RNA–Protein interactions for RNA: ENST00000638009.1

CACNA1A-257, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1A, Length 8,665 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-257ENST00000638009 LEPROTL1O95214 131 aa17.23■□□□□ 0.35
CACNA1A-257ENST00000638009 C1SP09871 688 aa17.23■□□□□ 0.35
CACNA1A-257ENST00000638009 SAMD13Q5VXD3 122 aa17.23■□□□□ 0.35
CACNA1A-257ENST00000638009 SPACA5Q96QH8 159 aa17.23■□□□□ 0.35
CACNA1A-257ENST00000638009 SIRT5Q9NXA8 310 aa17.23■□□□□ 0.35
CACNA1A-257ENST00000638009 OR5AC2Q9NZP5 309 aa17.23■□□□□ 0.35
CACNA1A-257ENST00000638009 C19orf67A6NJJ6 358 aa17.23■□□□□ 0.35
CACNA1A-257ENST00000638009 FAM157CP0CG43 387 aa17.23■□□□□ 0.35
CACNA1A-257ENST00000638009 FGF9P31371 208 aaPredicted RBP17.23■□□□□ 0.35
CACNA1A-257ENST00000638009 TMEM78Q5T7P6 136 aa17.23■□□□□ 0.35
CACNA1A-257ENST00000638009 OVCH2Q7RTZ1 564 aa17.23■□□□□ 0.35
CACNA1A-257ENST00000638009 BATF2Q8N1L9 274 aa17.23■□□□□ 0.35
CACNA1A-257ENST00000638009 FAM181BA6NEQ2 426 aa17.22■□□□□ 0.35
CACNA1A-257ENST00000638009 RTP2Q5QGT7 225 aa17.22■□□□□ 0.35
CACNA1A-257ENST00000638009 WDR25Q64LD2 544 aaPredicted RBP17.22■□□□□ 0.35
CACNA1A-257ENST00000638009 DPH3Q96FX2 82 aa17.22■□□□□ 0.35
CACNA1A-257ENST00000638009 LOC389332A0A1B0GUA5 103 aa17.22■□□□□ 0.35
CACNA1A-257ENST00000638009 B4GALT1P15291 398 aa17.22■□□□□ 0.35
CACNA1A-257ENST00000638009 LRRC75BQ2VPJ9 315 aa17.22■□□□□ 0.35
CACNA1A-257ENST00000638009 TEX30Q5JUR7 227 aa17.22■□□□□ 0.35
CACNA1A-257ENST00000638009 TMEM211Q6ICI0 200 aa17.22■□□□□ 0.35
CACNA1A-257ENST00000638009 SLC16A13Q7RTY0 426 aa17.22■□□□□ 0.35
CACNA1A-257ENST00000638009 CLN8Q9UBY8 286 aa17.22■□□□□ 0.35
CACNA1A-257ENST00000638009 DAPP1Q9UN19 280 aa17.22■□□□□ 0.35
CACNA1A-257ENST00000638009 H3BMH7 237 aa17.22■□□□□ 0.35
CACNA1A-257ENST00000638009 ARSAP15289 507 aa17.22■□□□□ 0.35
CACNA1A-257ENST00000638009 PFN3P60673 137 aa17.22■□□□□ 0.35
CACNA1A-257ENST00000638009 ROM1Q03395 351 aa17.22■□□□□ 0.35
CACNA1A-257ENST00000638009 INSM2Q96T92 566 aaPredicted RBP17.22■□□□□ 0.35
CACNA1A-257ENST00000638009 CTXND1A0A1B0GTU2 59 aa17.22■□□□□ 0.35
CACNA1A-257ENST00000638009 HOXD9P28356 352 aaPredicted RBP17.22■□□□□ 0.35
CACNA1A-257ENST00000638009 WDFY2Q96P53 400 aa17.22■□□□□ 0.35
CACNA1A-257ENST00000638009 BCL2L10Q9HD36 194 aa17.22■□□□□ 0.35
CACNA1A-257ENST00000638009 LPAR6P43657 344 aa17.22■□□□□ 0.35
CACNA1A-257ENST00000638009 ZNF345Q14585 488 aa17.22■□□□□ 0.35
CACNA1A-257ENST00000638009 GHITMQ9H3K2 345 aa17.22■□□□□ 0.35
CACNA1A-257ENST00000638009 AUNIPQ9H7T9 357 aa17.22■□□□□ 0.35
CACNA1A-257ENST00000638009 ANKRD10Q9NXR5 420 aa17.22■□□□□ 0.35
CACNA1A-257ENST00000638009 AUP1Q9Y679 476 aa17.22■□□□□ 0.35
CACNA1A-257ENST00000638009 SOD3P08294 240 aa17.22■□□□□ 0.35
CACNA1A-257ENST00000638009 TMUB1Q9BVT8 246 aa17.22■□□□□ 0.35
CACNA1A-257ENST00000638009 SOCS7O14512 581 aa17.22■□□□□ 0.35
CACNA1A-257ENST00000638009 TM4SF1P30408 202 aa17.22■□□□□ 0.35
CACNA1A-257ENST00000638009 KCNAB1Q14722 419 aa17.22■□□□□ 0.35
CACNA1A-257ENST00000638009 FLYWCH2Q96CP2 140 aaKnown RBP17.22■□□□□ 0.35
CACNA1A-257ENST00000638009 VN1R1Q9GZP7 353 aa17.22■□□□□ 0.35
CACNA1A-257ENST00000638009 PLPP2O43688 288 aa17.21■□□□□ 0.35
CACNA1A-257ENST00000638009 PDCD6O75340 191 aa17.21■□□□□ 0.35
CACNA1A-257ENST00000638009 FHITP49789 147 aa17.21■□□□□ 0.35
CACNA1A-257ENST00000638009 PHLDA1Q8WV24 401 aaPredicted RBP17.21■□□□□ 0.35
CACNA1A-257ENST00000638009 PXNP49023 591 aaPredicted RBP17.21■□□□□ 0.35
CACNA1A-257ENST00000638009 MFAP2P55001 183 aa17.21■□□□□ 0.35
CACNA1A-257ENST00000638009 C1orf174Q8IYL3 243 aa17.21■□□□□ 0.35
CACNA1A-257ENST00000638009 YIPF6Q96EC8 236 aa17.21■□□□□ 0.35
CACNA1A-257ENST00000638009 FCGR3AP08637 254 aa17.21■□□□□ 0.35
CACNA1A-257ENST00000638009 SRSF5Q13243 272 aaKnown RBP17.21■□□□□ 0.35
CACNA1A-257ENST00000638009 RSRP1Q9BUV0 290 aa17.21■□□□□ 0.35
CACNA1A-257ENST00000638009 PPP1R1AQ13522 171 aa17.21■□□□□ 0.35
CACNA1A-257ENST00000638009 ZNF683Q8IZ20 524 aa17.21■□□□□ 0.35
CACNA1A-257ENST00000638009 USP54Q70EL1 1684 aa17.21■□□□□ 0.34
CACNA1A-257ENST00000638009 POLR2IP36954 125 aaKnown RBP17.2■□□□□ 0.34
CACNA1A-257ENST00000638009 NTHL1P78549 312 aa17.2■□□□□ 0.34
CACNA1A-257ENST00000638009 TM4SF20Q53R12 229 aa17.2■□□□□ 0.34
CACNA1A-257ENST00000638009 NKAIN2Q5VXU1 208 aa17.2■□□□□ 0.34
CACNA1A-257ENST00000638009 MRGPREQ86SM8 312 aa17.2■□□□□ 0.34
CACNA1A-257ENST00000638009 TMEM99Q8N816 258 aa17.2■□□□□ 0.34
CACNA1A-257ENST00000638009 OR10AC1Q8NH08 325 aa17.2■□□□□ 0.34
CACNA1A-257ENST00000638009 KBTBD11O94819 623 aa17.2■□□□□ 0.34
CACNA1A-257ENST00000638009 LPAL2Q16609 132 aa17.2■□□□□ 0.34
CACNA1A-257ENST00000638009 OR2K2Q8NGT1 345 aa17.2■□□□□ 0.34
CACNA1A-257ENST00000638009 NRIP2Q9BQI9 281 aa17.2■□□□□ 0.34
CACNA1A-257ENST00000638009 KCNE5Q9UJ90 142 aa17.2■□□□□ 0.34
CACNA1A-257ENST00000638009 CA5BP1Q8WTZ4 195 aa17.2■□□□□ 0.34
CACNA1A-257ENST00000638009 AICDAQ9GZX7 198 aa17.2■□□□□ 0.34
CACNA1A-257ENST00000638009 LRP12Q9Y561 859 aa17.2■□□□□ 0.34
CACNA1A-257ENST00000638009 SNED1Q8TER0 1413 aa17.2■□□□□ 0.34
CACNA1A-257ENST00000638009 LRRC75AQ8NAA5 344 aa17.2■□□□□ 0.34
CACNA1A-257ENST00000638009 SGMS2Q8NHU3 365 aa17.2■□□□□ 0.34
CACNA1A-257ENST00000638009 MORN1Q5T089 497 aa17.2■□□□□ 0.34
CACNA1A-257ENST00000638009 VN1R2Q8NFZ6 395 aa17.2■□□□□ 0.34
CACNA1A-257ENST00000638009 SLC25A40Q8TBP6 338 aa17.2■□□□□ 0.34
CACNA1A-257ENST00000638009 ARHGAP5-AS1Q96IT6 56 aa17.2■□□□□ 0.34
CACNA1A-257ENST00000638009 ZBTB42B2RXF5 422 aa17.2■□□□□ 0.34
CACNA1A-257ENST00000638009 ZNF506Q5JVG8 444 aa17.2■□□□□ 0.34
CACNA1A-257ENST00000638009 MAMSTRQ6ZN01 415 aa17.2■□□□□ 0.34
CACNA1A-257ENST00000638009 LINC00469Q8N7U9 141 aa17.2■□□□□ 0.34
CACNA1A-257ENST00000638009 MFAP4P55083 255 aa17.19■□□□□ 0.34
CACNA1A-257ENST00000638009 PITX1P78337 314 aaPredicted RBP17.19■□□□□ 0.34
CACNA1A-257ENST00000638009 BCDIN3DQ7Z5W3 292 aaKnown RBP17.19■□□□□ 0.34
CACNA1A-257ENST00000638009 ASCL3Q9NQ33 180 aa17.19■□□□□ 0.34
CACNA1A-257ENST00000638009 PARP11Q9NR21 331 aa17.19■□□□□ 0.34
CACNA1A-257ENST00000638009 TMEM255AQ5JRV8 349 aa17.19■□□□□ 0.34
CACNA1A-257ENST00000638009 MEIG1Q5JSS6 88 aa17.19■□□□□ 0.34
CACNA1A-257ENST00000638009 MRGPRX3Q96LB0 322 aa17.19■□□□□ 0.34
CACNA1A-257ENST00000638009 PPM1DO15297 605 aa17.19■□□□□ 0.34
CACNA1A-257ENST00000638009 SNAI1O95863 264 aaPredicted RBP17.19■□□□□ 0.34
CACNA1A-257ENST00000638009 FGF5P12034 268 aa17.19■□□□□ 0.34
CACNA1A-257ENST00000638009 TINAGL1Q9GZM7 467 aaPredicted RBP17.19■□□□□ 0.34
CACNA1A-257ENST00000638009 RBMY1BA6NDE4 496 aaKnown RBP17.19■□□□□ 0.34
CACNA1A-257ENST00000638009 RBMY1EA6NEQ0 496 aaKnown RBP17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms