RNA–Protein interactions for RNA: ENST00000011898.9

TSPAN9-201, Transcript of tetraspanin 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN9, Length 4,323 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-201ENST00000011898 ANKRD37Q7Z713 158 aa10.64□□□□□ -0.71
TSPAN9-201ENST00000011898 C9orf40Q8IXQ3 194 aa10.64□□□□□ -0.71
TSPAN9-201ENST00000011898 ROBO4Q8WZ75 1007 aa10.64□□□□□ -0.71
TSPAN9-201ENST00000011898 FAHD2AQ96GK7 314 aa10.64□□□□□ -0.71
TSPAN9-201ENST00000011898 MARCH11A6NNE9 402 aa10.64□□□□□ -0.71
TSPAN9-201ENST00000011898 SOCS1O15524 211 aa10.64□□□□□ -0.71
TSPAN9-201ENST00000011898 TUSC2O75896 110 aa10.64□□□□□ -0.71
TSPAN9-201ENST00000011898 FHITP49789 147 aa10.64□□□□□ -0.71
TSPAN9-201ENST00000011898 FAM3BP58499 235 aaPredicted RBP10.64□□□□□ -0.71
TSPAN9-201ENST00000011898 PDCD1Q15116 288 aa10.64□□□□□ -0.71
TSPAN9-201ENST00000011898 CEACAM16Q2WEN9 425 aa10.64□□□□□ -0.71
TSPAN9-201ENST00000011898 PPP1R35Q8TAP8 253 aa10.64□□□□□ -0.71
TSPAN9-201ENST00000011898 TMEM74BQ9NUR3 256 aa10.64□□□□□ -0.71
TSPAN9-201ENST00000011898 UBE2L5PA0A1B0GUS4 154 aa10.64□□□□□ -0.71
TSPAN9-201ENST00000011898 MEX3AA1L020 520 aaKnown RBP10.64□□□□□ -0.71
TSPAN9-201ENST00000011898 NXPH2O95156 264 aa10.64□□□□□ -0.71
TSPAN9-201ENST00000011898 HOXA6P31267 233 aa10.64□□□□□ -0.71
TSPAN9-201ENST00000011898 COMPP49747 757 aaPredicted RBP10.64□□□□□ -0.71
TSPAN9-201ENST00000011898 LDLRAD2Q5SZI1 272 aa10.64□□□□□ -0.71
TSPAN9-201ENST00000011898 RHBDD2Q6NTF9 364 aa10.64□□□□□ -0.71
TSPAN9-201ENST00000011898 OR4B1Q8NGF8 309 aa10.64□□□□□ -0.71
TSPAN9-201ENST00000011898 ASB10Q8WXI3 467 aa10.64□□□□□ -0.71
TSPAN9-201ENST00000011898 OR2J1Q9GZK6 312 aa10.64□□□□□ -0.71
TSPAN9-201ENST00000011898 FSCN3Q9NQT6 498 aa10.64□□□□□ -0.71
TSPAN9-201ENST00000011898 PSENENQ9NZ42 101 aa10.64□□□□□ -0.71
TSPAN9-201ENST00000011898 VSIG4Q9Y279 399 aa10.64□□□□□ -0.71
TSPAN9-201ENST00000011898 MRPS18BQ9Y676 258 aaKnown RBP10.64□□□□□ -0.71
TSPAN9-201ENST00000011898 COLCA2A8K830 154 aa10.63□□□□□ -0.71
TSPAN9-201ENST00000011898 VSTM5A8MXK1 200 aa10.63□□□□□ -0.71
TSPAN9-201ENST00000011898 GYPAP02724 150 aa10.63□□□□□ -0.71
TSPAN9-201ENST00000011898 THBS3P49746 956 aa10.63□□□□□ -0.71
TSPAN9-201ENST00000011898 FAM3AP98173 230 aa10.63□□□□□ -0.71
TSPAN9-201ENST00000011898 LHFPL2Q6ZUX7 228 aa10.63□□□□□ -0.71
TSPAN9-201ENST00000011898 TMEM183AQ8IXX5 376 aa10.63□□□□□ -0.71
TSPAN9-201ENST00000011898 C20orf196Q8IYI0 205 aa10.63□□□□□ -0.71
TSPAN9-201ENST00000011898 PINX1Q96BK5 328 aaKnown RBP10.63□□□□□ -0.71
TSPAN9-201ENST00000011898 GPX7Q96SL4 187 aaPredicted RBP10.63□□□□□ -0.71
TSPAN9-201ENST00000011898 DUSP15Q9H1R2 295 aaPredicted RBP10.63□□□□□ -0.71
TSPAN9-201ENST00000011898 IGHV3-64DA0A0J9YX35 117 aa10.63□□□□□ -0.71
TSPAN9-201ENST00000011898 CHEK1O14757 476 aa10.63□□□□□ -0.71
TSPAN9-201ENST00000011898 CDC14BO60729 498 aa10.63□□□□□ -0.71
TSPAN9-201ENST00000011898 RPS16P62249 146 aaKnown RBP10.63□□□□□ -0.71
TSPAN9-201ENST00000011898 MGAT2Q10469 447 aa10.63□□□□□ -0.71
TSPAN9-201ENST00000011898 LTC4SQ16873 150 aa10.63□□□□□ -0.71
TSPAN9-201ENST00000011898 C16orf82Q7Z2V1 217 aa10.63□□□□□ -0.71
TSPAN9-201ENST00000011898 NR2C2APQ86WQ0 139 aa10.63□□□□□ -0.71
TSPAN9-201ENST00000011898 ABCA7Q8IZY2 2146 aa10.63□□□□□ -0.71
TSPAN9-201ENST00000011898 OSR2Q8N2R0 312 aa10.63□□□□□ -0.71
TSPAN9-201ENST00000011898 OR8B12Q8NGG6 310 aa10.63□□□□□ -0.71
TSPAN9-201ENST00000011898 RARRES2Q99969 163 aa10.63□□□□□ -0.71
TSPAN9-201ENST00000011898 C2orf88Q9BSF0 95 aa10.63□□□□□ -0.71
TSPAN9-201ENST00000011898 FAAP24Q9BTP7 215 aa10.63□□□□□ -0.71
TSPAN9-201ENST00000011898 KIAA1456Q9P272 454 aa10.63□□□□□ -0.71
TSPAN9-201ENST00000011898 WIPI2Q9Y4P8 454 aa10.63□□□□□ -0.71
TSPAN9-201ENST00000011898 DHRS3O75911 302 aa10.63□□□□□ -0.71
TSPAN9-201ENST00000011898 HRASP01112 189 aa10.63□□□□□ -0.71
TSPAN9-201ENST00000011898 KRASP01116 189 aa10.63□□□□□ -0.71
TSPAN9-201ENST00000011898 VSIG8P0DPA2 414 aa10.63□□□□□ -0.71
TSPAN9-201ENST00000011898 CD46P15529 392 aa10.63□□□□□ -0.71
TSPAN9-201ENST00000011898 ATP6V0CP27449 155 aa10.63□□□□□ -0.71
TSPAN9-201ENST00000011898 LINC01590Q5TEZ4 76 aa10.63□□□□□ -0.71
TSPAN9-201ENST00000011898 UNQ9370/PRO34162Q6UXP9 181 aa10.63□□□□□ -0.71
TSPAN9-201ENST00000011898 OR10P1Q8NGE3 313 aa10.63□□□□□ -0.71
TSPAN9-201ENST00000011898 OR10J5Q8NHC4 309 aa10.63□□□□□ -0.71
TSPAN9-201ENST00000011898 GAL3ST2Q9H3Q3 398 aa10.63□□□□□ -0.71
TSPAN9-201ENST00000011898 C12orf49Q9H741 205 aa10.63□□□□□ -0.71
TSPAN9-201ENST00000011898 LIPT2A6NK58 231 aa10.62□□□□□ -0.71
TSPAN9-201ENST00000011898 LDLRAD4O15165 306 aa10.62□□□□□ -0.71
TSPAN9-201ENST00000011898 EFSO43281 561 aa10.62□□□□□ -0.71
TSPAN9-201ENST00000011898 WDR1O75083 606 aa10.62□□□□□ -0.71
TSPAN9-201ENST00000011898 PRSS12P56730 875 aa10.62□□□□□ -0.71
TSPAN9-201ENST00000011898 SPSB1Q96BD6 273 aa10.62□□□□□ -0.71
TSPAN9-201ENST00000011898 C5orf49A4QMS7 147 aa10.62□□□□□ -0.71
TSPAN9-201ENST00000011898 K7ESF4 209 aa10.62□□□□□ -0.71
TSPAN9-201ENST00000011898 M0R2Z0 102 aa10.62□□□□□ -0.71
TSPAN9-201ENST00000011898 GFRA3O60609 400 aa10.62□□□□□ -0.71
TSPAN9-201ENST00000011898 DSCR4P56555 118 aaPredicted RBP10.62□□□□□ -0.71
TSPAN9-201ENST00000011898 CLDN15P56746 228 aa10.62□□□□□ -0.71
TSPAN9-201ENST00000011898 TMEM267Q0VDI3 215 aaPredicted RBP10.62□□□□□ -0.71
TSPAN9-201ENST00000011898 TSPO2Q5TGU0 170 aa10.62□□□□□ -0.71
TSPAN9-201ENST00000011898 GFI1BQ5VTD9 330 aa10.62□□□□□ -0.71
TSPAN9-201ENST00000011898 RNF133Q8WVZ7 376 aa10.62□□□□□ -0.71
TSPAN9-201ENST00000011898 MRPL24Q96A35 216 aaKnown RBP10.62□□□□□ -0.71
TSPAN9-201ENST00000011898 TRBV5-5A0A0J9YX44 114 aa10.62□□□□□ -0.71
TSPAN9-201ENST00000011898 H3BMH7 237 aa10.62□□□□□ -0.71
TSPAN9-201ENST00000011898 CD74P04233 296 aa10.62□□□□□ -0.71
TSPAN9-201ENST00000011898 CCL11P51671 97 aa10.62□□□□□ -0.71
TSPAN9-201ENST00000011898 PRRX1P54821 245 aa10.62□□□□□ -0.71
TSPAN9-201ENST00000011898 TCL1AP56279 114 aa10.62□□□□□ -0.71
TSPAN9-201ENST00000011898 NHLH1Q02575 133 aa10.62□□□□□ -0.71
TSPAN9-201ENST00000011898 CATR1Q13166 79 aa10.62□□□□□ -0.71
TSPAN9-201ENST00000011898 PET117Q6UWS5 81 aa10.62□□□□□ -0.71
TSPAN9-201ENST00000011898 TMEM208Q9BTX3 173 aa10.62□□□□□ -0.71
TSPAN9-201ENST00000011898 COL4A2P08572 1712 aa10.62□□□□□ -0.71
TSPAN9-201ENST00000011898 CLEC3BP05452 202 aa10.62□□□□□ -0.71
TSPAN9-201ENST00000011898 CTXN2P0C2S0 81 aa10.62□□□□□ -0.71
TSPAN9-201ENST00000011898 PPOXP50336 477 aa10.62□□□□□ -0.71
TSPAN9-201ENST00000011898 EFNB1P98172 346 aa10.62□□□□□ -0.71
TSPAN9-201ENST00000011898 ATOH7Q8N100 152 aa10.62□□□□□ -0.71
TSPAN9-201ENST00000011898 APCDD1LQ8NCL9 501 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms