RNA–Protein interactions for RNA: ENST00000216877.10

PTPRA-201, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,725 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-201ENST00000216877 SMPD2O60906 423 aa12.72□□□□□ -0.37
PTPRA-201ENST00000216877 CTSEP14091 401 aa12.72□□□□□ -0.37
PTPRA-201ENST00000216877 ZNF16P17020 682 aaPredicted RBP12.72□□□□□ -0.37
PTPRA-201ENST00000216877 ADMP35318 185 aa12.72□□□□□ -0.37
PTPRA-201ENST00000216877 PRTGQ2VWP7 1150 aa12.72□□□□□ -0.37
PTPRA-201ENST00000216877 CCDC71LQ8N9Z2 235 aa12.72□□□□□ -0.37
PTPRA-201ENST00000216877 ZBP1Q9H171 429 aa12.72□□□□□ -0.37
PTPRA-201ENST00000216877 ZNF581Q9P0T4 197 aa12.72□□□□□ -0.37
PTPRA-201ENST00000216877 EML5Q05BV3 1969 aa12.71□□□□□ -0.37
PTPRA-201ENST00000216877 IGLV1-36A0A0B4J1U3 117 aa12.71□□□□□ -0.37
PTPRA-201ENST00000216877 SPINT1O43278 529 aa12.71□□□□□ -0.37
PTPRA-201ENST00000216877 CFPP27918 469 aa12.71□□□□□ -0.37
PTPRA-201ENST00000216877 CDAP32320 146 aa12.71□□□□□ -0.37
PTPRA-201ENST00000216877 SOX8P57073 446 aa12.71□□□□□ -0.37
PTPRA-201ENST00000216877 MRGPRGQ86SM5 289 aa12.71□□□□□ -0.37
PTPRA-201ENST00000216877 MRGPRDQ8TDS7 321 aa12.71□□□□□ -0.37
PTPRA-201ENST00000216877 OR6C1Q96RD1 312 aa12.71□□□□□ -0.37
PTPRA-201ENST00000216877 GABRG3Q99928 467 aa12.71□□□□□ -0.37
PTPRA-201ENST00000216877 LOC105371242A0A075B767 164 aa12.71□□□□□ -0.37
PTPRA-201ENST00000216877 GLB1P16278 677 aa12.71□□□□□ -0.37
PTPRA-201ENST00000216877 DTYMKP23919 212 aa12.71□□□□□ -0.37
PTPRA-201ENST00000216877 MEF2BQ02080 365 aaPredicted RBP12.71□□□□□ -0.37
PTPRA-201ENST00000216877 ZNF90Q03938 601 aa12.71□□□□□ -0.37
PTPRA-201ENST00000216877 KIAA1644Q3SXP7 199 aa12.71□□□□□ -0.37
PTPRA-201ENST00000216877 LIME1Q9H400 295 aa12.71□□□□□ -0.37
PTPRA-201ENST00000216877 NCOR1P1Q9H4R4 102 aa12.71□□□□□ -0.37
PTPRA-201ENST00000216877 TCFL5Q9UL49 500 aa12.71□□□□□ -0.37
PTPRA-201ENST00000216877 H3BML4 177 aa12.71□□□□□ -0.38
PTPRA-201ENST00000216877 CT45A8P0DMV1 189 aa12.71□□□□□ -0.38
PTPRA-201ENST00000216877 CT45A9P0DMV2 189 aa12.71□□□□□ -0.38
PTPRA-201ENST00000216877 THBS3P49746 956 aa12.71□□□□□ -0.38
PTPRA-201ENST00000216877 DLX2Q07687 328 aaPredicted RBP12.71□□□□□ -0.38
PTPRA-201ENST00000216877 CT45A2Q5DJT8 189 aa12.71□□□□□ -0.38
PTPRA-201ENST00000216877 TPTE2P1Q5T6R2 138 aa12.71□□□□□ -0.38
PTPRA-201ENST00000216877 HOXB13Q92826 284 aaPredicted RBP12.71□□□□□ -0.38
PTPRA-201ENST00000216877 ST6GALNAC6Q969X2 333 aa12.71□□□□□ -0.38
PTPRA-201ENST00000216877 ZNF524Q96C55 264 aa12.71□□□□□ -0.38
PTPRA-201ENST00000216877 SLC46A1Q96NT5 459 aa12.71□□□□□ -0.38
PTPRA-201ENST00000216877 MEGF9Q9H1U4 602 aa12.71□□□□□ -0.38
PTPRA-201ENST00000216877 CST9LQ9H4G1 147 aa12.71□□□□□ -0.38
PTPRA-201ENST00000216877 ZNF442Q9H7R0 627 aa12.71□□□□□ -0.38
PTPRA-201ENST00000216877 ODAMA1E959 279 aa12.7□□□□□ -0.38
PTPRA-201ENST00000216877 FAHP16930 419 aa12.7□□□□□ -0.38
PTPRA-201ENST00000216877 OR1D4P47884 311 aa12.7□□□□□ -0.38
PTPRA-201ENST00000216877 ZNF121P58317 390 aaPredicted RBP12.7□□□□□ -0.38
PTPRA-201ENST00000216877 OCIAD2Q56VL3 154 aa12.7□□□□□ -0.38
PTPRA-201ENST00000216877 FAM58AQ8N1B3 248 aa12.7□□□□□ -0.38
PTPRA-201ENST00000216877 C11orf40Q8WZ69 217 aa12.7□□□□□ -0.38
PTPRA-201ENST00000216877 RASL10BQ96S79 203 aa12.7□□□□□ -0.38
PTPRA-201ENST00000216877 TXNIPQ9H3M7 391 aa12.7□□□□□ -0.38
PTPRA-201ENST00000216877 GSX1Q9H4S2 264 aaPredicted RBP12.7□□□□□ -0.38
PTPRA-201ENST00000216877 COX11Q9Y6N1 276 aa12.7□□□□□ -0.38
PTPRA-201ENST00000216877 EP300Q09472 2414 aaPredicted RBP12.7□□□□□ -0.38
PTPRA-201ENST00000216877 SPRY1O43609 319 aaPredicted RBP12.7□□□□□ -0.38
PTPRA-201ENST00000216877 SFTPA1Q8IWL2 248 aa12.7□□□□□ -0.38
PTPRA-201ENST00000216877 OR4B1Q8NGF8 309 aa12.7□□□□□ -0.38
PTPRA-201ENST00000216877 OR10A5Q9H207 317 aa12.7□□□□□ -0.38
PTPRA-201ENST00000216877 HIPK2Q9H2X6 1198 aa12.7□□□□□ -0.38
PTPRA-201ENST00000216877 FAM60AQ9NP50 221 aa12.7□□□□□ -0.38
PTPRA-201ENST00000216877 TRAV36DV7A0A075B6V5 113 aa12.7□□□□□ -0.38
PTPRA-201ENST00000216877 IGKV1D-43A0A0B4J1Z2 117 aa12.7□□□□□ -0.38
PTPRA-201ENST00000216877 OR6C6A6NF89 314 aa12.7□□□□□ -0.38
PTPRA-201ENST00000216877 CEACAM18A8MTB9 384 aa12.7□□□□□ -0.38
PTPRA-201ENST00000216877 AADACP22760 399 aa12.7□□□□□ -0.38
PTPRA-201ENST00000216877 TNFSF4P23510 183 aa12.7□□□□□ -0.38
PTPRA-201ENST00000216877 ZNF141Q15928 474 aa12.7□□□□□ -0.38
PTPRA-201ENST00000216877 CYP2G1PQ6ZSU1 146 aa12.7□□□□□ -0.38
PTPRA-201ENST00000216877 ZFYVE21Q9BQ24 234 aa12.7□□□□□ -0.38
PTPRA-201ENST00000216877 PLSCR2Q9NRY7 297 aa12.7□□□□□ -0.38
PTPRA-201ENST00000216877 SLC35D1Q9NTN3 355 aa12.7□□□□□ -0.38
PTPRA-201ENST00000216877 C3orf85A0A1B0GTC6 90 aa12.69□□□□□ -0.38
PTPRA-201ENST00000216877 SERPINE3A8MV23 424 aa12.69□□□□□ -0.38
PTPRA-201ENST00000216877 FCN1O00602 326 aa12.69□□□□□ -0.38
PTPRA-201ENST00000216877 PAGE4O60829 102 aa12.69□□□□□ -0.38
PTPRA-201ENST00000216877 KBTBD11O94819 623 aa12.69□□□□□ -0.38
PTPRA-201ENST00000216877 SLC35E2P0CK97 266 aa12.69□□□□□ -0.38
PTPRA-201ENST00000216877 IL11P20809 199 aa12.69□□□□□ -0.38
PTPRA-201ENST00000216877 P2RY2P41231 377 aa12.69□□□□□ -0.38
PTPRA-201ENST00000216877 CSTL1Q9H114 145 aa12.69□□□□□ -0.38
PTPRA-201ENST00000216877 K7ERU9 68 aa12.69□□□□□ -0.38
PTPRA-201ENST00000216877 UTS2O95399 124 aa12.69□□□□□ -0.38
PTPRA-201ENST00000216877 CTSBP07858 339 aa12.69□□□□□ -0.38
PTPRA-201ENST00000216877 ECI1P42126 302 aa12.69□□□□□ -0.38
PTPRA-201ENST00000216877 ARL4DP49703 201 aa12.69□□□□□ -0.38
PTPRA-201ENST00000216877 SHBQ15464 509 aa12.69□□□□□ -0.38
PTPRA-201ENST00000216877 SPANXN5Q5MJ07 72 aa12.69□□□□□ -0.38
PTPRA-201ENST00000216877 OR5AS1Q8N127 324 aa12.69□□□□□ -0.38
PTPRA-201ENST00000216877 OR51H1Q8NH63 302 aa12.69□□□□□ -0.38
PTPRA-201ENST00000216877 OR2A5Q96R48 311 aa12.69□□□□□ -0.38
PTPRA-201ENST00000216877 TMEM204Q9BSN7 226 aa12.69□□□□□ -0.38
PTPRA-201ENST00000216877 TIMM8BQ9Y5J9 83 aaPredicted RBP12.69□□□□□ -0.38
PTPRA-201ENST00000216877 C1QTNF9BB2RNN3 333 aa12.69□□□□□ -0.38
PTPRA-201ENST00000216877 HSPB6O14558 160 aa12.69□□□□□ -0.38
PTPRA-201ENST00000216877 HOXB2P14652 356 aa12.69□□□□□ -0.38
PTPRA-201ENST00000216877 TCN2P20062 427 aa12.69□□□□□ -0.38
PTPRA-201ENST00000216877 PGCP20142 388 aa12.69□□□□□ -0.38
PTPRA-201ENST00000216877 KITLGP21583 273 aa12.69□□□□□ -0.38
PTPRA-201ENST00000216877 MDH2P40926 338 aaKnown RBP12.69□□□□□ -0.38
PTPRA-201ENST00000216877 HSF1Q00613 529 aa12.69□□□□□ -0.38
PTPRA-201ENST00000216877 TGFBR3Q03167 851 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms