RNA–Protein interactions for RNA: ENSMUST00000111050.9

Bdnf-209, Transcript of Brain-derived neurotrophic factor, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Bdnf, Length 3,965 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-209ENSMUST00000111050 Nudt21Q9CQF3 227 aaKnown RBP6.74□□□□□ -1.33
Bdnf-209ENSMUST00000111050 Prdm5Q9CXE0 599 aa6.74□□□□□ -1.33
Bdnf-209ENSMUST00000111050 Shisa5Q9D7I0 235 aa6.74□□□□□ -1.33
Bdnf-209ENSMUST00000111050 PifoQ9D9W1 207 aa6.74□□□□□ -1.33
Bdnf-209ENSMUST00000111050 GmfgQ9ERL7 142 aa6.74□□□□□ -1.33
Bdnf-209ENSMUST00000111050 Akip1Q9JJR5 212 aa6.74□□□□□ -1.33
Bdnf-209ENSMUST00000111050 Hnf4gQ9WUU6 408 aa6.74□□□□□ -1.33
Bdnf-209ENSMUST00000111050 A0A286YDP4 300 aa6.73□□□□□ -1.33
Bdnf-209ENSMUST00000111050 Olfr1095A3KPP7 308 aa6.73□□□□□ -1.33
Bdnf-209ENSMUST00000111050 Nlgn4lB0F2B4 945 aa6.73□□□□□ -1.33
Bdnf-209ENSMUST00000111050 Aadacl4B1AVU5 407 aa6.73□□□□□ -1.33
Bdnf-209ENSMUST00000111050 Gm17333C6EQI3 125 aa6.73□□□□□ -1.33
Bdnf-209ENSMUST00000111050 Fbxw15L7N1X6 466 aa6.73□□□□□ -1.33
Bdnf-209ENSMUST00000111050 EndogO08600 294 aa6.73□□□□□ -1.33
Bdnf-209ENSMUST00000111050 Nipsnap2O55126 281 aa6.73□□□□□ -1.33
Bdnf-209ENSMUST00000111050 H3f3cP02301 136 aa6.73□□□□□ -1.33
Bdnf-209ENSMUST00000111050 Mdh2P08249 338 aaKnown RBP6.73□□□□□ -1.33
Bdnf-209ENSMUST00000111050 Fcgr3P08508 261 aa6.73□□□□□ -1.33
Bdnf-209ENSMUST00000111050 Pnliprp2P17892 482 aa6.73□□□□□ -1.33
Bdnf-209ENSMUST00000111050 Vamp3P63024 103 aa6.73□□□□□ -1.33
Bdnf-209ENSMUST00000111050 Vamp2P63044 116 aa6.73□□□□□ -1.33
Bdnf-209ENSMUST00000111050 H3f3aP84244 136 aaKnown RBP6.73□□□□□ -1.33
Bdnf-209ENSMUST00000111050 Cobll1Q3UMF0 1273 aa6.73□□□□□ -1.33
Bdnf-209ENSMUST00000111050 Csnk2a1Q60737 391 aaKnown RBP6.73□□□□□ -1.33
Bdnf-209ENSMUST00000111050 Rcor3Q6PGA0 451 aa6.73□□□□□ -1.33
Bdnf-209ENSMUST00000111050 Shc4Q6S5L9 626 aa6.73□□□□□ -1.33
Bdnf-209ENSMUST00000111050 Olfr506Q7TRU6 314 aa6.73□□□□□ -1.33
Bdnf-209ENSMUST00000111050 Stk17bQ8BG48 372 aa6.73□□□□□ -1.33
Bdnf-209ENSMUST00000111050 Tm2d3Q8BJ83 261 aa6.73□□□□□ -1.33
Bdnf-209ENSMUST00000111050 IqcjQ8BPW0 110 aa6.73□□□□□ -1.33
Bdnf-209ENSMUST00000111050 Saxo2Q8BQB6 394 aa6.73□□□□□ -1.33
Bdnf-209ENSMUST00000111050 C8gQ8VCG4 202 aa6.73□□□□□ -1.33
Bdnf-209ENSMUST00000111050 Olfr1451Q8VFX5 310 aa6.73□□□□□ -1.33
Bdnf-209ENSMUST00000111050 Olfr1408Q8VG32 310 aa6.73□□□□□ -1.33
Bdnf-209ENSMUST00000111050 DohhQ99LN9 302 aa6.73□□□□□ -1.33
Bdnf-209ENSMUST00000111050 MokQ9WVS4 420 aa6.73□□□□□ -1.33
Bdnf-209ENSMUST00000111050 Parp4E9PYK3 1969 aa6.73□□□□□ -1.33
Bdnf-209ENSMUST00000111050 Notch4P31695 1964 aa6.73□□□□□ -1.33
Bdnf-209ENSMUST00000111050 Gm45783A0A1B0GT48 74 aa6.73□□□□□ -1.33
Bdnf-209ENSMUST00000111050 Olfr1245A0A1L1SQJ6 307 aa6.73□□□□□ -1.33
Bdnf-209ENSMUST00000111050 Vmn1r232A2RTT5 351 aa6.73□□□□□ -1.33
Bdnf-209ENSMUST00000111050 Gm4950D3YUM8 205 aa6.73□□□□□ -1.33
Bdnf-209ENSMUST00000111050 Gm498D3YYH9 372 aa6.73□□□□□ -1.33
Bdnf-209ENSMUST00000111050 Gm7275E9Q1B3 247 aa6.73□□□□□ -1.33
Bdnf-209ENSMUST00000111050 Vmn1r194J3JS27 296 aa6.73□□□□□ -1.33
Bdnf-209ENSMUST00000111050 Hist1h1aP43275 213 aa6.73□□□□□ -1.33
Bdnf-209ENSMUST00000111050 Efnb2P52800 336 aa6.73□□□□□ -1.33
Bdnf-209ENSMUST00000111050 Rps4xP62702 263 aaKnown RBP6.73□□□□□ -1.33
Bdnf-209ENSMUST00000111050 Fgf17P63075 216 aa6.73□□□□□ -1.33
Bdnf-209ENSMUST00000111050 Lrrc30Q3UV48 300 aa6.73□□□□□ -1.33
Bdnf-209ENSMUST00000111050 N4bp2l1Q3V2Q8 238 aa6.73□□□□□ -1.33
Bdnf-209ENSMUST00000111050 Olfr524Q7TRU0 318 aa6.73□□□□□ -1.33
Bdnf-209ENSMUST00000111050 Tmem106bQ80X71 275 aa6.73□□□□□ -1.33
Bdnf-209ENSMUST00000111050 Ap5m1Q8BJ63 490 aa6.73□□□□□ -1.33
Bdnf-209ENSMUST00000111050 F830045P16RikQ8BJ95 487 aa6.73□□□□□ -1.33
Bdnf-209ENSMUST00000111050 LiphQ8CIV3 451 aa6.73□□□□□ -1.33
Bdnf-209ENSMUST00000111050 Olfr24Q8VFM9 313 aa6.73□□□□□ -1.33
Bdnf-209ENSMUST00000111050 Pot1Q91WC1 640 aaKnown RBP6.73□□□□□ -1.33
Bdnf-209ENSMUST00000111050 Steap4Q923B6 470 aa6.73□□□□□ -1.33
Bdnf-209ENSMUST00000111050 Ms4a4dQ99N05 225 aa6.73□□□□□ -1.33
Bdnf-209ENSMUST00000111050 Washc3Q9CR27 194 aa6.73□□□□□ -1.33
Bdnf-209ENSMUST00000111050 Fam241aQ9CZL2 131 aa6.73□□□□□ -1.33
Bdnf-209ENSMUST00000111050 Mrps33Q9D2R8 106 aa6.73□□□□□ -1.33
Bdnf-209ENSMUST00000111050 Igkv10-94A0A075B5L1 115 aa6.73□□□□□ -1.33
Bdnf-209ENSMUST00000111050 Rpl23a-ps3A0A140T8M7 156 aa6.73□□□□□ -1.33
Bdnf-209ENSMUST00000111050 Gm8888J3QPX5 126 aa6.73□□□□□ -1.33
Bdnf-209ENSMUST00000111050 Slc25a4P48962 298 aaKnown RBP6.73□□□□□ -1.33
Bdnf-209ENSMUST00000111050 Rpl23aP62751 156 aaKnown RBP6.73□□□□□ -1.33
Bdnf-209ENSMUST00000111050 UqcrhP99028 89 aa6.73□□□□□ -1.33
Bdnf-209ENSMUST00000111050 Trav8d-1Q5R1H8 112 aa6.73□□□□□ -1.33
Bdnf-209ENSMUST00000111050 Rpa2Q62193 270 aa6.73□□□□□ -1.33
Bdnf-209ENSMUST00000111050 Thap4Q6P3Z3 569 aa6.73□□□□□ -1.33
Bdnf-209ENSMUST00000111050 Kiss1Q6Y4S4 130 aa6.73□□□□□ -1.33
Bdnf-209ENSMUST00000111050 Olfr1341Q7TQV4 312 aa6.73□□□□□ -1.33
Bdnf-209ENSMUST00000111050 Vwa1Q8R2Z5 415 aa6.73□□□□□ -1.33
Bdnf-209ENSMUST00000111050 Mfsd4b1Q8VCV9 425 aa6.73□□□□□ -1.33
Bdnf-209ENSMUST00000111050 Olfr998Q8VF76 314 aa6.73□□□□□ -1.33
Bdnf-209ENSMUST00000111050 Q99K99 313 aa6.73□□□□□ -1.33
Bdnf-209ENSMUST00000111050 Tmem50aQ9CXL1 157 aa6.73□□□□□ -1.33
Bdnf-209ENSMUST00000111050 Slc25a18Q9DB41 320 aa6.73□□□□□ -1.33
Bdnf-209ENSMUST00000111050 Tmem183Q9JJB9 375 aa6.73□□□□□ -1.33
Bdnf-209ENSMUST00000111050 Mecp2Q9Z2D6 484 aaKnown RBP6.73□□□□□ -1.33
Bdnf-209ENSMUST00000111050 Col5a3Q9JLI2 1739 aa6.72□□□□□ -1.33
Bdnf-209ENSMUST00000111050 Scgb1b12A0A087WP21 93 aa6.72□□□□□ -1.33
Bdnf-209ENSMUST00000111050 Tcrg-V3A0A0G2JEW2 117 aa6.72□□□□□ -1.33
Bdnf-209ENSMUST00000111050 Gm6904E9PVF1 202 aa6.72□□□□□ -1.33
Bdnf-209ENSMUST00000111050 Psg20E9Q9B4 475 aa6.72□□□□□ -1.33
Bdnf-209ENSMUST00000111050 Irs3O54718 495 aa6.72□□□□□ -1.33
Bdnf-209ENSMUST00000111050 P01881 257 aa6.72□□□□□ -1.33
Bdnf-209ENSMUST00000111050 Rab3dP35276 219 aa6.72□□□□□ -1.33
Bdnf-209ENSMUST00000111050 Nanos2P60322 136 aa6.72□□□□□ -1.33
Bdnf-209ENSMUST00000111050 Ear2P97425 156 aa6.72□□□□□ -1.33
Bdnf-209ENSMUST00000111050 VegfcP97953 415 aa6.72□□□□□ -1.33
Bdnf-209ENSMUST00000111050 Cib3Q0P523 160 aa6.72□□□□□ -1.33
Bdnf-209ENSMUST00000111050 Znf48Q3US17 591 aa6.72□□□□□ -1.33
Bdnf-209ENSMUST00000111050 BC100530Q497J0 97 aa6.72□□□□□ -1.33
Bdnf-209ENSMUST00000111050 Rasl2-9Q61820 216 aa6.72□□□□□ -1.33
Bdnf-209ENSMUST00000111050 CishQ62225 257 aa6.72□□□□□ -1.33
Bdnf-209ENSMUST00000111050 Ovch2Q7M761 609 aa6.72□□□□□ -1.33
Bdnf-209ENSMUST00000111050 Abhd16bQ80YU0 474 aa6.72□□□□□ -1.33
Retrieved 100 of 22,080 RNA–protein pairs in 44.4 ms