RNA–Protein interactions for RNA: ENSMUST00000106035.7

Ccdc28b-202, Transcript of Coiled-coil domain-containing protein 28B, mousemouse

TSL 1 (best) BASIC

Gene Ccdc28b, Length 821 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28b-202ENSMUST00000106035 RogdiQ3TDK6 287 aa10.08□□□□□ -0.8
Ccdc28b-202ENSMUST00000106035 Rnft2Q3UF64 445 aa10.08□□□□□ -0.8
Ccdc28b-202ENSMUST00000106035 B3gnt3Q5JCS9 372 aa10.08□□□□□ -0.8
Ccdc28b-202ENSMUST00000106035 Xaf1Q5NBU8 273 aa10.08□□□□□ -0.8
Ccdc28b-202ENSMUST00000106035 Znf354aQ61751 572 aa10.08□□□□□ -0.8
Ccdc28b-202ENSMUST00000106035 Glra1Q64018 457 aa10.08□□□□□ -0.8
Ccdc28b-202ENSMUST00000106035 Tusc1Q673H1 205 aa10.08□□□□□ -0.8
Ccdc28b-202ENSMUST00000106035 Taf9bQ6NZA9 249 aa10.08□□□□□ -0.8
Ccdc28b-202ENSMUST00000106035 Olfr180Q7TS48 317 aa10.08□□□□□ -0.8
Ccdc28b-202ENSMUST00000106035 BspryQ80YW5 473 aa10.08□□□□□ -0.8
Ccdc28b-202ENSMUST00000106035 Arl6ip6Q8BH07 226 aa10.08□□□□□ -0.8
Ccdc28b-202ENSMUST00000106035 Stac2Q8R1B0 408 aa10.08□□□□□ -0.8
Ccdc28b-202ENSMUST00000106035 PurgQ8R4E6 350 aaKnown RBP10.08□□□□□ -0.8
Ccdc28b-202ENSMUST00000106035 Poldip2Q91VA6 368 aa10.08□□□□□ -0.8
Ccdc28b-202ENSMUST00000106035 Eps8l3Q91WL0 600 aa10.08□□□□□ -0.8
Ccdc28b-202ENSMUST00000106035 Nmd3Q99L48 503 aaKnown RBP10.08□□□□□ -0.8
Ccdc28b-202ENSMUST00000106035 Txndc17Q9CQM5 123 aa10.08□□□□□ -0.8
Ccdc28b-202ENSMUST00000106035 Serpinb11Q9CQV3 388 aa10.08□□□□□ -0.8
Ccdc28b-202ENSMUST00000106035 BambiQ9D0L6 260 aa10.08□□□□□ -0.8
Ccdc28b-202ENSMUST00000106035 Spink12Q9D256 87 aa10.08□□□□□ -0.8
Ccdc28b-202ENSMUST00000106035 Ly96Q9JHF9 160 aa10.08□□□□□ -0.8
Ccdc28b-202ENSMUST00000106035 Olfr1264Q9R0K2 308 aa10.08□□□□□ -0.8
Ccdc28b-202ENSMUST00000106035 Cib1Q9Z0F4 191 aa10.08□□□□□ -0.8
Ccdc28b-202ENSMUST00000106035 Ighv9-2A0A0B4J1J4 117 aa10.07□□□□□ -0.8
Ccdc28b-202ENSMUST00000106035 Skint4A7TZF3 474 aa10.07□□□□□ -0.8
Ccdc28b-202ENSMUST00000106035 Olfr171G5E8J1 314 aa10.07□□□□□ -0.8
Ccdc28b-202ENSMUST00000106035 MfngO09008 321 aa10.07□□□□□ -0.8
Ccdc28b-202ENSMUST00000106035 PhyhO35386 338 aa10.07□□□□□ -0.8
Ccdc28b-202ENSMUST00000106035 Cd74P04441 279 aa10.07□□□□□ -0.8
Ccdc28b-202ENSMUST00000106035 GusbP12265 648 aa10.07□□□□□ -0.8
Ccdc28b-202ENSMUST00000106035 Ranbp1P34022 203 aaKnown RBP10.07□□□□□ -0.8
Ccdc28b-202ENSMUST00000106035 Stfa1P35175 97 aa10.07□□□□□ -0.8
Ccdc28b-202ENSMUST00000106035 Timp3P39876 211 aa10.07□□□□□ -0.8
Ccdc28b-202ENSMUST00000106035 Ccl9P51670 122 aa10.07□□□□□ -0.8
Ccdc28b-202ENSMUST00000106035 Arf6P62331 175 aa10.07□□□□□ -0.8
Ccdc28b-202ENSMUST00000106035 Tmem231Q3U284 315 aa10.07□□□□□ -0.8
Ccdc28b-202ENSMUST00000106035 Rnf166Q3U9F6 237 aa10.07□□□□□ -0.8
Ccdc28b-202ENSMUST00000106035 Gal3st2cQ3ULK5 396 aa10.07□□□□□ -0.8
Ccdc28b-202ENSMUST00000106035 Gm10696Q3UTC4 357 aa10.07□□□□□ -0.8
Ccdc28b-202ENSMUST00000106035 Lrrc30Q3UV48 300 aa10.07□□□□□ -0.8
Ccdc28b-202ENSMUST00000106035 BC030870Q3V2G4 71 aa10.07□□□□□ -0.8
Ccdc28b-202ENSMUST00000106035 Olfr331Q5NC44 324 aa10.07□□□□□ -0.8
Ccdc28b-202ENSMUST00000106035 Klra2Q60660 288 aa10.07□□□□□ -0.8
Ccdc28b-202ENSMUST00000106035 Ccsmst1Q6RUT7 136 aa10.07□□□□□ -0.8
Ccdc28b-202ENSMUST00000106035 Olfr1211Q7TR09 311 aa10.07□□□□□ -0.8
Ccdc28b-202ENSMUST00000106035 Scn3bQ8BHK2 215 aa10.07□□□□□ -0.8
Ccdc28b-202ENSMUST00000106035 Plcxd3Q8BLJ3 321 aa10.07□□□□□ -0.8
Ccdc28b-202ENSMUST00000106035 Pcgf1Q8R023 259 aaKnown RBP10.07□□□□□ -0.8
Ccdc28b-202ENSMUST00000106035 Olfr836Q8VFJ3 317 aa10.07□□□□□ -0.8
Ccdc28b-202ENSMUST00000106035 Olfr1487Q8VFQ6 315 aa10.07□□□□□ -0.8
Ccdc28b-202ENSMUST00000106035 Olfr1342Q8VFY3 315 aa10.07□□□□□ -0.8
Ccdc28b-202ENSMUST00000106035 Q91V76 315 aa10.07□□□□□ -0.8
Ccdc28b-202ENSMUST00000106035 Teddm3Q9CQH1 294 aa10.07□□□□□ -0.8
Ccdc28b-202ENSMUST00000106035 Polr3kQ9CQZ7 108 aa10.07□□□□□ -0.8
Ccdc28b-202ENSMUST00000106035 Sgo1Q9CXH7 517 aa10.07□□□□□ -0.8
Ccdc28b-202ENSMUST00000106035 Rpl15Q9CZM2 204 aaKnown RBP10.07□□□□□ -0.8
Ccdc28b-202ENSMUST00000106035 Ninj2Q9JL89 143 aa10.07□□□□□ -0.8
Ccdc28b-202ENSMUST00000106035 Acox1Q9R0H0 661 aaKnown RBP10.07□□□□□ -0.8
Ccdc28b-202ENSMUST00000106035 Olfr1192-ps1A0A1L1SRD7 309 aa10.06□□□□□ -0.8
Ccdc28b-202ENSMUST00000106035 Gm5072A2AHM1 344 aa10.06□□□□□ -0.8
Ccdc28b-202ENSMUST00000106035 KprpB2RUR4 657 aa10.06□□□□□ -0.8
Ccdc28b-202ENSMUST00000106035 Shisa8J3QNX5 399 aa10.06□□□□□ -0.8
Ccdc28b-202ENSMUST00000106035 Gm26661M0QWV4 156 aa10.06□□□□□ -0.8
Ccdc28b-202ENSMUST00000106035 Rasd1O35626 280 aa10.06□□□□□ -0.8
Ccdc28b-202ENSMUST00000106035 Mpzl2O70255 215 aa10.06□□□□□ -0.8
Ccdc28b-202ENSMUST00000106035 UbcP0CG50 734 aaKnown RBP10.06□□□□□ -0.8
Ccdc28b-202ENSMUST00000106035 Rpl7P14148 270 aaKnown RBP10.06□□□□□ -0.8
Ccdc28b-202ENSMUST00000106035 RpsaP14206 295 aaKnown RBP10.06□□□□□ -0.8
Ccdc28b-202ENSMUST00000106035 Gnao1P18872 354 aa10.06□□□□□ -0.8
Ccdc28b-202ENSMUST00000106035 GastP48757 101 aa10.06□□□□□ -0.8
Ccdc28b-202ENSMUST00000106035 Hes5P70120 167 aa10.06□□□□□ -0.8
Ccdc28b-202ENSMUST00000106035 Tbx5P70326 518 aa10.06□□□□□ -0.8
Ccdc28b-202ENSMUST00000106035 ShbgP97497 403 aa10.06□□□□□ -0.8
Ccdc28b-202ENSMUST00000106035 Ceacam10Q61400 265 aa10.06□□□□□ -0.8
Ccdc28b-202ENSMUST00000106035 Olfr775Q7TRI4 312 aa10.06□□□□□ -0.8
Ccdc28b-202ENSMUST00000106035 Fbxo2Q80UW2 297 aa10.06□□□□□ -0.8
Ccdc28b-202ENSMUST00000106035 Pqlc1Q80XM9 271 aa10.06□□□□□ -0.8
Ccdc28b-202ENSMUST00000106035 Zfp189Q8BKP2 608 aa10.06□□□□□ -0.8
Ccdc28b-202ENSMUST00000106035 Defb21Q8C5Z4 100 aa10.06□□□□□ -0.8
Ccdc28b-202ENSMUST00000106035 Gm16503Q8C6M9 103 aa10.06□□□□□ -0.8
Ccdc28b-202ENSMUST00000106035 Srsf12Q8C8K3 266 aa10.06□□□□□ -0.8
Ccdc28b-202ENSMUST00000106035 Timm21Q8CCM6 249 aa10.06□□□□□ -0.8
Ccdc28b-202ENSMUST00000106035 Trmt6Q8CE96 497 aa10.06□□□□□ -0.8
Ccdc28b-202ENSMUST00000106035 Prss45Q8K4I7 317 aa10.06□□□□□ -0.8
Ccdc28b-202ENSMUST00000106035 Vmn1r19Q8R2C7 308 aa10.06□□□□□ -0.8
Ccdc28b-202ENSMUST00000106035 Commd4Q9CQ02 199 aa10.06□□□□□ -0.8
Ccdc28b-202ENSMUST00000106035 Lamp5Q9D387 280 aa10.06□□□□□ -0.8
Ccdc28b-202ENSMUST00000106035 Slc7a8Q9QXW9 531 aa10.06□□□□□ -0.8
Ccdc28b-202ENSMUST00000106035 Ighv1-34A0A075B5V2 117 aa10.05□□□□□ -0.8
Ccdc28b-202ENSMUST00000106035 Mageb4A2A9R3 556 aa10.05□□□□□ -0.8
Ccdc28b-202ENSMUST00000106035 Gm17175E9Q528 179 aa10.05□□□□□ -0.8
Ccdc28b-202ENSMUST00000106035 Olfr417F8VQB1 309 aa10.05□□□□□ -0.8
Ccdc28b-202ENSMUST00000106035 Olfr936J3KMV2 267 aa10.05□□□□□ -0.8
Ccdc28b-202ENSMUST00000106035 Tmem178bM0QWJ9 172 aa10.05□□□□□ -0.8
Ccdc28b-202ENSMUST00000106035 Bnip2O54940 326 aa10.05□□□□□ -0.8
Ccdc28b-202ENSMUST00000106035 Kcnj15O88932 375 aa10.05□□□□□ -0.8
Ccdc28b-202ENSMUST00000106035 Klk1b3P00756 261 aa10.05□□□□□ -0.8
Ccdc28b-202ENSMUST00000106035 H2-DMaP28078 261 aa10.05□□□□□ -0.8
Ccdc28b-202ENSMUST00000106035 P2rx3Q3UR32 397 aa10.05□□□□□ -0.8
Ccdc28b-202ENSMUST00000106035 Olfr1321Q7TQW4 319 aa10.05□□□□□ -0.8
Retrieved 100 of 22,080 RNA–protein pairs in 46.4 ms