RNA–Protein interactions for RNA: ENST00000162749.6

TNFRSF1A-201, Transcript of TNF receptor superfamily member 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1A, Length 2,223 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-201ENST00000162749 IGSF11Q5DX21 431 aa16.54■□□□□ 0.24
TNFRSF1A-201ENST00000162749 C11orf87Q6NUJ2 197 aa16.54■□□□□ 0.24
TNFRSF1A-201ENST00000162749 C5orf24Q7Z6I8 188 aa16.54■□□□□ 0.24
TNFRSF1A-201ENST00000162749 PLPPR1Q8TBJ4 325 aa16.54■□□□□ 0.24
TNFRSF1A-201ENST00000162749 PPP1R1CQ8WVI7 109 aa16.54■□□□□ 0.24
TNFRSF1A-201ENST00000162749 MARVELD3Q96A59 401 aa16.54■□□□□ 0.24
TNFRSF1A-201ENST00000162749 GCM1Q9NP62 436 aa16.54■□□□□ 0.24
TNFRSF1A-201ENST00000162749 CD3EP07766 207 aa16.54■□□□□ 0.24
TNFRSF1A-201ENST00000162749 SERPINF1P36955 418 aa16.54■□□□□ 0.24
TNFRSF1A-201ENST00000162749 ATXN7L3Q14CW9 347 aaPredicted RBP16.54■□□□□ 0.24
TNFRSF1A-201ENST00000162749 LRRC37A5PQ49AS3 106 aa16.54■□□□□ 0.24
TNFRSF1A-201ENST00000162749 KCTD9Q7L273 389 aa16.54■□□□□ 0.24
TNFRSF1A-201ENST00000162749 GALNT11Q8NCW6 608 aa16.54■□□□□ 0.24
TNFRSF1A-201ENST00000162749 DECR2Q9NUI1 292 aa16.54■□□□□ 0.24
TNFRSF1A-201ENST00000162749 GLS2Q9UI32 602 aa16.54■□□□□ 0.24
TNFRSF1A-201ENST00000162749 NMBP08949 121 aa16.53■□□□□ 0.24
TNFRSF1A-201ENST00000162749 SLC25A4P12235 298 aa16.53■□□□□ 0.24
TNFRSF1A-201ENST00000162749 RCC1P18754 421 aaPredicted RBP16.53■□□□□ 0.24
TNFRSF1A-201ENST00000162749 PI3P19957 117 aa16.53■□□□□ 0.24
TNFRSF1A-201ENST00000162749 TNFSF4P23510 183 aa16.53■□□□□ 0.24
TNFRSF1A-201ENST00000162749 TLE1Q04724 770 aa16.53■□□□□ 0.24
TNFRSF1A-201ENST00000162749 AANATQ16613 207 aa16.53■□□□□ 0.24
TNFRSF1A-201ENST00000162749 C4orf17Q53FE4 359 aa16.53■□□□□ 0.24
TNFRSF1A-201ENST00000162749 ZNF880Q6PDB4 577 aa16.53■□□□□ 0.24
TNFRSF1A-201ENST00000162749 ZNF497Q6ZNH5 498 aa16.53■□□□□ 0.24
TNFRSF1A-201ENST00000162749 GAPTQ8N292 157 aa16.53■□□□□ 0.24
TNFRSF1A-201ENST00000162749 TMEM185AQ8NFB2 350 aa16.53■□□□□ 0.24
TNFRSF1A-201ENST00000162749 SCARB1Q8WTV0 552 aa16.53■□□□□ 0.24
TNFRSF1A-201ENST00000162749 RTBDNQ9BSG5 229 aaPredicted RBP16.53■□□□□ 0.24
TNFRSF1A-201ENST00000162749 RASL12Q9NYN1 266 aa16.53■□□□□ 0.24
TNFRSF1A-201ENST00000162749 DSCAML1Q8TD84 2053 aa16.53■□□□□ 0.24
TNFRSF1A-201ENST00000162749 COL12A1Q99715 3063 aa16.53■□□□□ 0.24
TNFRSF1A-201ENST00000162749 RAI1Q7Z5J4 1906 aaPredicted RBP16.53■□□□□ 0.24
TNFRSF1A-201ENST00000162749 KIR2DS1A0A191URI9 304 aa16.53■□□□□ 0.24
TNFRSF1A-201ENST00000162749 C17orf100A8MU93 164 aa16.53■□□□□ 0.24
TNFRSF1A-201ENST00000162749 LHBP01229 141 aa16.53■□□□□ 0.24
TNFRSF1A-201ENST00000162749 TFF1P04155 84 aa16.53■□□□□ 0.24
TNFRSF1A-201ENST00000162749 SCTP09683 121 aa16.53■□□□□ 0.24
TNFRSF1A-201ENST00000162749 KIR2DS4P43632 304 aa16.53■□□□□ 0.24
TNFRSF1A-201ENST00000162749 TAS2R31P59538 309 aa16.53■□□□□ 0.24
TNFRSF1A-201ENST00000162749 KIR2DS1Q14954 304 aa16.53■□□□□ 0.24
TNFRSF1A-201ENST00000162749 SURF2Q15527 256 aaPredicted RBP16.53■□□□□ 0.24
TNFRSF1A-201ENST00000162749 TMEM128Q5BJH2 165 aa16.53■□□□□ 0.24
TNFRSF1A-201ENST00000162749 SCGB3A2Q96PL1 93 aa16.53■□□□□ 0.24
TNFRSF1A-201ENST00000162749 TNFSF18Q9UNG2 199 aa16.53■□□□□ 0.24
TNFRSF1A-201ENST00000162749 FAM25EA8MYX2 175 aa16.52■□□□□ 0.24
TNFRSF1A-201ENST00000162749 ADH4P08319 380 aa16.52■□□□□ 0.24
TNFRSF1A-201ENST00000162749 FCGR2CP31995 323 aa16.52■□□□□ 0.24
TNFRSF1A-201ENST00000162749 HERPUD1Q15011 391 aa16.52■□□□□ 0.24
TNFRSF1A-201ENST00000162749 BEX5Q5H9J7 111 aa16.52■□□□□ 0.24
TNFRSF1A-201ENST00000162749 ZCCHC24Q8N2G6 241 aaKnown RBP16.52■□□□□ 0.24
TNFRSF1A-201ENST00000162749 OR5T2Q8NGG2 359 aa16.52■□□□□ 0.24
TNFRSF1A-201ENST00000162749 USP9XQ93008 2570 aaPredicted RBP16.52■□□□□ 0.23
TNFRSF1A-201ENST00000162749 VSTM5A8MXK1 200 aa16.51■□□□□ 0.23
TNFRSF1A-201ENST00000162749 TRDCB7Z8K6 153 aa16.51■□□□□ 0.23
TNFRSF1A-201ENST00000162749 I3L521 148 aa16.51■□□□□ 0.23
TNFRSF1A-201ENST00000162749 IFNL4K9M1U5 179 aa16.51■□□□□ 0.23
TNFRSF1A-201ENST00000162749 ZG16O60844 167 aa16.51■□□□□ 0.23
TNFRSF1A-201ENST00000162749 PLAUP00749 431 aa16.51■□□□□ 0.23
TNFRSF1A-201ENST00000162749 CCDC28AQ8IWP9 274 aa16.51■□□□□ 0.23
TNFRSF1A-201ENST00000162749 COQ8AQ8NI60 647 aa16.51■□□□□ 0.23
TNFRSF1A-201ENST00000162749 RNF115Q9Y4L5 304 aa16.51■□□□□ 0.23
TNFRSF1A-201ENST00000162749 POM121CA8CG34 1229 aa16.51■□□□□ 0.23
TNFRSF1A-201ENST00000162749 PSG2P11465 335 aa16.51■□□□□ 0.23
TNFRSF1A-201ENST00000162749 ECI1P42126 302 aa16.51■□□□□ 0.23
TNFRSF1A-201ENST00000162749 SUPT4H1P63272 117 aaKnown RBP16.51■□□□□ 0.23
TNFRSF1A-201ENST00000162749 CCL8P80075 99 aa16.51■□□□□ 0.23
TNFRSF1A-201ENST00000162749 SLC51BQ86UW2 128 aa16.51■□□□□ 0.23
TNFRSF1A-201ENST00000162749 FAM90A1Q86YD7 464 aa16.51■□□□□ 0.23
TNFRSF1A-201ENST00000162749 BOLLQ8N9W6 283 aaKnown RBP16.51■□□□□ 0.23
TNFRSF1A-201ENST00000162749 CXorf58Q96LI9 332 aa16.51■□□□□ 0.23
TNFRSF1A-201ENST00000162749 DIRC2Q96SL1 478 aa16.51■□□□□ 0.23
TNFRSF1A-201ENST00000162749 REG4Q9BYZ8 158 aa16.51■□□□□ 0.23
TNFRSF1A-201ENST00000162749 COMMD9Q9P000 198 aa16.51■□□□□ 0.23
TNFRSF1A-201ENST00000162749 METRNQ9UJH8 293 aa16.51■□□□□ 0.23
TNFRSF1A-201ENST00000162749 IGKV1-6A0A0C4DH72 117 aa16.5■□□□□ 0.23
TNFRSF1A-201ENST00000162749 RNF222A6NCQ9 220 aa16.5■□□□□ 0.23
TNFRSF1A-201ENST00000162749 SPDEFO95238 335 aa16.5■□□□□ 0.23
TNFRSF1A-201ENST00000162749 COL10A1Q03692 680 aa16.5■□□□□ 0.23
TNFRSF1A-201ENST00000162749 CLEC18BQ6UXF7 455 aa16.5■□□□□ 0.23
TNFRSF1A-201ENST00000162749 KCNRGQ8N5I3 272 aa16.5■□□□□ 0.23
TNFRSF1A-201ENST00000162749 CD177Q8N6Q3 437 aa16.5■□□□□ 0.23
TNFRSF1A-201ENST00000162749 RDH8Q9NYR8 311 aa16.5■□□□□ 0.23
TNFRSF1A-201ENST00000162749 WIPI2Q9Y4P8 454 aa16.5■□□□□ 0.23
TNFRSF1A-201ENST00000162749 TANC2Q9HCD6 1990 aa16.5■□□□□ 0.23
TNFRSF1A-201ENST00000162749 IGKV1D-17A0A075B6S4 117 aa16.5■□□□□ 0.23
TNFRSF1A-201ENST00000162749 A0A0D9SG52 128 aa16.5■□□□□ 0.23
TNFRSF1A-201ENST00000162749 H7C1Q1 480 aa16.5■□□□□ 0.23
TNFRSF1A-201ENST00000162749 SHOXO15266 292 aa16.5■□□□□ 0.23
TNFRSF1A-201ENST00000162749 SFT2D2O95562 160 aa16.5■□□□□ 0.23
TNFRSF1A-201ENST00000162749 CD55P08174 381 aa16.5■□□□□ 0.23
TNFRSF1A-201ENST00000162749 GLP1RP43220 463 aa16.5■□□□□ 0.23
TNFRSF1A-201ENST00000162749 SLC38A6Q8IZM9 456 aa16.5■□□□□ 0.23
TNFRSF1A-201ENST00000162749 Q8TCH9 128 aa16.5■□□□□ 0.23
TNFRSF1A-201ENST00000162749 ERGIC1Q969X5 290 aa16.5■□□□□ 0.23
TNFRSF1A-201ENST00000162749 DHRS9Q9BPW9 319 aa16.5■□□□□ 0.23
TNFRSF1A-201ENST00000162749 PRR13Q9NZ81 148 aa16.5■□□□□ 0.23
TNFRSF1A-201ENST00000162749 DNAJB11Q9UBS4 358 aa16.5■□□□□ 0.23
TNFRSF1A-201ENST00000162749 ZNF462Q96JM2 2506 aa16.5■□□□□ 0.23
TNFRSF1A-201ENST00000162749 ARID1AO14497 2285 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms