RNA–Protein interactions for RNA: ENST00000638114.1

CACNA1A-259, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 3

Gene CACNA1A, Length 517 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-259ENST00000638114 MRGPRDQ8TDS7 321 aa13.47□□□□□ -0.25
CACNA1A-259ENST00000638114 MUL1Q969V5 352 aa13.47□□□□□ -0.25
CACNA1A-259ENST00000638114 KIRREL1Q96J84 757 aa13.47□□□□□ -0.25
CACNA1A-259ENST00000638114 PRSS22Q9GZN4 317 aa13.47□□□□□ -0.25
CACNA1A-259ENST00000638114 NCOR1P1Q9H4R4 102 aa13.47□□□□□ -0.25
CACNA1A-259ENST00000638114 PCDHB16Q9NRJ7 776 aa13.47□□□□□ -0.25
CACNA1A-259ENST00000638114 FKBP14Q9NWM8 211 aa13.47□□□□□ -0.25
CACNA1A-259ENST00000638114 A0A087X0M5 115 aa13.46□□□□□ -0.25
CACNA1A-259ENST00000638114 A0A1B0GX30 115 aa13.46□□□□□ -0.25
CACNA1A-259ENST00000638114 A0A1W2PP11 408 aa13.46□□□□□ -0.25
CACNA1A-259ENST00000638114 BUB1B-PAK6H3BSN5 160 aa13.46□□□□□ -0.25
CACNA1A-259ENST00000638114 IL1AP01583 271 aa13.46□□□□□ -0.25
CACNA1A-259ENST00000638114 MAS1P04201 325 aa13.46□□□□□ -0.25
CACNA1A-259ENST00000638114 CGB3P0DN86 165 aa13.46□□□□□ -0.25
CACNA1A-259ENST00000638114 CGB7P0DN87 165 aa13.46□□□□□ -0.25
CACNA1A-259ENST00000638114 GTF2F2P13984 249 aa13.46□□□□□ -0.25
CACNA1A-259ENST00000638114 CD24P25063 80 aa13.46□□□□□ -0.25
CACNA1A-259ENST00000638114 BRS3P32247 399 aa13.46□□□□□ -0.25
CACNA1A-259ENST00000638114 PAX5Q02548 391 aa13.46□□□□□ -0.25
CACNA1A-259ENST00000638114 DOC2BQ14184 412 aa13.46□□□□□ -0.25
CACNA1A-259ENST00000638114 LTC4SQ16873 150 aa13.46□□□□□ -0.25
CACNA1A-259ENST00000638114 UTF1Q5T230 341 aa13.46□□□□□ -0.25
CACNA1A-259ENST00000638114 ATAD3CQ5T2N8 411 aa13.46□□□□□ -0.25
CACNA1A-259ENST00000638114 HIST2H2BDQ6DRA6 164 aa13.46□□□□□ -0.25
CACNA1A-259ENST00000638114 LINC00596Q86U02 117 aa13.46□□□□□ -0.25
CACNA1A-259ENST00000638114 OR9G1Q8NH87 305 aa13.46□□□□□ -0.25
CACNA1A-259ENST00000638114 CREB3L1Q96BA8 519 aa13.46□□□□□ -0.25
CACNA1A-259ENST00000638114 DERL3Q96Q80 235 aa13.46□□□□□ -0.25
CACNA1A-259ENST00000638114 IFT22Q9H7X7 185 aa13.46□□□□□ -0.25
CACNA1A-259ENST00000638114 IDI2-AS1Q9NZ38 188 aa13.46□□□□□ -0.25
CACNA1A-259ENST00000638114 MRPS28Q9Y2Q9 187 aaKnown RBP13.46□□□□□ -0.25
CACNA1A-259ENST00000638114 TRAV39A0A0B4J263 110 aa13.45□□□□□ -0.26
CACNA1A-259ENST00000638114 FAM90A22PA8MWA6 464 aa13.45□□□□□ -0.26
CACNA1A-259ENST00000638114 PTGES3LE9PB15 166 aa13.45□□□□□ -0.26
CACNA1A-259ENST00000638114 IGHV3-7P01780 117 aa13.45□□□□□ -0.26
CACNA1A-259ENST00000638114 CD1AP06126 327 aa13.45□□□□□ -0.26
CACNA1A-259ENST00000638114 CDK1P06493 297 aa13.45□□□□□ -0.26
CACNA1A-259ENST00000638114 CSF1P09603 554 aa13.45□□□□□ -0.26
CACNA1A-259ENST00000638114 AQP4P55087 323 aa13.45□□□□□ -0.26
CACNA1A-259ENST00000638114 GPR176Q14439 515 aa13.45□□□□□ -0.26
CACNA1A-259ENST00000638114 MPV17LQ2QL34 196 aa13.45□□□□□ -0.26
CACNA1A-259ENST00000638114 TPTE2P1Q5T6R2 138 aa13.45□□□□□ -0.26
CACNA1A-259ENST00000638114 Q8N2B8 174 aa13.45□□□□□ -0.26
CACNA1A-259ENST00000638114 RFESDQ8TAC1 157 aa13.45□□□□□ -0.26
CACNA1A-259ENST00000638114 FAM110DQ8TAY7 271 aaPredicted RBP13.45□□□□□ -0.26
CACNA1A-259ENST00000638114 NEK7Q8TDX7 302 aa13.45□□□□□ -0.26
CACNA1A-259ENST00000638114 CAPSLQ8WWF8 208 aa13.45□□□□□ -0.26
CACNA1A-259ENST00000638114 LEAP2Q969E1 77 aa13.45□□□□□ -0.26
CACNA1A-259ENST00000638114 SERTAD4Q9NUC0 356 aa13.45□□□□□ -0.26
CACNA1A-259ENST00000638114 TMEM30CPA0ZSE6 113 aa13.44□□□□□ -0.26
CACNA1A-259ENST00000638114 PIN1P1O15428 100 aa13.44□□□□□ -0.26
CACNA1A-259ENST00000638114 WIPF1O43516 503 aa13.44□□□□□ -0.26
CACNA1A-259ENST00000638114 PEX14O75381 377 aa13.44□□□□□ -0.26
CACNA1A-259ENST00000638114 MAPK3P27361 379 aaPredicted RBP13.44□□□□□ -0.26
CACNA1A-259ENST00000638114 SSTR5P35346 364 aa13.44□□□□□ -0.26
CACNA1A-259ENST00000638114 C6orf141Q5SZD1 244 aa13.44□□□□□ -0.26
CACNA1A-259ENST00000638114 AWAT2Q6E213 333 aa13.44□□□□□ -0.26
CACNA1A-259ENST00000638114 GLIPR1L1Q6UWM5 242 aa13.44□□□□□ -0.26
CACNA1A-259ENST00000638114 NRG4Q8WWG1 115 aa13.44□□□□□ -0.26
CACNA1A-259ENST00000638114 THRSPQ92748 146 aa13.44□□□□□ -0.26
CACNA1A-259ENST00000638114 MYDGFQ969H8 173 aa13.44□□□□□ -0.26
CACNA1A-259ENST00000638114 OR5M11Q96RB7 305 aa13.44□□□□□ -0.26
CACNA1A-259ENST00000638114 MND1Q9BWT6 205 aa13.44□□□□□ -0.26
CACNA1A-259ENST00000638114 MMP28Q9H239 520 aa13.44□□□□□ -0.26
CACNA1A-259ENST00000638114 LINC00574Q9H8X3 128 aa13.44□□□□□ -0.26
CACNA1A-259ENST00000638114 SCN3BQ9NY72 215 aa13.44□□□□□ -0.26
CACNA1A-259ENST00000638114 AMMECR1Q9Y4X0 333 aaPredicted RBP13.44□□□□□ -0.26
CACNA1A-259ENST00000638114 NPIPB11E5RHQ5 1161 aa13.43□□□□□ -0.26
CACNA1A-259ENST00000638114 MNDAP41218 407 aa13.43□□□□□ -0.26
CACNA1A-259ENST00000638114 GNG10P50151 68 aa13.43□□□□□ -0.26
CACNA1A-259ENST00000638114 BLCAPP62952 87 aa13.43□□□□□ -0.26
CACNA1A-259ENST00000638114 DEFA6Q01524 100 aa13.43□□□□□ -0.26
CACNA1A-259ENST00000638114 GABPB1Q06547 395 aaPredicted RBP13.43□□□□□ -0.26
CACNA1A-259ENST00000638114 CCDC144NLQ6NUI1 221 aa13.43□□□□□ -0.26
CACNA1A-259ENST00000638114 Q6ZS46 218 aa13.43□□□□□ -0.26
CACNA1A-259ENST00000638114 C16orf82Q7Z2V1 217 aa13.43□□□□□ -0.26
CACNA1A-259ENST00000638114 CFHR4Q92496 578 aa13.43□□□□□ -0.26
CACNA1A-259ENST00000638114 TOMM40LQ969M1 308 aa13.43□□□□□ -0.26
CACNA1A-259ENST00000638114 RPEQ96AT9 228 aa13.43□□□□□ -0.26
CACNA1A-259ENST00000638114 AKR1E2Q96JD6 320 aa13.43□□□□□ -0.26
CACNA1A-259ENST00000638114 PSG11Q9UQ72 335 aa13.43□□□□□ -0.26
CACNA1A-259ENST00000638114 NOTCH1P46531 2555 aa13.43□□□□□ -0.26
CACNA1A-259ENST00000638114 OOSP1A8MZH6 123 aa13.42□□□□□ -0.26
CACNA1A-259ENST00000638114 LY6LH3BQJ8 138 aa13.42□□□□□ -0.26
CACNA1A-259ENST00000638114 J3QR06 171 aa13.42□□□□□ -0.26
CACNA1A-259ENST00000638114 KCNAB3O43448 404 aa13.42□□□□□ -0.26
CACNA1A-259ENST00000638114 VDAC2P45880 294 aaPredicted RBP13.42□□□□□ -0.26
CACNA1A-259ENST00000638114 INSL4Q14641 139 aa13.42□□□□□ -0.26
CACNA1A-259ENST00000638114 TMEM95Q3KNT9 176 aa13.42□□□□□ -0.26
CACNA1A-259ENST00000638114 RNLSQ5VYX0 342 aa13.42□□□□□ -0.26
CACNA1A-259ENST00000638114 CDH26Q8IXH8 852 aa13.42□□□□□ -0.26
CACNA1A-259ENST00000638114 NKAIN3Q8N8D7 197 aa13.42□□□□□ -0.26
CACNA1A-259ENST00000638114 OR10A7Q8NGE5 316 aa13.42□□□□□ -0.26
CACNA1A-259ENST00000638114 CCDC107Q8WV48 283 aa13.42□□□□□ -0.26
CACNA1A-259ENST00000638114 MRPS24Q96EL2 167 aaKnown RBP13.42□□□□□ -0.26
CACNA1A-259ENST00000638114 SLC25A33Q9BSK2 321 aa13.42□□□□□ -0.26
CACNA1A-259ENST00000638114 BANF2Q9H503 90 aa13.42□□□□□ -0.26
CACNA1A-259ENST00000638114 LIN7BQ9HAP6 207 aa13.42□□□□□ -0.26
CACNA1A-259ENST00000638114 SPACA1Q9HBV2 294 aa13.42□□□□□ -0.26
CACNA1A-259ENST00000638114 FBXO24O75426 580 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms