RNA–Protein interactions for RNA: ENST00000637329.1

CLN6-219, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,204 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-219ENST00000637329 IGKV1D-8A0A087WSZ0 117 aa12.85□□□□□ -0.35
CLN6-219ENST00000637329 TRAV38-1A0A0B4J264 116 aa12.85□□□□□ -0.35
CLN6-219ENST00000637329 NKX6-3A6NJ46 265 aa12.85□□□□□ -0.35
CLN6-219ENST00000637329 TRDCB7Z8K6 153 aa12.85□□□□□ -0.35
CLN6-219ENST00000637329 C3orf80F5H4A9 247 aa12.85□□□□□ -0.35
CLN6-219ENST00000637329 TMEM178BH3BS89 294 aa12.85□□□□□ -0.35
CLN6-219ENST00000637329 LGALS8O00214 317 aa12.85□□□□□ -0.35
CLN6-219ENST00000637329 ARPC1BO15143 372 aaKnown RBP12.85□□□□□ -0.35
CLN6-219ENST00000637329 FABP7O15540 132 aa12.85□□□□□ -0.35
CLN6-219ENST00000637329 CYB5R3P00387 301 aaPredicted RBP12.85□□□□□ -0.35
CLN6-219ENST00000637329 IL5P05113 134 aa12.85□□□□□ -0.35
CLN6-219ENST00000637329 COL8A1P27658 744 aa12.85□□□□□ -0.35
CLN6-219ENST00000637329 GLP1RP43220 463 aa12.85□□□□□ -0.35
CLN6-219ENST00000637329 TSPAN5P62079 268 aa12.85□□□□□ -0.35
CLN6-219ENST00000637329 MRPS11P82912 194 aaKnown RBP12.85□□□□□ -0.35
CLN6-219ENST00000637329 ATXN7L3Q14CW9 347 aaPredicted RBP12.85□□□□□ -0.35
CLN6-219ENST00000637329 METTL11BQ5VVY1 283 aa12.85□□□□□ -0.35
CLN6-219ENST00000637329 TRAT1Q6PIZ9 186 aa12.85□□□□□ -0.35
CLN6-219ENST00000637329 C17orf107Q6ZR85 190 aa12.85□□□□□ -0.35
CLN6-219ENST00000637329 ASCC1Q8N9N2 400 aaKnown RBP12.85□□□□□ -0.35
CLN6-219ENST00000637329 BOLLQ8N9W6 283 aaKnown RBP12.85□□□□□ -0.35
CLN6-219ENST00000637329 OR4A4PQ8NGN8 299 aa12.85□□□□□ -0.35
CLN6-219ENST00000637329 OR13C8Q8NGS7 320 aa12.85□□□□□ -0.35
CLN6-219ENST00000637329 TERB2Q8NHR7 220 aa12.85□□□□□ -0.35
CLN6-219ENST00000637329 CCDC107Q8WV48 283 aa12.85□□□□□ -0.35
CLN6-219ENST00000637329 GIMAP1Q8WWP7 306 aa12.85□□□□□ -0.35
CLN6-219ENST00000637329 SNX22Q96L94 193 aa12.85□□□□□ -0.35
CLN6-219ENST00000637329 SCGB3A2Q96PL1 93 aa12.85□□□□□ -0.35
CLN6-219ENST00000637329 CABLES2Q9BTV7 478 aa12.85□□□□□ -0.35
CLN6-219ENST00000637329 TRAF4Q9BUZ4 470 aaPredicted RBP12.85□□□□□ -0.35
CLN6-219ENST00000637329 RAB1BQ9H0U4 201 aa12.85□□□□□ -0.35
CLN6-219ENST00000637329 FAM234AQ9H0X4 552 aa12.85□□□□□ -0.35
CLN6-219ENST00000637329 ALX4Q9H161 411 aaPredicted RBP12.85□□□□□ -0.35
CLN6-219ENST00000637329 ALG5Q9Y673 324 aa12.85□□□□□ -0.35
CLN6-219ENST00000637329 TMEM82A0PJX8 343 aa12.84□□□□□ -0.35
CLN6-219ENST00000637329 NPIPB11E5RHQ5 1161 aa12.84□□□□□ -0.35
CLN6-219ENST00000637329 MGST3O14880 152 aa12.84□□□□□ -0.35
CLN6-219ENST00000637329 PFDN1O60925 122 aa12.84□□□□□ -0.35
CLN6-219ENST00000637329 OR5H8P0DN80 308 aa12.84□□□□□ -0.35
CLN6-219ENST00000637329 FPR2P25090 351 aa12.84□□□□□ -0.35
CLN6-219ENST00000637329 KCNJ8Q15842 424 aa12.84□□□□□ -0.35
CLN6-219ENST00000637329 ATPAF1Q5TC12 328 aaPredicted RBP12.84□□□□□ -0.35
CLN6-219ENST00000637329 PEG10Q86TG7 708 aaKnown RBP12.84□□□□□ -0.35
CLN6-219ENST00000637329 ZCCHC24Q8N2G6 241 aaKnown RBP12.84□□□□□ -0.35
CLN6-219ENST00000637329 NEU4Q8WWR8 484 aaPredicted RBP12.84□□□□□ -0.35
CLN6-219ENST00000637329 PPP1R14BQ96C90 147 aa12.84□□□□□ -0.35
CLN6-219ENST00000637329 MED30Q96HR3 178 aa12.84□□□□□ -0.35
CLN6-219ENST00000637329 NCOR1P1Q9H4R4 102 aa12.84□□□□□ -0.35
CLN6-219ENST00000637329 PPIAL4EA0A075B759 164 aa12.83□□□□□ -0.36
CLN6-219ENST00000637329 PPIAL4DF5H284 164 aa12.83□□□□□ -0.36
CLN6-219ENST00000637329 HPXP02790 462 aa12.83□□□□□ -0.36
CLN6-219ENST00000637329 PPIAL4FP0DN26 164 aa12.83□□□□□ -0.36
CLN6-219ENST00000637329 TAS2R31P59538 309 aa12.83□□□□□ -0.36
CLN6-219ENST00000637329 UBE2MP61081 183 aaKnown RBP12.83□□□□□ -0.36
CLN6-219ENST00000637329 SEC61A1P61619 476 aaKnown RBP12.83□□□□□ -0.36
CLN6-219ENST00000637329 HOXA4Q00056 320 aaPredicted RBP12.83□□□□□ -0.36
CLN6-219ENST00000637329 HMGN3Q15651 99 aa12.83□□□□□ -0.36
CLN6-219ENST00000637329 HFEQ30201 348 aa12.83□□□□□ -0.36
CLN6-219ENST00000637329 C6orf183Q5T699 404 aa12.83□□□□□ -0.36
CLN6-219ENST00000637329 ZNF660Q6AZW8 331 aaPredicted RBP12.83□□□□□ -0.36
CLN6-219ENST00000637329 DHRS11Q6UWP2 260 aa12.83□□□□□ -0.36
CLN6-219ENST00000637329 ZNF788Q6ZQV5 615 aa12.83□□□□□ -0.36
CLN6-219ENST00000637329 OR5D13Q8NGL4 314 aa12.83□□□□□ -0.36
CLN6-219ENST00000637329 OR6F1Q8NGZ6 308 aa12.83□□□□□ -0.36
CLN6-219ENST00000637329 MRGPRFQ96AM1 343 aa12.83□□□□□ -0.36
CLN6-219ENST00000637329 COQ2Q96H96 371 aa12.83□□□□□ -0.36
CLN6-219ENST00000637329 VRK1Q99986 396 aaPredicted RBP12.83□□□□□ -0.36
CLN6-219ENST00000637329 SHARPINQ9H0F6 387 aa12.83□□□□□ -0.36
CLN6-219ENST00000637329 GHITMQ9H3K2 345 aa12.83□□□□□ -0.36
CLN6-219ENST00000637329 ZNF665Q9H7R5 613 aa12.83□□□□□ -0.36
CLN6-219ENST00000637329 GPN1Q9HCN4 374 aaPredicted RBP12.83□□□□□ -0.36
CLN6-219ENST00000637329 DLL4Q9NR61 685 aa12.83□□□□□ -0.36
CLN6-219ENST00000637329 TRAPPC2LQ9UL33 140 aa12.83□□□□□ -0.36
CLN6-219ENST00000637329 PCDHB10Q9UN67 800 aa12.83□□□□□ -0.36
CLN6-219ENST00000637329 FLVCR2Q9UPI3 526 aa12.83□□□□□ -0.36
CLN6-219ENST00000637329 PPIAL4AQ9Y536 164 aa12.83□□□□□ -0.36
CLN6-219ENST00000637329 RAI1Q7Z5J4 1906 aaPredicted RBP12.83□□□□□ -0.36
CLN6-219ENST00000637329 IGHV3OR15-7A0A075B7D8 119 aa12.82□□□□□ -0.36
CLN6-219ENST00000637329 SNRPGP15A8MWD9 76 aa12.82□□□□□ -0.36
CLN6-219ENST00000637329 K7N7A8 449 aa12.82□□□□□ -0.36
CLN6-219ENST00000637329 SIGLEC5O15389 551 aa12.82□□□□□ -0.36
CLN6-219ENST00000637329 CD8AP01732 235 aa12.82□□□□□ -0.36
CLN6-219ENST00000637329 TK1P04183 234 aa12.82□□□□□ -0.36
CLN6-219ENST00000637329 SOD3P08294 240 aa12.82□□□□□ -0.36
CLN6-219ENST00000637329 GSTT2P0CG29 244 aa12.82□□□□□ -0.36
CLN6-219ENST00000637329 RNF224P0DH78 156 aa12.82□□□□□ -0.36
CLN6-219ENST00000637329 ERP29P30040 261 aaKnown RBP12.82□□□□□ -0.36
CLN6-219ENST00000637329 GABRA2P47869 451 aa12.82□□□□□ -0.36
CLN6-219ENST00000637329 RAB25P57735 213 aa12.82□□□□□ -0.36
CLN6-219ENST00000637329 IL13RA1P78552 427 aa12.82□□□□□ -0.36
CLN6-219ENST00000637329 TLE4Q04727 773 aa12.82□□□□□ -0.36
CLN6-219ENST00000637329 KRBOX4Q5JUW0 171 aa12.82□□□□□ -0.36
CLN6-219ENST00000637329 AADACL3Q5VUY0 350 aa12.82□□□□□ -0.36
CLN6-219ENST00000637329 FAHD2BQ6P2I3 314 aaPredicted RBP12.82□□□□□ -0.36
CLN6-219ENST00000637329 GLDNQ6ZMI3 551 aaPredicted RBP12.82□□□□□ -0.36
CLN6-219ENST00000637329 C20orf204Q6ZNR8 217 aa12.82□□□□□ -0.36
CLN6-219ENST00000637329 CCL17Q92583 94 aa12.82□□□□□ -0.36
CLN6-219ENST00000637329 FAHD2AQ96GK7 314 aa12.82□□□□□ -0.36
CLN6-219ENST00000637329 GAFA1Q96PS6 74 aa12.82□□□□□ -0.36
CLN6-219ENST00000637329 OPN4Q9UHM6 478 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms