RNA–Protein interactions for RNA: ENST00000219084.10

CHD9-201, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best)

Gene CHD9, Length 8,739 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-201ENST00000219084 KIAA1324LA8MWY0 1029 aaPredicted RBP3.88□□□□□ -1.79
CHD9-201ENST00000219084 ADAP1O75689 374 aa3.88□□□□□ -1.79
CHD9-201ENST00000219084 APCSP02743 223 aa3.88□□□□□ -1.79
CHD9-201ENST00000219084 TSPAN7P41732 249 aa3.88□□□□□ -1.79
CHD9-201ENST00000219084 RNASEKQ6P5S7 137 aaKnown RBP3.88□□□□□ -1.79
CHD9-201ENST00000219084 INO80CQ6PI98 192 aaPredicted RBP3.88□□□□□ -1.79
CHD9-201ENST00000219084 TMEM91Q6ZNR0 172 aa3.88□□□□□ -1.79
CHD9-201ENST00000219084 ETFBKMTQ8IXQ9 262 aa3.88□□□□□ -1.79
CHD9-201ENST00000219084 MYEOVQ96EZ4 313 aa3.88□□□□□ -1.79
CHD9-201ENST00000219084 OR2V2Q96R30 315 aa3.88□□□□□ -1.79
CHD9-201ENST00000219084 GGACTQ9BVM4 153 aa3.88□□□□□ -1.79
CHD9-201ENST00000219084 SLC26A1Q9H2B4 701 aa3.88□□□□□ -1.79
CHD9-201ENST00000219084 WNT16Q9UBV4 365 aa3.88□□□□□ -1.79
CHD9-201ENST00000219084 ZNF230Q9UIE0 474 aaPredicted RBP3.88□□□□□ -1.79
CHD9-201ENST00000219084 PLCE1Q9P212 2302 aa3.88□□□□□ -1.79
CHD9-201ENST00000219084 TRBV5-7A0A0A0MS05 114 aa3.88□□□□□ -1.79
CHD9-201ENST00000219084 P01737 135 aa3.88□□□□□ -1.79
CHD9-201ENST00000219084 SLC25A5P05141 298 aaKnown RBP3.88□□□□□ -1.79
CHD9-201ENST00000219084 TMEM50BP56557 158 aa3.88□□□□□ -1.79
CHD9-201ENST00000219084 RPS20P60866 119 aaKnown RBP3.88□□□□□ -1.79
CHD9-201ENST00000219084 EWSR1Q01844 656 aaKnown RBP eCLIP3.88□□□□□ -1.79
CHD9-201ENST00000219084 OR1C1Q15619 314 aa3.88□□□□□ -1.79
CHD9-201ENST00000219084 NRN1LQ496H8 165 aa3.88□□□□□ -1.79
CHD9-201ENST00000219084 VHLLQ6RSH7 139 aa3.88□□□□□ -1.79
CHD9-201ENST00000219084 TMEM108Q6UXF1 575 aa3.88□□□□□ -1.79
CHD9-201ENST00000219084 RCC2Q9P258 522 aaKnown RBP3.88□□□□□ -1.79
CHD9-201ENST00000219084 HCSTQ9UBK5 93 aa3.88□□□□□ -1.79
CHD9-201ENST00000219084 ZNF835Q9Y2P0 537 aa3.88□□□□□ -1.79
CHD9-201ENST00000219084 SCO1O75880 301 aa3.88□□□□□ -1.79
CHD9-201ENST00000219084 DXOO77932 396 aaKnown RBP3.88□□□□□ -1.79
CHD9-201ENST00000219084 AREGP15514 252 aa3.88□□□□□ -1.79
CHD9-201ENST00000219084 PI3P19957 117 aa3.88□□□□□ -1.79
CHD9-201ENST00000219084 NHLH1Q02575 133 aa3.88□□□□□ -1.79
CHD9-201ENST00000219084 NHLH2Q02577 135 aa3.88□□□□□ -1.79
CHD9-201ENST00000219084 HLA-DRB5Q30154 266 aa3.88□□□□□ -1.79
CHD9-201ENST00000219084 PLPPR5Q32ZL2 321 aa3.88□□□□□ -1.79
CHD9-201ENST00000219084 UNQ9370/PRO34162Q6UXP9 181 aa3.88□□□□□ -1.79
CHD9-201ENST00000219084 OR5AS1Q8N127 324 aa3.88□□□□□ -1.79
CHD9-201ENST00000219084 TM4SF19Q96DZ7 209 aa3.88□□□□□ -1.79
CHD9-201ENST00000219084 IL36GQ9NZH8 169 aa3.88□□□□□ -1.79
CHD9-201ENST00000219084 H0Y8X5 98 aa3.88□□□□□ -1.79
CHD9-201ENST00000219084 M0R1B8 84 aa3.88□□□□□ -1.79
CHD9-201ENST00000219084 SMPD2O60906 423 aa3.88□□□□□ -1.79
CHD9-201ENST00000219084 GABRG2P18507 467 aa3.88□□□□□ -1.79
CHD9-201ENST00000219084 CCR2P41597 374 aa3.88□□□□□ -1.79
CHD9-201ENST00000219084 MEF2BQ02080 365 aaPredicted RBP3.88□□□□□ -1.79
CHD9-201ENST00000219084 ZNF468Q5VIY5 522 aaPredicted RBP3.88□□□□□ -1.79
CHD9-201ENST00000219084 FAM27BQ5VT28 67 aa3.88□□□□□ -1.79
CHD9-201ENST00000219084 OLIG3Q7RTU3 272 aa3.88□□□□□ -1.79
CHD9-201ENST00000219084 C6orf201Q7Z4U5 140 aa3.88□□□□□ -1.79
CHD9-201ENST00000219084 TDHQ8IZJ6 230 aa3.88□□□□□ -1.79
CHD9-201ENST00000219084 OR10AD1Q8NGE0 317 aa3.88□□□□□ -1.79
CHD9-201ENST00000219084 OR10D3Q8NH80 312 aa3.88□□□□□ -1.79
CHD9-201ENST00000219084 TMEM230Q96A57 120 aa3.88□□□□□ -1.79
CHD9-201ENST00000219084 R3HDM4Q96D70 268 aa3.88□□□□□ -1.79
CHD9-201ENST00000219084 ALKBH3Q96Q83 286 aaPredicted RBP3.88□□□□□ -1.79
CHD9-201ENST00000219084 OR2H1Q9GZK4 316 aa3.88□□□□□ -1.79
CHD9-201ENST00000219084 C1RLQ9NZP8 487 aa3.88□□□□□ -1.79
CHD9-201ENST00000219084 PCNX2A6NKB5 2137 aa3.88□□□□□ -1.79
CHD9-201ENST00000219084 COL4A1P02462 1669 aa3.88□□□□□ -1.79
CHD9-201ENST00000219084 HPXP02790 462 aa3.88□□□□□ -1.79
CHD9-201ENST00000219084 NMBP08949 121 aa3.88□□□□□ -1.79
CHD9-201ENST00000219084 RBM11P57052 281 aaKnown RBP3.88□□□□□ -1.79
CHD9-201ENST00000219084 ZNF273Q14593 569 aa3.88□□□□□ -1.79
CHD9-201ENST00000219084 LINC00696Q6ZRV3 163 aa3.88□□□□□ -1.79
CHD9-201ENST00000219084 ZNF645Q8N7E2 425 aa3.88□□□□□ -1.79
CHD9-201ENST00000219084 ZNF738Q8NE65 137 aa3.88□□□□□ -1.79
CHD9-201ENST00000219084 OR11G2Q8NGC1 345 aa3.88□□□□□ -1.79
CHD9-201ENST00000219084 PRSS3P2Q8NHM4 247 aa3.88□□□□□ -1.79
CHD9-201ENST00000219084 SPACA5Q96QH8 159 aa3.88□□□□□ -1.79
CHD9-201ENST00000219084 SERGEFQ9UGK8 458 aa3.88□□□□□ -1.79
CHD9-201ENST00000219084 CARHSP1Q9Y2V2 147 aaKnown RBP3.88□□□□□ -1.79
CHD9-201ENST00000219084 LIPGQ9Y5X9 500 aa3.88□□□□□ -1.79
CHD9-201ENST00000219084 A0A1W2PPC1 479 aa3.87□□□□□ -1.79
CHD9-201ENST00000219084 CXCL13O43927 109 aa3.87□□□□□ -1.79
CHD9-201ENST00000219084 HPRT1P00492 218 aa3.87□□□□□ -1.79
CHD9-201ENST00000219084 CTGFP29279 349 aa3.87□□□□□ -1.79
CHD9-201ENST00000219084 ACAA2P42765 397 aaKnown RBP3.87□□□□□ -1.79
CHD9-201ENST00000219084 PSG6Q00889 435 aa3.87□□□□□ -1.79
CHD9-201ENST00000219084 HFEQ30201 348 aa3.87□□□□□ -1.79
CHD9-201ENST00000219084 ZNF774Q6NX45 483 aa3.87□□□□□ -1.79
CHD9-201ENST00000219084 C19orf48Q6RUI8 117 aa3.87□□□□□ -1.79
CHD9-201ENST00000219084 OR2Y1Q8NGV0 311 aa3.87□□□□□ -1.79
CHD9-201ENST00000219084 NRIP2Q9BQI9 281 aa3.87□□□□□ -1.79
CHD9-201ENST00000219084 P4HTMQ9NXG6 502 aa3.87□□□□□ -1.79
CHD9-201ENST00000219084 TUBD1Q9UJT1 453 aa3.87□□□□□ -1.79
CHD9-201ENST00000219084 ATP23Q9Y6H3 246 aa3.87□□□□□ -1.79
CHD9-201ENST00000219084 ATG2AQ2TAZ0 1938 aa3.87□□□□□ -1.79
CHD9-201ENST00000219084 IGHV1OR21-1A0A087WYE8 117 aa3.87□□□□□ -1.79
CHD9-201ENST00000219084 A0A1B0GW15 77 aa3.87□□□□□ -1.79
CHD9-201ENST00000219084 A0A1W2PPV9 198 aa3.87□□□□□ -1.79
CHD9-201ENST00000219084 J3QT63 122 aa3.87□□□□□ -1.79
CHD9-201ENST00000219084 ZNF207O43670 478 aaKnown RBP3.87□□□□□ -1.79
CHD9-201ENST00000219084 ONECUT2O95948 504 aa3.87□□□□□ -1.79
CHD9-201ENST00000219084 CRYBA1P05813 215 aa3.87□□□□□ -1.79
CHD9-201ENST00000219084 DANCRP0C864 163 aa3.87□□□□□ -1.79
CHD9-201ENST00000219084 ZNF32P17041 273 aa3.87□□□□□ -1.79
CHD9-201ENST00000219084 MVDP53602 400 aa3.87□□□□□ -1.79
CHD9-201ENST00000219084 CLDN18P56856 261 aa3.87□□□□□ -1.79
CHD9-201ENST00000219084 GAMTQ14353 236 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms