RNA–Protein interactions for RNA: ENST00000641272.1

PHGDH-213, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-213ENST00000641272 ERVK13-1Q9NX77 482 aa13.23□□□□□ -0.29
PHGDH-213ENST00000641272 IGHV3-72A0A0B4J1Y9 119 aa13.22□□□□□ -0.29
PHGDH-213ENST00000641272 SNTNA6NMZ2 147 aa13.22□□□□□ -0.29
PHGDH-213ENST00000641272 SERPINE3A8MV23 424 aa13.22□□□□□ -0.29
PHGDH-213ENST00000641272 HTR3BO95264 441 aa13.22□□□□□ -0.29
PHGDH-213ENST00000641272 RAB3AP20336 220 aa13.22□□□□□ -0.29
PHGDH-213ENST00000641272 RPL23AP62750 156 aaKnown RBP13.22□□□□□ -0.29
PHGDH-213ENST00000641272 MADCAM1Q13477 382 aa13.22□□□□□ -0.29
PHGDH-213ENST00000641272 IL13RA2Q14627 380 aa13.22□□□□□ -0.29
PHGDH-213ENST00000641272 RSU1Q15404 277 aa13.22□□□□□ -0.29
PHGDH-213ENST00000641272 OR2W3Q7Z3T1 314 aa13.22□□□□□ -0.29
PHGDH-213ENST00000641272 KLHL30-AS1Q8NEE0 82 aa13.22□□□□□ -0.29
PHGDH-213ENST00000641272 OR10X1Q8NGY0 326 aa13.22□□□□□ -0.29
PHGDH-213ENST00000641272 DUX3Q96PT4 197 aa13.22□□□□□ -0.29
PHGDH-213ENST00000641272 PCDHB16Q9NRJ7 776 aa13.22□□□□□ -0.29
PHGDH-213ENST00000641272 FAM90A18PA6NE21 464 aa13.21□□□□□ -0.29
PHGDH-213ENST00000641272 FAM90A16PA6NEW6 464 aa13.21□□□□□ -0.29
PHGDH-213ENST00000641272 FAM90A20PA6NIJ5 464 aa13.21□□□□□ -0.29
PHGDH-213ENST00000641272 FAM90A9PA6NNJ1 464 aa13.21□□□□□ -0.29
PHGDH-213ENST00000641272 FAM90A12PA8MX19 464 aa13.21□□□□□ -0.29
PHGDH-213ENST00000641272 FAM90A5PA8MXJ8 464 aa13.21□□□□□ -0.29
PHGDH-213ENST00000641272 HSD17B6O14756 317 aa13.21□□□□□ -0.29
PHGDH-213ENST00000641272 CDRT1O95170 752 aa13.21□□□□□ -0.29
PHGDH-213ENST00000641272 FAM90A15PP0C7V4 464 aa13.21□□□□□ -0.29
PHGDH-213ENST00000641272 FAM90A13PP0C7W8 464 aa13.21□□□□□ -0.29
PHGDH-213ENST00000641272 FAM90A14PP0C7W9 464 aa13.21□□□□□ -0.29
PHGDH-213ENST00000641272 FAM90A24PP0C7X0 464 aa13.21□□□□□ -0.29
PHGDH-213ENST00000641272 C21orf33P30042 268 aaPredicted RBP13.21□□□□□ -0.29
PHGDH-213ENST00000641272 GBX2P52951 348 aaPredicted RBP13.21□□□□□ -0.29
PHGDH-213ENST00000641272 VAX1Q5SQQ9 334 aa13.21□□□□□ -0.29
PHGDH-213ENST00000641272 XAF1Q6GPH4 301 aa13.21□□□□□ -0.29
PHGDH-213ENST00000641272 ELP2Q6IA86 826 aa13.21□□□□□ -0.29
PHGDH-213ENST00000641272 FAM53AQ6NSI3 398 aaPredicted RBP13.21□□□□□ -0.29
PHGDH-213ENST00000641272 PXT1Q8NFP0 134 aa13.21□□□□□ -0.29
PHGDH-213ENST00000641272 OR51D1Q8NGF3 324 aa13.21□□□□□ -0.29
PHGDH-213ENST00000641272 OR52I1Q8NGK6 324 aa13.21□□□□□ -0.29
PHGDH-213ENST00000641272 DPF1Q92782 380 aa13.21□□□□□ -0.29
PHGDH-213ENST00000641272 ORAI1Q96D31 301 aa13.21□□□□□ -0.29
PHGDH-213ENST00000641272 RBMXL1Q96E39 390 aaKnown RBP13.21□□□□□ -0.29
PHGDH-213ENST00000641272 JAM3Q9BX67 310 aa13.21□□□□□ -0.29
PHGDH-213ENST00000641272 MAGEB3O15480 346 aa13.2□□□□□ -0.3
PHGDH-213ENST00000641272 OR7C1O76099 320 aaPredicted RBP13.2□□□□□ -0.3
PHGDH-213ENST00000641272 DUS4LO95620 317 aaKnown RBP13.2□□□□□ -0.3
PHGDH-213ENST00000641272 FADS2O95864 444 aaKnown RBP13.2□□□□□ -0.3
PHGDH-213ENST00000641272 RPSAP08865 295 aaKnown RBP13.2□□□□□ -0.3
PHGDH-213ENST00000641272 THBS3P49746 956 aa13.2□□□□□ -0.3
PHGDH-213ENST00000641272 RAB25P57735 213 aa13.2□□□□□ -0.3
PHGDH-213ENST00000641272 SLC35E3Q7Z769 313 aa13.2□□□□□ -0.3
PHGDH-213ENST00000641272 ZNF565Q8N9K5 539 aa13.2□□□□□ -0.3
PHGDH-213ENST00000641272 SUMF2Q8NBJ7 301 aa13.2□□□□□ -0.3
PHGDH-213ENST00000641272 CPNE2Q96FN4 548 aaPredicted RBP13.2□□□□□ -0.3
PHGDH-213ENST00000641272 DPCDQ9BVM2 203 aaPredicted RBP13.2□□□□□ -0.3
PHGDH-213ENST00000641272 BARHL1Q9BZE3 327 aa13.2□□□□□ -0.3
PHGDH-213ENST00000641272 IGHV3-43A0A0B4J1X8 118 aa13.19□□□□□ -0.3
PHGDH-213ENST00000641272 A0A1W2PP11 408 aa13.19□□□□□ -0.3
PHGDH-213ENST00000641272 NPIPB11E5RHQ5 1161 aa13.19□□□□□ -0.3
PHGDH-213ENST00000641272 IGHV3-43DP0DP04 118 aa13.19□□□□□ -0.3
PHGDH-213ENST00000641272 SERPINA2P20848 420 aa13.19□□□□□ -0.3
PHGDH-213ENST00000641272 RAB7AP51149 207 aa13.19□□□□□ -0.3
PHGDH-213ENST00000641272 DDI2Q5TDH0 399 aa13.19□□□□□ -0.3
PHGDH-213ENST00000641272 LCNL1Q6ZST4 164 aa13.19□□□□□ -0.3
PHGDH-213ENST00000641272 MOB3BQ86TA1 216 aa13.19□□□□□ -0.3
PHGDH-213ENST00000641272 THNSL2Q86YJ6 484 aa13.19□□□□□ -0.3
PHGDH-213ENST00000641272 OR8H3Q8N146 312 aa13.19□□□□□ -0.3
PHGDH-213ENST00000641272 OR13C5Q8NGS8 318 aa13.19□□□□□ -0.3
PHGDH-213ENST00000641272 CHPT1Q8WUD6 406 aa13.19□□□□□ -0.3
PHGDH-213ENST00000641272 APH1BQ8WW43 257 aa13.19□□□□□ -0.3
PHGDH-213ENST00000641272 ING4Q9UNL4 249 aa13.19□□□□□ -0.3
PHGDH-213ENST00000641272 ST3GAL6Q9Y274 331 aa13.19□□□□□ -0.3
PHGDH-213ENST00000641272 KMT2CQ8NEZ4 4911 aaKnown RBP13.18□□□□□ -0.3
PHGDH-213ENST00000641272 COL7A1Q02388 2944 aa13.18□□□□□ -0.3
PHGDH-213ENST00000641272 LINC01548A6NM66 108 aa13.18□□□□□ -0.3
PHGDH-213ENST00000641272 CCRL2O00421 344 aa13.18□□□□□ -0.3
PHGDH-213ENST00000641272 FGF16O43320 207 aa13.18□□□□□ -0.3
PHGDH-213ENST00000641272 LIMS3P0CW19 117 aa13.18□□□□□ -0.3
PHGDH-213ENST00000641272 LIMS4P0CW20 117 aa13.18□□□□□ -0.3
PHGDH-213ENST00000641272 RBM11P57052 281 aaKnown RBP13.18□□□□□ -0.3
PHGDH-213ENST00000641272 CD69Q07108 199 aa13.18□□□□□ -0.3
PHGDH-213ENST00000641272 EGFEM1PQ0D2K5 195 aa13.18□□□□□ -0.3
PHGDH-213ENST00000641272 RAB40BQ12829 278 aa13.18□□□□□ -0.3
PHGDH-213ENST00000641272 SMN1Q16637 294 aaKnown RBP13.18□□□□□ -0.3
PHGDH-213ENST00000641272 DEFB136Q30KP8 78 aa13.18□□□□□ -0.3
PHGDH-213ENST00000641272 ZNF529Q6P280 563 aa13.18□□□□□ -0.3
PHGDH-213ENST00000641272 HAVCR2Q8TDQ0 301 aa13.18□□□□□ -0.3
PHGDH-213ENST00000641272 NEK7Q8TDX7 302 aa13.18□□□□□ -0.3
PHGDH-213ENST00000641272 CCDC107Q8WV48 283 aa13.18□□□□□ -0.3
PHGDH-213ENST00000641272 SLC29A1Q99808 456 aa13.18□□□□□ -0.3
PHGDH-213ENST00000641272 FAM118AQ9NWS6 357 aa13.18□□□□□ -0.3
PHGDH-213ENST00000641272 IGHV1-3A0A0C4DH29 117 aa13.17□□□□□ -0.3
PHGDH-213ENST00000641272 TMEM30CPA0ZSE6 113 aa13.17□□□□□ -0.3
PHGDH-213ENST00000641272 NCBP2LA6PVI3 153 aaKnown RBP13.17□□□□□ -0.3
PHGDH-213ENST00000641272 GEMIN2O14893 280 aaKnown RBP13.17□□□□□ -0.3
PHGDH-213ENST00000641272 CD2P06729 351 aa13.17□□□□□ -0.3
PHGDH-213ENST00000641272 SLC35B1P78383 322 aa13.17□□□□□ -0.3
PHGDH-213ENST00000641272 MRPL28Q13084 256 aaKnown RBP13.17□□□□□ -0.3
PHGDH-213ENST00000641272 ATAD3CQ5T2N8 411 aa13.17□□□□□ -0.3
PHGDH-213ENST00000641272 OR2G6Q5TZ20 316 aa13.17□□□□□ -0.3
PHGDH-213ENST00000641272 FOXRED2Q8IWF2 684 aa13.17□□□□□ -0.3
PHGDH-213ENST00000641272 STPG2Q8N412 459 aa13.17□□□□□ -0.3
PHGDH-213ENST00000641272 RHOXF1Q8NHV9 184 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms