RNA–Protein interactions for RNA: ENST00000221554.12

CCDC130-201, Transcript of coiled-coil domain containing 130, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC130, Length 1,792 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130-201ENST00000221554 AKR1E2Q96JD6 320 aa17.93■□□□□ 0.46
CCDC130-201ENST00000221554 DEFB127Q9H1M4 99 aa17.93■□□□□ 0.46
CCDC130-201ENST00000221554 CCL28Q9NRJ3 127 aa17.93■□□□□ 0.46
CCDC130-201ENST00000221554 MLXQ9UH92 298 aa17.93■□□□□ 0.46
CCDC130-201ENST00000221554 IGKV1-6A0A0C4DH72 117 aa17.92■□□□□ 0.46
CCDC130-201ENST00000221554 HSD17B6O14756 317 aa17.92■□□□□ 0.46
CCDC130-201ENST00000221554 ADAM20O43506 726 aa17.92■□□□□ 0.46
CCDC130-201ENST00000221554 ZNF616Q08AN1 781 aa17.92■□□□□ 0.46
CCDC130-201ENST00000221554 OR8G1Q15617 311 aa17.92■□□□□ 0.46
CCDC130-201ENST00000221554 C3AR1Q16581 482 aa17.92■□□□□ 0.46
CCDC130-201ENST00000221554 GUK1Q16774 197 aa17.92■□□□□ 0.46
CCDC130-201ENST00000221554 ZNF324BQ6AW86 544 aaPredicted RBP17.92■□□□□ 0.46
CCDC130-201ENST00000221554 TMEM88Q6PEY1 159 aa17.92■□□□□ 0.46
CCDC130-201ENST00000221554 GNPNAT1Q96EK6 184 aaPredicted RBP17.92■□□□□ 0.46
CCDC130-201ENST00000221554 SMCO4Q9NRQ5 59 aa17.92■□□□□ 0.46
CCDC130-201ENST00000221554 IL36RNQ9UBH0 155 aa17.92■□□□□ 0.46
CCDC130-201ENST00000221554 LIPGQ9Y5X9 500 aa17.92■□□□□ 0.46
CCDC130-201ENST00000221554 IGKV1D-13A0A0B4J2D9 117 aa17.91■□□□□ 0.46
CCDC130-201ENST00000221554 A0A1B0GU03 582 aa17.91■□□□□ 0.46
CCDC130-201ENST00000221554 BTBD17A6NE02 478 aa17.91■□□□□ 0.46
CCDC130-201ENST00000221554 AGPAT2O15120 278 aa17.91■□□□□ 0.46
CCDC130-201ENST00000221554 IGKV1-13P0DP09 117 aa17.91■□□□□ 0.46
CCDC130-201ENST00000221554 CA6P23280 308 aa17.91■□□□□ 0.46
CCDC130-201ENST00000221554 OR2T2Q6IF00 324 aa17.91■□□□□ 0.46
CCDC130-201ENST00000221554 P4HA3Q7Z4N8 544 aa17.91■□□□□ 0.46
CCDC130-201ENST00000221554 TMEM252Q8N6L7 170 aa17.91■□□□□ 0.46
CCDC130-201ENST00000221554 LILRB1Q8NHL6 650 aaPredicted RBP17.91■□□□□ 0.46
CCDC130-201ENST00000221554 WRBO00258 174 aa17.91■□□□□ 0.46
CCDC130-201ENST00000221554 HSPB6O14558 160 aa17.91■□□□□ 0.46
CCDC130-201ENST00000221554 HS3ST1O14792 307 aa17.91■□□□□ 0.46
CCDC130-201ENST00000221554 UBE2NP61088 152 aaKnown RBP17.91■□□□□ 0.46
CCDC130-201ENST00000221554 POLR2GP62487 172 aaKnown RBP eCLIP17.91■□□□□ 0.46
CCDC130-201ENST00000221554 GABRA6Q16445 453 aa17.91■□□□□ 0.46
CCDC130-201ENST00000221554 CLEC9AQ6UXN8 241 aa17.91■□□□□ 0.46
CCDC130-201ENST00000221554 CDH20Q9HBT6 801 aa17.91■□□□□ 0.46
CCDC130-201ENST00000221554 FAM24AA6NFZ4 105 aa17.9■□□□□ 0.46
CCDC130-201ENST00000221554 CNOT4O95628 575 aaKnown RBP17.9■□□□□ 0.46
CCDC130-201ENST00000221554 ACAA1P09110 424 aaPredicted RBP17.9■□□□□ 0.46
CCDC130-201ENST00000221554 RAC2P15153 192 aa17.9■□□□□ 0.46
CCDC130-201ENST00000221554 ZNF44P15621 663 aa17.9■□□□□ 0.46
CCDC130-201ENST00000221554 ZNF14P17017 642 aaPredicted RBP17.9■□□□□ 0.46
CCDC130-201ENST00000221554 LMO1P25800 156 aa17.9■□□□□ 0.46
CCDC130-201ENST00000221554 Q6P435 159 aa17.9■□□□□ 0.46
CCDC130-201ENST00000221554 CBLN2Q8IUK8 224 aa17.9■□□□□ 0.46
CCDC130-201ENST00000221554 RDH5Q92781 318 aa17.9■□□□□ 0.46
CCDC130-201ENST00000221554 ADAT1Q9BUB4 502 aaKnown RBP17.9■□□□□ 0.46
CCDC130-201ENST00000221554 SPRR3Q9UBC9 169 aa17.9■□□□□ 0.46
CCDC130-201ENST00000221554 SPTBN2O15020 2390 aa17.9■□□□□ 0.46
CCDC130-201ENST00000221554 TMEM210A6NLX4 147 aa17.89■□□□□ 0.45
CCDC130-201ENST00000221554 SERPINE2P07093 398 aa17.89■□□□□ 0.45
CCDC130-201ENST00000221554 INO80CQ6PI98 192 aaPredicted RBP17.89■□□□□ 0.45
CCDC130-201ENST00000221554 HSD17B11Q8NBQ5 300 aa17.89■□□□□ 0.45
CCDC130-201ENST00000221554 OR10V1Q8NGI7 309 aa17.89■□□□□ 0.45
CCDC130-201ENST00000221554 OR10Z1Q8NGY1 313 aa17.89■□□□□ 0.45
CCDC130-201ENST00000221554 CNTRLQ7Z7A1 2325 aa17.89■□□□□ 0.45
CCDC130-201ENST00000221554 IGSF23A1L1A6 192 aa17.89■□□□□ 0.45
CCDC130-201ENST00000221554 K7N7A8 449 aa17.89■□□□□ 0.45
CCDC130-201ENST00000221554 SSSCA1O60232 199 aa17.89■□□□□ 0.45
CCDC130-201ENST00000221554 TUBG1P23258 451 aa17.89■□□□□ 0.45
CCDC130-201ENST00000221554 CD200P41217 278 aa17.89■□□□□ 0.45
CCDC130-201ENST00000221554 PPP1CBP62140 327 aa17.89■□□□□ 0.45
CCDC130-201ENST00000221554 TGIF1Q15583 401 aa17.89■□□□□ 0.45
CCDC130-201ENST00000221554 FIP1L1Q6UN15 594 aaKnown RBP17.89■□□□□ 0.45
CCDC130-201ENST00000221554 C15orf54Q8N8G6 183 aa17.89■□□□□ 0.45
CCDC130-201ENST00000221554 WNT2BQ93097 391 aa17.89■□□□□ 0.45
CCDC130-201ENST00000221554 LSM10Q969L4 123 aaKnown RBP17.89■□□□□ 0.45
CCDC130-201ENST00000221554 EIF5A2Q9GZV4 153 aaKnown RBP17.89■□□□□ 0.45
CCDC130-201ENST00000221554 TUBG2Q9NRH3 451 aa17.89■□□□□ 0.45
CCDC130-201ENST00000221554 ARGFXA6NJG6 315 aa17.88■□□□□ 0.45
CCDC130-201ENST00000221554 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP17.88■□□□□ 0.45
CCDC130-201ENST00000221554 SH2D1BO14796 132 aa17.88■□□□□ 0.45
CCDC130-201ENST00000221554 NDUFA2O43678 99 aa17.88■□□□□ 0.45
CCDC130-201ENST00000221554 DFFBO76075 338 aa17.88■□□□□ 0.45
CCDC130-201ENST00000221554 F12P00748 615 aaPredicted RBP17.88■□□□□ 0.45
CCDC130-201ENST00000221554 ERVK11-1P61568 191 aa17.88■□□□□ 0.45
CCDC130-201ENST00000221554 CXorf66Q5JRM2 361 aaPredicted RBP17.88■□□□□ 0.45
CCDC130-201ENST00000221554 DPPA3Q6W0C5 159 aa17.88■□□□□ 0.45
CCDC130-201ENST00000221554 ZNF488Q96MN9 340 aa17.88■□□□□ 0.45
CCDC130-201ENST00000221554 RAB40CQ96S21 281 aa17.88■□□□□ 0.45
CCDC130-201ENST00000221554 ERRFI1Q9UJM3 462 aaPredicted RBP17.88■□□□□ 0.45
CCDC130-201ENST00000221554 SHANK1Q9Y566 2161 aa17.87■□□□□ 0.45
CCDC130-201ENST00000221554 ARHGAP21Q5T5U3 1957 aa17.87■□□□□ 0.45
CCDC130-201ENST00000221554 SMPD2O60906 423 aa17.87■□□□□ 0.45
CCDC130-201ENST00000221554 LILRA1O75019 489 aa17.87■□□□□ 0.45
CCDC130-201ENST00000221554 CEACAM1P13688 526 aa17.87■□□□□ 0.45
CCDC130-201ENST00000221554 ID4P47928 161 aa17.87■□□□□ 0.45
CCDC130-201ENST00000221554 PPT1P50897 306 aa17.87■□□□□ 0.45
CCDC130-201ENST00000221554 NOVA1P51513 510 aaKnown RBP17.87■□□□□ 0.45
CCDC130-201ENST00000221554 RPL23AP62750 156 aaKnown RBP17.87■□□□□ 0.45
CCDC130-201ENST00000221554 AVPI1Q5T686 147 aa17.87■□□□□ 0.45
CCDC130-201ENST00000221554 ZNF497Q6ZNH5 498 aa17.87■□□□□ 0.45
CCDC130-201ENST00000221554 C20orf204Q6ZNR8 217 aa17.87■□□□□ 0.45
CCDC130-201ENST00000221554 OR2G3Q8NGZ4 309 aa17.87■□□□□ 0.45
CCDC130-201ENST00000221554 SCRT1Q9BWW7 348 aa17.87■□□□□ 0.45
CCDC130-201ENST00000221554 TUBA4BQ9H853 241 aa17.87■□□□□ 0.45
CCDC130-201ENST00000221554 IQCF6A8MYZ5 107 aa17.86■□□□□ 0.45
CCDC130-201ENST00000221554 C9JQL5 133 aa17.86■□□□□ 0.45
CCDC130-201ENST00000221554 IGHG3P01860 377 aa17.86■□□□□ 0.45
CCDC130-201ENST00000221554 TNFSF10P50591 281 aa17.86■□□□□ 0.45
CCDC130-201ENST00000221554 ZNF146Q15072 292 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms