RNA–Protein interactions for RNA: ENST00000637033.1

CHRNA7-223, Transcript of cholinergic receptor nicotinic alpha 7 subunit, human

TSL 5 BASIC

Gene CHRNA7, Length 3,204 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHRNA7-223	ENST00000637033	GTF3C1	Q12789	2109 aa		11.2	□□□□□ -0.62
CHRNA7-223	ENST00000637033	SCAF4	O95104	1147 aa	Known RBP	11.2	□□□□□ -0.62
CHRNA7-223	ENST00000637033	TK1	P04183	234 aa		11.2	□□□□□ -0.62
CHRNA7-223	ENST00000637033	PGA5	P0DJD9	388 aa		11.2	□□□□□ -0.62
CHRNA7-223	ENST00000637033	HOXB1	P14653	301 aa	Predicted RBP	11.2	□□□□□ -0.62
CHRNA7-223	ENST00000637033	LIF	P15018	202 aa		11.2	□□□□□ -0.62
CHRNA7-223	ENST00000637033	FUT3	P21217	361 aa		11.2	□□□□□ -0.62
CHRNA7-223	ENST00000637033	OTX2	P32243	289 aa		11.2	□□□□□ -0.62
CHRNA7-223	ENST00000637033	RAB5C	P51148	216 aa		11.2	□□□□□ -0.62
CHRNA7-223	ENST00000637033	HERPUD1	Q15011	391 aa		11.2	□□□□□ -0.62
CHRNA7-223	ENST00000637033	ARL6IP1	Q15041	203 aa		11.2	□□□□□ -0.62
CHRNA7-223	ENST00000637033	TESK1	Q15569	626 aa		11.2	□□□□□ -0.62
CHRNA7-223	ENST00000637033	SPATA46	Q5T0L3	261 aa		11.2	□□□□□ -0.62
CHRNA7-223	ENST00000637033	LRP11	Q86VZ4	500 aa		11.2	□□□□□ -0.62
CHRNA7-223	ENST00000637033	ZNF610	Q8N9Z0	462 aa		11.2	□□□□□ -0.62
CHRNA7-223	ENST00000637033	FRZB	Q92765	325 aa		11.2	□□□□□ -0.62
CHRNA7-223	ENST00000637033	TMEM54	Q969K7	222 aa		11.2	□□□□□ -0.62
CHRNA7-223	ENST00000637033	FOXB1	Q99853	325 aa		11.2	□□□□□ -0.62
CHRNA7-223	ENST00000637033	TMEM222	Q9H0R3	208 aa		11.2	□□□□□ -0.62
CHRNA7-223	ENST00000637033	SYNGR1	O43759	233 aa		11.2	□□□□□ -0.62
CHRNA7-223	ENST00000637033	NGF	P01138	241 aa		11.2	□□□□□ -0.62
CHRNA7-223	ENST00000637033	SELE	P16581	610 aa		11.2	□□□□□ -0.62
CHRNA7-223	ENST00000637033	RBM11	P57052	281 aa	Known RBP	11.2	□□□□□ -0.62
CHRNA7-223	ENST00000637033	ZXDA	P98168	799 aa		11.2	□□□□□ -0.62
CHRNA7-223	ENST00000637033	ZNF266	Q14584	549 aa		11.2	□□□□□ -0.62
CHRNA7-223	ENST00000637033	FAM27B	Q5VT28	67 aa		11.2	□□□□□ -0.62
CHRNA7-223	ENST00000637033	FAM53A	Q6NSI3	398 aa	Predicted RBP	11.2	□□□□□ -0.62
CHRNA7-223	ENST00000637033	ZNF100	Q8IYN0	542 aa		11.2	□□□□□ -0.62
CHRNA7-223	ENST00000637033	FADS6	Q8N9I5	356 aa		11.2	□□□□□ -0.62
CHRNA7-223	ENST00000637033	CCDC71L	Q8N9Z2	235 aa		11.2	□□□□□ -0.62
CHRNA7-223	ENST00000637033	SPSB1	Q96BD6	273 aa		11.2	□□□□□ -0.62
CHRNA7-223	ENST00000637033	PLEKHF2	Q9H8W4	249 aa		11.2	□□□□□ -0.62
CHRNA7-223	ENST00000637033	PISD	Q9UG56	409 aa		11.2	□□□□□ -0.62
CHRNA7-223	ENST00000637033	STRAP	Q9Y3F4	350 aa	Known RBP	11.2	□□□□□ -0.62
CHRNA7-223	ENST00000637033	TMED3	Q9Y3Q3	217 aa		11.2	□□□□□ -0.62
CHRNA7-223	ENST00000637033	IGLV3-12	A0A075B6K2	115 aa		11.19	□□□□□ -0.62
CHRNA7-223	ENST00000637033		A0A1B0GV90	55 aa		11.19	□□□□□ -0.62
CHRNA7-223	ENST00000637033	C5orf49	A4QMS7	147 aa		11.19	□□□□□ -0.62
CHRNA7-223	ENST00000637033	HSPA12A	O43301	675 aa		11.19	□□□□□ -0.62
CHRNA7-223	ENST00000637033	CFI	P05156	583 aa		11.19	□□□□□ -0.62
CHRNA7-223	ENST00000637033	TRGC1	P0CF51	173 aa		11.19	□□□□□ -0.62
CHRNA7-223	ENST00000637033	CRYGS	P22914	178 aa		11.19	□□□□□ -0.62
CHRNA7-223	ENST00000637033	OTX1	P32242	354 aa	Predicted RBP	11.19	□□□□□ -0.62
CHRNA7-223	ENST00000637033	NKX6-1	P78426	367 aa	Predicted RBP	11.19	□□□□□ -0.62
CHRNA7-223	ENST00000637033	DEFA6	Q01524	100 aa		11.19	□□□□□ -0.62
CHRNA7-223	ENST00000637033	PCOLCE	Q15113	449 aa		11.19	□□□□□ -0.62
CHRNA7-223	ENST00000637033	RPS19BP1	Q86WX3	136 aa	Known RBP	11.19	□□□□□ -0.62
CHRNA7-223	ENST00000637033	WNT5B	Q9H1J7	359 aa		11.19	□□□□□ -0.62
CHRNA7-223	ENST00000637033	LILRA1	O75019	489 aa		11.19	□□□□□ -0.62
CHRNA7-223	ENST00000637033	PSG2	P11465	335 aa		11.19	□□□□□ -0.62
CHRNA7-223	ENST00000637033	CTSS	P25774	331 aa		11.19	□□□□□ -0.62
CHRNA7-223	ENST00000637033	ECI1	P42126	302 aa		11.19	□□□□□ -0.62
CHRNA7-223	ENST00000637033	DAZAP2	Q15038	168 aa	Predicted RBP	11.19	□□□□□ -0.62
CHRNA7-223	ENST00000637033	RAB30	Q15771	203 aa		11.19	□□□□□ -0.62
CHRNA7-223	ENST00000637033	KHDC3L	Q587J8	217 aa		11.19	□□□□□ -0.62
CHRNA7-223	ENST00000637033	SSX7	Q7RTT5	188 aa		11.19	□□□□□ -0.62
CHRNA7-223	ENST00000637033	ADPRHL1	Q8NDY3	354 aa		11.19	□□□□□ -0.62
CHRNA7-223	ENST00000637033	TUBA4B	Q9H853	241 aa		11.19	□□□□□ -0.62
CHRNA7-223	ENST00000637033	UFSP2	Q9NUQ7	469 aa		11.19	□□□□□ -0.62
CHRNA7-223	ENST00000637033	TMEM38B	Q9NVV0	291 aa		11.19	□□□□□ -0.62
CHRNA7-223	ENST00000637033	FOXD3	Q9UJU5	478 aa	Predicted RBP	11.19	□□□□□ -0.62
CHRNA7-223	ENST00000637033	SLC22A20	A6NK97	555 aa		11.18	□□□□□ -0.62
CHRNA7-223	ENST00000637033	SOX15	O60248	233 aa		11.18	□□□□□ -0.62
CHRNA7-223	ENST00000637033	HOXA5	P20719	270 aa		11.18	□□□□□ -0.62
CHRNA7-223	ENST00000637033	SPINK9	Q5DT21	86 aa		11.18	□□□□□ -0.62
CHRNA7-223	ENST00000637033	C10orf128	Q5T292	105 aa		11.18	□□□□□ -0.62
CHRNA7-223	ENST00000637033	OR8G2P	Q6IF36	304 aa		11.18	□□□□□ -0.62
CHRNA7-223	ENST00000637033	ZNF600	Q6ZNG1	722 aa		11.18	□□□□□ -0.62
CHRNA7-223	ENST00000637033		Q6ZRM9	215 aa		11.18	□□□□□ -0.62
CHRNA7-223	ENST00000637033	LHFPL2	Q6ZUX7	228 aa		11.18	□□□□□ -0.62
CHRNA7-223	ENST00000637033	TCEAL7	Q9BRU2	100 aa		11.18	□□□□□ -0.62
CHRNA7-223	ENST00000637033	PLK3	Q9H4B4	646 aa		11.18	□□□□□ -0.62
CHRNA7-223	ENST00000637033	LRFN1	Q9P244	771 aa		11.18	□□□□□ -0.62
CHRNA7-223	ENST00000637033	C19orf25	Q9UFG5	118 aa	Predicted RBP	11.18	□□□□□ -0.62
CHRNA7-223	ENST00000637033	ERRFI1	Q9UJM3	462 aa	Predicted RBP	11.18	□□□□□ -0.62
CHRNA7-223	ENST00000637033	IGKV1-6	A0A0C4DH72	117 aa		11.18	□□□□□ -0.62
CHRNA7-223	ENST00000637033	CEBPZOS	A8MTT3	80 aa		11.18	□□□□□ -0.62
CHRNA7-223	ENST00000637033	IFNL4	K9M1U5	179 aa		11.18	□□□□□ -0.62
CHRNA7-223	ENST00000637033	GALR2	O43603	387 aa	Predicted RBP	11.18	□□□□□ -0.62
CHRNA7-223	ENST00000637033	SRF	P11831	508 aa		11.18	□□□□□ -0.62
CHRNA7-223	ENST00000637033	DTYMK	P23919	212 aa		11.18	□□□□□ -0.62
CHRNA7-223	ENST00000637033	SSR4	P51571	173 aa		11.18	□□□□□ -0.62
CHRNA7-223	ENST00000637033	RAB35	Q15286	201 aa		11.18	□□□□□ -0.62
CHRNA7-223	ENST00000637033	OR10D3	Q8NH80	312 aa		11.18	□□□□□ -0.62
CHRNA7-223	ENST00000637033	HLA-C	Q95604	372 aa		11.18	□□□□□ -0.62
CHRNA7-223	ENST00000637033	RPRM	Q9NS64	109 aa		11.18	□□□□□ -0.62
CHRNA7-223	ENST00000637033	DECR2	Q9NUI1	292 aa		11.18	□□□□□ -0.62
CHRNA7-223	ENST00000637033	SPEN	Q96T58	3664 aa	Known RBP	11.18	□□□□□ -0.62
CHRNA7-223	ENST00000637033	PATE3	B3GLJ2	98 aa		11.18	□□□□□ -0.62
CHRNA7-223	ENST00000637033	ETV2	O00321	342 aa	Predicted RBP	11.18	□□□□□ -0.62
CHRNA7-223	ENST00000637033	PPP1R2P9	O14990	202 aa		11.18	□□□□□ -0.62
CHRNA7-223	ENST00000637033	UMOD	P07911	640 aa		11.18	□□□□□ -0.62
CHRNA7-223	ENST00000637033	GPX4	P36969	197 aa	Predicted RBP	11.18	□□□□□ -0.62
CHRNA7-223	ENST00000637033	CD200	P41217	278 aa		11.18	□□□□□ -0.62
CHRNA7-223	ENST00000637033	CDX1	P47902	265 aa	Predicted RBP	11.18	□□□□□ -0.62
CHRNA7-223	ENST00000637033	C3AR1	Q16581	482 aa		11.18	□□□□□ -0.62
CHRNA7-223	ENST00000637033	HIKESHI	Q53FT3	197 aa		11.18	□□□□□ -0.62
CHRNA7-223	ENST00000637033	ABHD5	Q8WTS1	349 aa		11.18	□□□□□ -0.62
CHRNA7-223	ENST00000637033	RBMXL1	Q96E39	390 aa	Known RBP	11.18	□□□□□ -0.62
CHRNA7-223	ENST00000637033	TVP23C	Q96ET8	276 aa		11.18	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms