR5P35346 364 aa13.45□□□□□ -0.26
CLTA-201ENST00000242285 RAB13P51153 203 aa13.45□□□□□ -0.26
CLTA-201ENST00000242285 KRTAP10-3P60369 221 aa13.45□□□□□ -0.26
CLTA-201ENST00000242285 PLA1AQ53H76 456 aa13.45□□□□□ -0.26
CLTA-201ENST00000242285 SIGIRRQ6IA17 410 aa13.45□□□□□ -0.26
CLTA-201ENST00000242285 OR6M1Q8NGM8 313 aa13.45□□□□□ -0.26
CLTA-201ENST00000242285 KCNG3Q8TAE7 436 aa13.45□□□□□ -0.26
CLTA-201ENST00000242285 NEK7Q8TDX7 302 aa13.45□□□□□ -0.26
CLTA-201ENST00000242285 YTHDF1Q9BYJ9 559 aaKnown RBP13.45□□□□□ -0.26
CLTA-201ENST00000242285 BANF2Q9H503 90 aa13.45□□□□□ -0.26
CLTA-201ENST00000242285 ACOT13Q9NPJ3 140 aa13.45□□□□□ -0.26
CLTA-201ENST00000242285 PSG11Q9UQ72 335 aa13.45□□□□□ -0.26
CLTA-201ENST00000242285 FAM172BPA6NC97 362 aa13.44□□□□□ -0.26
CLTA-201ENST00000242285 AIPO00170 330 aa13.44□□□□□ -0.26
CLTA-201ENST00000242285 PDCD6O75340 191 aa13.44□□□□□ -0.26
CLTA-201ENST00000242285 BPNT1O95861 308 aa13.44□□□□□ -0.26
CLTA-201ENST00000242285 RPS25P62851 125 aaKnown RBP13.44□□□□□ -0.26
CLTA-201ENST00000242285 C6orf183Q5T699 404 aa13.44□□□□□ -0.26
CLTA-201ENST00000242285 LINC00311Q8N616 119 aa13.44□□□□□ -0.26
CLTA-201ENST00000242285 AKR1E2Q96JD6 320 aa13.44□□□□□ -0.26
CLTA-201ENST00000242285 TM2D1Q9BX74 207 aa13.44□□□□□ -0.26
CLTA-201ENST00000242285 TMEM59Q9BXS4 323 aa13.44□□□□□ -0.26
CLTA-201ENST00000242285 PRSS22Q9GZN4 317 aa13.44□□□□□ -0.26
CLTA-201ENST00000242285 ZNF702PQ9H963 129 aa13.44□□□□□ -0.26
CLTA-201ENST00000242285 LIN7BQ9HAP6 207 aa13.44□□□□□ -0.26
CLTA-201ENST00000242285 ETAA1Q9NY74 926 aa13.44□□□□□ -0.26
CLTA-201ENST00000242285 PEX16Q9Y5Y5 336 aa13.44□□□□□ -0.26
CLTA-201ENST00000242285 PLXNB1O43157 2135 aa13.43□□□□□ -0.26
CLTA-201ENST00000242285 SLC17A2O00624 439 aa13.43□□□□□ -0.26
CLTA-201ENST00000242285 VSIG8P0DPA2 414 aa13.43□□□□□ -0.26
CLTA-201ENST00000242285 MNDAP41218 407 aa13.43□□□□□ -0.26
CLTA-201ENST00000242285 MAP2K4P45985 399 aa13.43□□□□□ -0.26
CLTA-201ENST00000242285 LOXL3P58215 753 aa13.43□□□□□ -0.26
CLTA-201ENST00000242285 RPS27AP62979 156 aaKnown RBP13.43□□□□□ -0.26
CLTA-201ENST00000242285 QRFPP83859 136 aa13.43□□□□□ -0.26
CLTA-201ENST00000242285 SRSF4Q08170 494 aaKnown RBP13.43□□□□□ -0.26
CLTA-201ENST00000242285 MADCAM1Q13477 382 aa13.43□□□□□ -0.26
CLTA-201ENST00000242285 UTF1Q5T230 341 aa13.43□□□□□ -0.26
CLTA-201ENST00000242285 TMEM219Q86XT9 240 aa13.43□□□□□ -0.26
CLTA-201ENST00000242285 THNSL2Q86YJ6 484 aa13.43□□□□□ -0.26
CLTA-201ENST00000242285 RFESDQ8TAC1 157 aa13.43□□□□□ -0.26
CLTA-201ENST00000242285 ARL11Q969Q4 196 aa13.43□□□□□ -0.26
CLTA-201ENST00000242285 TMEM203Q969S6 136 aa13.43□□□□□ -0.26
CLTA-201ENST00000242285 RPEQ96AT9 228 aa13.43□□□□□ -0.26
CLTA-201ENST00000242285 MBNL3Q9NUK0 354 aaKnown RBP13.43□□□□□ -0.26
CLTA-201ENST00000242285 NOTCH1P46531 2555 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms