RNA–Protein interactions for RNA: ENST00000640289.1

GTF3A-209, Transcript of general transcription factor IIIA, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,098 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-209ENST00000640289 CROCCP3Q8IVE0 287 aa10.82□□□□□ -0.68
GTF3A-209ENST00000640289 OR56B1Q8NGI3 324 aa10.82□□□□□ -0.68
GTF3A-209ENST00000640289 OR10R2Q8NGX6 335 aa10.82□□□□□ -0.68
GTF3A-209ENST00000640289 OR4K15Q8NH41 348 aa10.82□□□□□ -0.68
GTF3A-209ENST00000640289 NANPQ8TBE9 248 aa10.82□□□□□ -0.68
GTF3A-209ENST00000640289 MRGPRDQ8TDS7 321 aa10.82□□□□□ -0.68
GTF3A-209ENST00000640289 CCDC107Q8WV48 283 aa10.82□□□□□ -0.68
GTF3A-209ENST00000640289 CORO2AQ92828 525 aa10.82□□□□□ -0.68
GTF3A-209ENST00000640289 TNFRSF14Q92956 283 aa10.82□□□□□ -0.68
GTF3A-209ENST00000640289 LHX4Q969G2 390 aa10.82□□□□□ -0.68
GTF3A-209ENST00000640289 ISOC1Q96CN7 298 aa10.82□□□□□ -0.68
GTF3A-209ENST00000640289 SLC25A38Q96DW6 304 aa10.82□□□□□ -0.68
GTF3A-209ENST00000640289 ARHGAP5-AS1Q96IT6 56 aa10.82□□□□□ -0.68
GTF3A-209ENST00000640289 PECRQ9BY49 303 aa10.82□□□□□ -0.68
GTF3A-209ENST00000640289 ATG5Q9H1Y0 275 aa10.82□□□□□ -0.68
GTF3A-209ENST00000640289 UBE2J1Q9Y385 318 aaPredicted RBP10.82□□□□□ -0.68
GTF3A-209ENST00000640289 A0A075B6Q4 140 aa10.81□□□□□ -0.68
GTF3A-209ENST00000640289 CENPVL3A0A0U1RRI6 287 aa10.81□□□□□ -0.68
GTF3A-209ENST00000640289 RNASEK-C17orf49H0YIS7 233 aa10.81□□□□□ -0.68
GTF3A-209ENST00000640289 H3BMQ9 156 aa10.81□□□□□ -0.68
GTF3A-209ENST00000640289 H3BUI4 141 aa10.81□□□□□ -0.68
GTF3A-209ENST00000640289 RAB27BO00194 218 aa10.81□□□□□ -0.68
GTF3A-209ENST00000640289 MT-ND4P03905 459 aa10.81□□□□□ -0.68
GTF3A-209ENST00000640289 GLAP06280 429 aa10.81□□□□□ -0.68
GTF3A-209ENST00000640289 SRD5A1P18405 259 aa10.81□□□□□ -0.68
GTF3A-209ENST00000640289 OMGP23515 440 aa10.81□□□□□ -0.68
GTF3A-209ENST00000640289 PRTN3P24158 256 aa10.81□□□□□ -0.68
GTF3A-209ENST00000640289 GDNFP39905 211 aa10.81□□□□□ -0.68
GTF3A-209ENST00000640289 C17orf58Q2M2W7 97 aa10.81□□□□□ -0.68
GTF3A-209ENST00000640289 RUSC1-AS1Q66K80 236 aa10.81□□□□□ -0.68
GTF3A-209ENST00000640289 OLFML2AQ68BL7 652 aa10.81□□□□□ -0.68
GTF3A-209ENST00000640289 C1orf122Q6ZSJ8 110 aa10.81□□□□□ -0.68
GTF3A-209ENST00000640289 NCOR1P1Q9H4R4 102 aa10.81□□□□□ -0.68
GTF3A-209ENST00000640289 METTL8Q9H825 291 aaKnown RBP10.81□□□□□ -0.68
GTF3A-209ENST00000640289 RHBDL2Q9NX52 303 aa10.81□□□□□ -0.68
GTF3A-209ENST00000640289 OR6C3Q9NZP0 311 aa10.81□□□□□ -0.68
GTF3A-209ENST00000640289 ABRACLQ9P1F3 81 aa10.81□□□□□ -0.68
GTF3A-209ENST00000640289 AK3Q9UIJ7 227 aa10.81□□□□□ -0.68
GTF3A-209ENST00000640289 HSF4Q9ULV5 492 aa10.81□□□□□ -0.68
GTF3A-209ENST00000640289 SPATA2Q9UM82 520 aa10.81□□□□□ -0.68
GTF3A-209ENST00000640289 SOX21Q9Y651 276 aaPredicted RBP10.81□□□□□ -0.68
GTF3A-209ENST00000640289 A0A1W2PRD5 423 aa10.8□□□□□ -0.68
GTF3A-209ENST00000640289 A0A1W2PRF3 423 aa10.8□□□□□ -0.68
GTF3A-209ENST00000640289 A0A1W2PRM7 423 aa10.8□□□□□ -0.68
GTF3A-209ENST00000640289 METTL21EPA6NDL7 271 aa10.8□□□□□ -0.68
GTF3A-209ENST00000640289 CCDC160A6NGH7 325 aa10.8□□□□□ -0.68
GTF3A-209ENST00000640289 NOL3O60936 208 aaKnown RBP10.8□□□□□ -0.68
GTF3A-209ENST00000640289 CGB3P0DN86 165 aa10.8□□□□□ -0.68
GTF3A-209ENST00000640289 CGB7P0DN87 165 aa10.8□□□□□ -0.68
GTF3A-209ENST00000640289 IGHV1-8P0DP01 117 aa10.8□□□□□ -0.68
GTF3A-209ENST00000640289 GNB3P16520 340 aa10.8□□□□□ -0.68
GTF3A-209ENST00000640289 RORCP51449 518 aa10.8□□□□□ -0.68
GTF3A-209ENST00000640289 SCAND1P57086 179 aa10.8□□□□□ -0.68
GTF3A-209ENST00000640289 PRAMEF5Q5TYX0 476 aa10.8□□□□□ -0.68
GTF3A-209ENST00000640289 HCP5Q6MZN7 132 aa10.8□□□□□ -0.68
GTF3A-209ENST00000640289 BAIAP2L2Q6UXY1 529 aa10.8□□□□□ -0.68
GTF3A-209ENST00000640289 BRD3OSQ6XYD6 125 aa10.8□□□□□ -0.68
GTF3A-209ENST00000640289 C5orf24Q7Z6I8 188 aa10.8□□□□□ -0.68
GTF3A-209ENST00000640289 GAPTQ8N292 157 aa10.8□□□□□ -0.68
GTF3A-209ENST00000640289 PNKDQ8N490 385 aa10.8□□□□□ -0.68
GTF3A-209ENST00000640289 RFESDQ8TAC1 157 aa10.8□□□□□ -0.68
GTF3A-209ENST00000640289 UBALD1Q8TB05 177 aa10.8□□□□□ -0.68
GTF3A-209ENST00000640289 MRPL30Q8TCC3 161 aaKnown RBP10.8□□□□□ -0.68
GTF3A-209ENST00000640289 C22orf15Q8WYQ4 148 aa10.8□□□□□ -0.68
GTF3A-209ENST00000640289 RAB3CQ96E17 227 aa10.8□□□□□ -0.68
GTF3A-209ENST00000640289 BCL7BQ9BQE9 202 aa10.8□□□□□ -0.68
GTF3A-209ENST00000640289 HDHD3Q9BSH5 251 aaPredicted RBP10.8□□□□□ -0.68
GTF3A-209ENST00000640289 RBM38Q9H0Z9 239 aaKnown RBP10.8□□□□□ -0.68
GTF3A-209ENST00000640289 UNKLQ9H9P5 680 aaKnown RBP10.8□□□□□ -0.68
GTF3A-209ENST00000640289 ZMAT3Q9HA38 289 aaKnown RBP10.8□□□□□ -0.68
GTF3A-209ENST00000640289 TAS2R3Q9NYW6 316 aa10.8□□□□□ -0.68
GTF3A-209ENST00000640289 CALYQ9NYX4 217 aa10.8□□□□□ -0.68
GTF3A-209ENST00000640289 ZNF69Q9UC07 566 aa10.8□□□□□ -0.68
GTF3A-209ENST00000640289 NUP50Q9UKX7 468 aa10.8□□□□□ -0.68
GTF3A-209ENST00000640289 KCNK7Q9Y2U2 307 aa10.8□□□□□ -0.68
GTF3A-209ENST00000640289 ETV7Q9Y603 341 aa10.8□□□□□ -0.68
GTF3A-209ENST00000640289 FAM172BPA6NC97 362 aa10.79□□□□□ -0.68
GTF3A-209ENST00000640289 ZNF729A6NN14 1252 aaPredicted RBP10.79□□□□□ -0.68
GTF3A-209ENST00000640289 TMEM127O75204 238 aa10.79□□□□□ -0.68
GTF3A-209ENST00000640289 CA11O75493 328 aa10.79□□□□□ -0.68
GTF3A-209ENST00000640289 CLPXO76031 633 aa10.79□□□□□ -0.68
GTF3A-209ENST00000640289 RCC1P18754 421 aaPredicted RBP10.79□□□□□ -0.68
GTF3A-209ENST00000640289 COX7A1P24310 79 aa10.79□□□□□ -0.68
GTF3A-209ENST00000640289 CDK2P24941 298 aa10.79□□□□□ -0.68
GTF3A-209ENST00000640289 SSTR5P35346 364 aa10.79□□□□□ -0.68
GTF3A-209ENST00000640289 UTF1Q5T230 341 aa10.79□□□□□ -0.68
GTF3A-209ENST00000640289 GPR157Q5UAW9 335 aa10.79□□□□□ -0.68
GTF3A-209ENST00000640289 Q6ZPA2 131 aa10.79□□□□□ -0.68
GTF3A-209ENST00000640289 BCL6BQ8N143 479 aaPredicted RBP10.79□□□□□ -0.68
GTF3A-209ENST00000640289 TEX29Q8N6K0 151 aa10.79□□□□□ -0.68
GTF3A-209ENST00000640289 SAMD12Q8N8I0 201 aa10.79□□□□□ -0.68
GTF3A-209ENST00000640289 ZNF565Q8N9K5 539 aa10.79□□□□□ -0.68
GTF3A-209ENST00000640289 GAL3ST2Q9H3Q3 398 aa10.79□□□□□ -0.68
GTF3A-209ENST00000640289 COMMD3Q9UBI1 195 aa10.79□□□□□ -0.68
GTF3A-209ENST00000640289 ELF5Q9UKW6 265 aaPredicted RBP10.79□□□□□ -0.68
GTF3A-209ENST00000640289 TRAPPC2LQ9UL33 140 aa10.79□□□□□ -0.68
GTF3A-209ENST00000640289 HIVEP2P31629 2446 aa10.79□□□□□ -0.68
GTF3A-209ENST00000640289 FN1P02751 2386 aaKnown RBP10.79□□□□□ -0.68
GTF3A-209ENST00000640289 KBTBD11-OT1A0A1B0GTJ5 212 aa10.78□□□□□ -0.68
GTF3A-209ENST00000640289 hCG_1809904A0A1W2PP81 198 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms